Commit Graph
4 Commits
Author SHA1 Message Date
Claude 8fb640256a Update auto-generated Rd files after documentation rebuild
https://claude.ai/code/session_01FC43syPbzhGmKgrrVNHjnF
2026-04-30 12:39:09 +00:00
Claude 8d959f54cb Fix non-ASCII characters in antibiogram.R
Replace en/em dashes and non-breaking spaces with ASCII equivalents
to satisfy R CMD check portability requirement.

https://claude.ai/code/session_01FC43syPbzhGmKgrrVNHjnF
2026-04-30 12:26:32 +00:00
Claude ee6fab9b50 Fix version to 3.0.1.9055 and update CLAUDE.md version formula
Uses origin/${defaultbranch} (with a fetch) instead of the local
branch ref so the commit count is never stale after a merge.

https://claude.ai/code/session_01FC43syPbzhGmKgrrVNHjnF
2026-04-30 10:21:08 +00:00
Claude 623f6230f9 Add parallel computing support to antibiogram() and wisca() (#281)
For WISCA: simulations are distributed across (group, chunk) job pairs
via future.apply::future_lapply(), keeping all workers active even when
the regimen count is smaller than nbrOfWorkers(). Sequential fallback
with progress ticker is preserved when parallel = FALSE or workers = 1.

For grouped antibiograms: each group is processed by a separate worker,
mirroring the row-batch approach in as.sir().

Same gate pattern as as.sir() (PR #280): requires a non-sequential
future::plan() to be active; auto-upgrades to parallel = TRUE when a
parallel plan is detected; throws an informative error otherwise.

https://claude.ai/code/session_01FC43syPbzhGmKgrrVNHjnF
2026-04-30 10:12:36 +00:00