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AMR
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1392 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends aa2c0639d0 add confidence intervals (fixed #70), remove `combine_IR` 2022-10-20 16:08:01 +02:00
dr. M.S. (Matthijs) Berends 85e2fbe4a3 remove warnings from unit tests 2022-10-19 11:47:57 +02:00
Dr. Matthijs Berends fed3b6440f
Unit test fix 2022-10-19 08:14:38 +02:00
dr. M.S. (Matthijs) Berends f203928f7e coercion fixes 2022-10-19 06:59:36 +02:00
dr. M.S. (Matthijs) Berends 3fc39198d0 unit test fix 2022-10-18 23:03:16 +02:00
dr. M.S. (Matthijs) Berends e5e6d2200d fix add manual ab 2022-10-18 22:53:38 +02:00
dr. M.S. (Matthijs) Berends ad68b50ecd custom ab fix 2022-10-15 15:20:13 +02:00
Dr. Matthijs Berends 85ed7ea5f0
more robust install check 2022-10-14 15:45:20 +02:00
dr. M.S. (Matthijs) Berends 76bcd3528c move object assignment to AMR_env 2022-10-14 13:02:50 +02:00
dr. M.S. (Matthijs) Berends dfae4c7e7d fast-forward from pull 
Merge branch 'main' of https://github.com/msberends/AMR into main

# Conflicts:
#	DESCRIPTION
#	R/add_custom_antimicrobials.R
 2022-10-11 10:53:51 +02:00
dr. M.S. (Matthijs) Berends 33227a5d90 support ab selectors for manual AB codes 2022-10-11 10:49:55 +02:00
dr. M.S. (Matthijs) Berends 57d66cd9d0 doc fix 2022-10-10 21:38:39 +02:00
dr. M.S. (Matthijs) Berends 955f9d7020 documentation fix 2022-10-10 21:03:39 +02:00
dr. M.S. (Matthijs) Berends 3deeedc4b6 website fix 2022-10-10 20:21:41 +02:00
dr. M.S. (Matthijs) Berends 82e3198315 add `add_custom_antimicrobials()` 2022-10-10 20:20:39 +02:00
dr. M.S. (Matthijs) Berends 4fe90092c7 fix for `NA` in `as.ab()` 2022-10-10 15:44:59 +02:00
dr. M.S. (Matthijs) Berends 43c638d122 add `mo_current()` 2022-10-10 10:12:08 +02:00
dr. M.S. (Matthijs) Berends b753b84128 fix for mo type translation 2022-10-06 12:11:51 +02:00
dr. M.S. (Matthijs) Berends b9342d103e fix documentation 2022-10-06 11:33:30 +02:00
Dr. Matthijs Berends 0d8b098220
Vignette fix 2022-10-05 12:26:50 +02:00
dr. M.S. (Matthijs) Berends 369e7545da and yet another website fix 2022-10-05 10:17:53 +02:00
dr. M.S. (Matthijs) Berends bc44da0e38 website fix 2022-10-05 10:07:27 +02:00
dr. M.S. (Matthijs) Berends def9fc0d75 fix website 2022-10-05 09:33:21 +02:00
Dr. Matthijs Berends cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
dr. M.S. (Matthijs) Berends 63fe160322 new rsi_interpretation_history 2022-09-01 15:20:57 +02:00
Dr. Matthijs Berends a3b97a10a5
Update website 2022-08-30 22:17:14 +02:00
dr. M.S. (Matthijs) Berends 3fca703fbf new AMR distance function 2022-08-30 21:48:02 +02:00
dr. M.S. (Matthijs) Berends fbd5d32541 small fixes 2022-08-29 09:35:36 +02:00
dr. M.S. (Matthijs) Berends e7af5fc716 fix AMR vignette 2022-08-28 22:38:08 +02:00
Dr. Matthijs Berends e975a3043c
New tibbles, cleanup 
New tibbles, cleanup
 2022-08-28 21:52:45 +02:00
dr. M.S. (Matthijs) Berends 2ed5f13880 Fixes #57 2022-08-28 21:13:26 +02:00
dr. M.S. (Matthijs) Berends 1e4eaf23f2 unit tests 2022-08-28 20:49:04 +02:00
dr. M.S. (Matthijs) Berends 21b4552f5a unit test fix 2022-08-28 20:10:05 +02:00
dr. M.S. (Matthijs) Berends c44ddf272f fix for R <= 3.3 2022-08-28 19:34:04 +02:00
dr. M.S. (Matthijs) Berends 71db246d5c unit test fix 2022-08-28 19:17:12 +02:00
Dr. Matthijs Berends 0d67db4f32
Update check.yaml 2022-08-28 16:03:23 +02:00
Dr. Matthijs Berends 95f9563f58
Update check.yaml 2022-08-28 13:42:16 +02:00
Dr. Matthijs Berends 1a9bac8c64
Update check.yaml 2022-08-28 13:32:26 +02:00
Dr. Matthijs Berends 40d9658e06
Update check.yaml 2022-08-28 11:22:40 +02:00
dr. M.S. (Matthijs) Berends f781998904 amoxicillin interpretation fix 2022-08-28 11:17:53 +02:00
dr. M.S. (Matthijs) Berends 4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
dr. M.S. (Matthijs) Berends 4cb1db4554 data export 2022-08-27 20:51:26 +02:00
dr. M.S. (Matthijs) Berends 303d61b473 new tibble export 2022-08-27 20:49:37 +02:00
dr. M.S. (Matthijs) Berends 164886f50b new workflow files 2022-08-26 23:25:37 +02:00
dr. M.S. (Matthijs) Berends 3cef2ea286 restore LFS 2022-08-26 23:21:31 +02:00
dr. M.S. (Matthijs) Berends 3864ab2fb8 Feather and Parquet files 2022-08-26 22:25:15 +02:00
dr. M.S. (Matthijs) Berends 4da32e3d40 set up Git LFS for large files 2022-08-26 14:02:08 +02:00
dr. M.S. (Matthijs) Berends e05d0365a9 website update 2022-08-25 19:19:16 +02:00
dr. M.S. (Matthijs) Berends 5501cffbb0 website update 2022-08-25 19:18:48 +02:00
dr. M.S. (Matthijs) Berends d3000a9492 website update 2022-08-25 19:16:16 +02:00