 dr. M.S. (Matthijs) Berends
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b228eb1536
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(v1.7.1.9016) only_treatable ab selectors
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2021-07-08 22:23:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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625a6fb304
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(v1.7.1.9015) removed S3 taxonomic_name again
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2021-07-07 20:34:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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ad10693a1a
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(v1.7.1.9014) rep() for S3 classes
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2021-07-06 16:35:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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16b4c74d44
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(v1.7.1.9013) temp fix for ggplot2 bug #4511
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2021-07-04 22:10:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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5b5741f681
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(v1.7.1.9011) subsetting taxonomy fix
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2021-07-04 15:26:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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3bd50710e8
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(v1.7.1.9010) fix for count_* and proportion_*
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2021-07-04 12:00:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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3e26929838
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(v1.7.1.9009) fix for ab class selectors
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2021-07-03 21:56:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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95050ee3e0
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(v1.7.1.9007) Updated antibiotics dataset, fixes #41
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2021-06-23 10:03:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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d04e83f494
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(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
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2021-06-22 12:16:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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c44d9392ca
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(v1.7.1.9004) more extensive unit tests
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2021-06-15 10:51:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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556bf0014d
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(v1.7.1.9003) unit test
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2021-06-14 22:37:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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99be4c7e7e
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(v1.7.1.9002) ab class selectors update
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2021-06-14 22:04:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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683a0e748a
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(v1.7.1.9001) unit tests
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2021-06-05 15:12:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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1908e7cc7a
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(v1.7.1.9000) ab_class update, unit tests
|
2021-06-04 21:07:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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7e70403efb
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(v1.7.1) New CRAN release
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2021-06-03 15:19:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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bef0f42f66
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(v1.7.0.9001) CLSI 2020 guideline
|
2021-06-01 15:33:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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f406319503
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(v1.7.0.9000) package size
|
2021-05-30 22:14:38 +02:00 |
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dr. M.S. (Matthijs) Berends
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a33c8a51a2
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v1.7.0
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2021-05-26 10:59:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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ac73a8d849
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v1.7.0
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2021-05-24 15:29:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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e5599bc694
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(v1.6.0.9065) unit tests
|
2021-05-24 11:01:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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4fbf9e1720
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(v1.6.0.9064) prepare new release
|
2021-05-24 09:34:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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a13fd98e8b
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(v1.6.0.9063) prepare new release
|
2021-05-24 09:00:11 +02:00 |
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dr. M.S. (Matthijs) Berends
|
06302d296a
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(v1.6.0.9062) code consistency
|
2021-05-24 00:06:28 +02:00 |
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dr. M.S. (Matthijs) Berends
|
07939b1a14
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(v1.6.0.9061) age() update
|
2021-05-23 23:11:16 +02:00 |
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dr. M.S. (Matthijs) Berends
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b210f1327c
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(v1.6.0.9055) support codecov again
|
2021-05-21 20:20:51 +02:00 |
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dr. M.S. (Matthijs) Berends
|
4a2a48b7c1
|
(v1.6.0.9052) unit tests
|
2021-05-20 11:42:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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04ef5b28e7
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(v1.6.0.9050) printing NA in custom_eucast_rules()
|
2021-05-20 10:10:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
