12 Commits

Author	SHA1	Message	Date
dr. M.S. (Matthijs) Berends	9e99e66f01	use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi	2023-02-06 11:57:22 +01:00
dr. M.S. (Matthijs) Berends	f0a2cdbf5e	update mo algorithm	2022-12-20 16:14:04 +01:00
dr. M.S. (Matthijs) Berends	b1b7534c78	incorporate Bartlett et al (2022)	2022-12-19 15:32:41 +01:00
dr. M.S. (Matthijs) Berends	23fe427cbc	Fixes for Salmonella	2022-12-17 14:31:33 +01:00
dr. M.S. (Matthijs) Berends	5f3a7694aa	microorganisms update, added Salmonella groups	2022-12-16 16:10:43 +01:00
dr. M.S. (Matthijs) Berends	8da2467209	updated taxonomy	2022-12-12 00:14:56 +01:00
dr. M.S. (Matthijs) Berends	56dad34e68	update prevalence with new phyla	2022-12-09 13:37:08 +01:00
dr. M.S. (Matthijs) Berends	6ad7857d39	fix missing R breakpoints	2022-10-29 14:15:23 +02:00
dr. M.S. (Matthijs) Berends	c2801ba7a1	new rsi_translation	2022-10-22 22:00:15 +02:00
Dr. Matthijs Berends	cd2acc4a29	New mo algorithm, prepare for 2.0	2022-10-05 09:12:22 +02:00
dr. M.S. (Matthijs) Berends	4cb1db4554	data export	2022-08-27 20:51:26 +02:00
dr. M.S. (Matthijs) Berends	3864ab2fb8	Feather and Parquet files	2022-08-26 22:25:15 +02:00