9a2879cba9
|
(v1.6.0.9049) unit tests
|
2021-05-20 00:07:27 +02:00 |
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dr. M.S. (Matthijs) Berends
|
2413efd5c1
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(v1.6.0.9048) ab selectors overhaul
|
2021-05-19 22:55:42 +02:00 |
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dr. M.S. (Matthijs) Berends
|
6920c0be41
|
(v1.6.0.9047) filter_ab_class() fixes
|
2021-05-18 11:29:31 +02:00 |
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dr. M.S. (Matthijs) Berends
|
cfb7df823e
|
(v1.6.0.9044) betalactams() selector
|
2021-05-18 00:53:04 +02:00 |
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dr. M.S. (Matthijs) Berends
|
be49131ed7
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(v1.6.0.9043) translation update
|
2021-05-17 19:43:01 +02:00 |
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dr. M.S. (Matthijs) Berends
|
83fec69a03
|
(v1.6.0.9042) translation update
|
2021-05-17 11:26:12 +02:00 |
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dr. M.S. (Matthijs) Berends
|
916df6e90c
|
(v1.6.0.9041) filter_ab_class() fix
|
2021-05-16 10:50:00 +02:00 |
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dr. M.S. (Matthijs) Berends
|
aeea00881e
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(v1.6.0.9023) new unit test flow
|
2021-05-13 19:31:47 +02:00 |
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dr. M.S. (Matthijs) Berends
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655b813e99
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(v1.6.0.9022) unit test fix
|
2021-05-13 15:56:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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29dbfa2f49
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(v1.6.0.9021) join functions update
|
2021-05-12 18:15:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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3319fbae58
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(v1.6.0.9020) fix for skimr in dplyr 1.0.6
|
2021-05-06 15:17:11 +02:00 |
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dr. M.S. (Matthijs) Berends
|
0aca719929
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(v1.6.0.9018) unit tests
|
2021-05-04 15:20:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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5679ccdaf9
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(v1.6.0.9017) extra system codes
|
2021-05-04 12:47:33 +02:00 |
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dr. M.S. (Matthijs) Berends
|
f33e61bac7
|
(v1.6.0.9016) website update and c() fixes
|
2021-05-03 13:06:43 +02:00 |
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dr. M.S. (Matthijs) Berends
|
12a8d59869
|
(v1.6.0.9015) italicise_taxonomy
|
2021-05-03 10:47:32 +02:00 |
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dr. M.S. (Matthijs) Berends
|
e405de079c
|
(v1.6.0.9014) as.rsi() for numeric values
|
2021-04-30 13:18:48 +02:00 |
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dr. M.S. (Matthijs) Berends
|
a9fd4aa49f
|
(v1.6.0.9013) website update
|
2021-04-29 17:16:30 +02:00 |
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dr. M.S. (Matthijs) Berends
|
5e06b20d43
|
(v1.6.0.9012) unit tests
|
2021-04-27 11:28:17 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c5fff1c95c
|
(v1.6.0.9011) unit tests
|
2021-04-27 10:27:13 +02:00 |
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dr. M.S. (Matthijs) Berends
|
93683a4ae2
|
(v1.6.0.9010) big first_isolate() update
|
2021-04-26 23:57:37 +02:00 |
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dr. M.S. (Matthijs) Berends
|
5f9e7bd3ee
|
(v1.6.0.9009) key_antibiotics update
|
2021-04-23 16:13:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
70b803dbb6
|
(v1.6.0.9008) unlike, bugfix for col_mo naming
|
2021-04-23 09:59:36 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c6289c3fc3
|
(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
|
2021-04-20 10:46:17 +02:00 |
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dr. M.S. (Matthijs) Berends
|
de66eccf43
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(v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi
|
2021-04-16 14:59:57 +02:00 |
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dr. M.S. (Matthijs) Berends
|
24ac18a99d
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(v1.6.0.9005) unit test fix
|
2021-04-16 13:24:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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9842ef9660
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(v1.6.0.9004) unit test fix
|
2021-04-16 12:02:57 +02:00 |
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dr. M.S. (Matthijs) Berends
|
00d3e437a8
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(v1.6.0.9003) like() fix
|
2021-04-16 11:41:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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d277d58475
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(v1.6.0.9002) R-3.0 installation fix
|
2021-04-12 14:24:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
6ff5448192
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(v1.6.0.9001) support Inf for episodes
|
2021-04-12 12:35:13 +02:00 |
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dr. M.S. (Matthijs) Berends
|
7a3139f7cc
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(v1.6.0.9000) custom EUCAST rules
|
2021-04-07 08:37:42 +02:00 |
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dr. M.S. (Matthijs) Berends
|
551f99dc8f
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v1.6.0
|
2021-03-15 07:23:21 +01:00 |
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dr. M.S. (Matthijs) Berends
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4e0a9533ad
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(v1.5.0.9041) SNOMED update
|
2021-03-11 21:42:30 +01:00 |
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dr. M.S. (Matthijs) Berends
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8d6ceb6a15
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(v1.5.0.9040) removal of isolate_identifier
|
2021-03-08 09:44:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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a7c9b4c295
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(v1.5.0.9039) handle first isolates for missing antibiograms
|
2021-03-08 02:38:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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461793dc34
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(v1.5.0.9038) quick test
|
2021-03-08 01:24:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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a12975bc6e
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(v1.5.0.9037) quick test
|
2021-03-08 00:13:13 +01:00 |
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dr. M.S. (Matthijs) Berends
|
68163e3089
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(v1.5.0.9036) quick test
|
2021-03-07 22:45:05 +01:00 |
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dr. M.S. (Matthijs) Berends
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2f0fc3cab7
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(v1.5.0.9035) quick test
|
2021-03-07 22:15:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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450bbe5fb7
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(v1.5.0.9034) unit test fix
|
2021-03-07 21:16:45 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1bbf409fe5
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(v1.5.0.9033) as.rsi fix
|
2021-03-07 16:15:43 +01:00 |
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dr. M.S. (Matthijs) Berends
|
850c123de7
|
(v1.5.0.9032) All group generics for MICs
|
2021-03-07 13:52:39 +01:00 |
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dr. M.S. (Matthijs) Berends
|
91dd755cac
|
(v1.5.0.9031) math processing of MICs
|
2021-03-05 15:36:39 +01:00 |
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dr. M.S. (Matthijs) Berends
|
0d29bde693
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(v1.5.0.9030) as.ab() speed improvement
|
2021-03-05 10:32:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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0e0e3c4ffa
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(v1.5.0.9029) added missing families and orders
|
2021-03-05 01:31:46 +01:00 |
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dr. M.S. (Matthijs) Berends
|
ddf88345f1
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(v1.5.0.9028) Updated taxonomy until March 2021
|
2021-03-04 23:28:32 +01:00 |
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dr. M.S. (Matthijs) Berends
|
41f94cde97
|
(v1.5.0.9027) website update
|
2021-02-26 12:11:29 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1737d56ae4
|
(v1.5.0.9026) vignette update, support for GISA
|
2021-02-25 12:31:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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a673407904
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(v1.5.0.9025) big plot and ggplot generics update
|
2021-02-25 10:33:08 +01:00 |
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dr. M.S. (Matthijs) Berends
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31ceba5441
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(v1.5.0.9024) more speed improvements
|
2021-02-22 20:21:33 +01:00 |
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dr. M.S. (Matthijs) Berends
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0fdabff1ba
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(v1.5.0.9023) mo properties speed improvement
|
2021-02-21 23:19:40 +01:00 |
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dr. M.S. (Matthijs) Berends
|
062c49fca1
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(v1.5.0.9022) mo properties speed improvement
|
2021-02-21 22:56:35 +01:00 |
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dr. M.S. (Matthijs) Berends
|
5ef8cb41a7
|
(v1.5.0.9021) improve speed of %like%
|
2021-02-21 20:15:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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daa12ced2c
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(v1.5.0.9020) translation fix
|
2021-02-18 23:23:14 +01:00 |
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dr. M.S. (Matthijs) Berends
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
|
2021-02-17 10:58:13 +01:00 |
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dr. M.S. (Matthijs) Berends
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2dd0656355
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(v1.5.0.9018) fix unit tests
|
2021-02-09 12:28:15 +01:00 |
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dr. M.S. (Matthijs) Berends
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cb404492b2
|
(v1.5.0.9017) unit testing
|
2021-02-08 21:09:36 +01:00 |
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dr. M.S. (Matthijs) Berends
|
4a84894f79
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(v1.5.0.9016) only_rsi_columns update, documentation
|
2021-02-08 14:18:42 +01:00 |
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dr. M.S. (Matthijs) Berends
|
8fda473e49
|
(v1.5.0.9015) unit test fix, grouped first isolates
|
2021-02-04 16:48:16 +01:00 |
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dr. M.S. (Matthijs) Berends
|
2eca8c3f01
|
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
|
2021-02-02 23:57:35 +01:00 |
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dr. M.S. (Matthijs) Berends
|
20d638c193
|
(v1.5.0.9013) updated tibble printing colours
|
2021-01-28 16:09:30 +01:00 |
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dr. M.S. (Matthijs) Berends
|
331c1f6508
|
(v1.5.0.9012) ampc_cephalosporin_resistance for I
|
2021-01-25 21:58:00 +01:00 |
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dr. M.S. (Matthijs) Berends
|
24eb4453db
|
(v1.5.0.9011) small dosage update
|
2021-01-24 23:27:11 +01:00 |
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dr. M.S. (Matthijs) Berends
|
286eaa9699
|
(v1.5.0.9010) MDRO vignette update, get_episode for < day
|
2021-01-24 14:48:56 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1a88caa119
|
(v1.5.0.9009) unit test fixes
|
2021-01-22 10:55:07 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1ba44776a1
|
(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
|
2021-01-22 10:20:41 +01:00 |
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dr. M.S. (Matthijs) Berends
|
27f084d819
|
(v1.5.0.9007) updated unit tests
|
2021-01-18 18:45:43 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
4eab095306
|
(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
e95218c0d1
|
(v1.5.0.9005) custom MDRO guideline
|
2021-01-17 10:35:21 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
e699de955c
|
(v1.5.0.9004) custom MDRO guideline
|
2021-01-17 00:26:48 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
7ebc534ccd
|
(v1.5.0.9003) verbose output of mdro()
|
2021-01-15 22:44:52 +01:00 |
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dr. M.S. (Matthijs) Berends
|
6745f3fb17
|
(v1.5.0.9002) doc update
|
2021-01-14 15:51:41 +01:00 |
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dr. M.S. (Matthijs) Berends
|
bc00470dca
|
(v1.5.0.9001) more informative argument errors
|
2021-01-14 14:41:44 +01:00 |
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dr. M.S. (Matthijs) Berends
|
d014955ce0
|
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
|
2021-01-12 22:08:04 +01:00 |