 dr. M.S. (Matthijs) Berends
|
ade9f8bafd
|
(v1.4.0.9004) bugfix
|
2020-10-21 11:50:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2ef7dfc8a3
|
(v1.4.0.9003) CoNS update
|
2020-10-20 21:00:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ddae8085e1
|
(v1.4.0.9002) bugfix
|
2020-10-19 20:44:45 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4e9ccb4435
|
(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
|
2020-10-19 17:09:19 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
28e77680c5
|
(v1.4.0) matching score update
|
2020-10-08 11:16:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c04dc852cf
|
(v1.3.0.9039) lifecycle updates, added excess kurtosis
|
2020-10-04 21:02:16 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
baf510183c
|
(v1.3.0.9038) prefinal 1.4.0
|
2020-10-04 19:26:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3136bc54aa
|
(v1.3.0.9037) pre-release
|
2020-09-30 10:54:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ac1c78c793
|
(v1.3.0.9036) documentation fix
|
2020-09-30 10:24:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4e0374af29
|
(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
|
2020-09-29 23:35:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
68e6e1e329
|
(v1.3.0.9034) eucast_rules summary fix
|
2020-09-29 10:40:25 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
36ec8b0d81
|
(v1.3.0.9033) skimr fix
|
2020-09-28 11:00:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
519aada54f
|
(v1.3.0.9032) support skimr
|
2020-09-28 01:08:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
22f6ceb3e4
|
(v1.3.0.9031) matching score update
|
2020-09-26 16:51:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
050a9a04fb
|
(v1.3.0.9030) matching score update
|
2020-09-26 16:26:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9667c2994f
|
(v1.3.0.9029) eucast rules fix, unique()
|
2020-09-25 14:44:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1d982a82b4
|
(v1.3.0.9028) eucast fix
|
2020-09-24 12:38:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
027215ed94
|
(v1.3.0.9027) unit tests
|
2020-09-24 00:50:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c19095a3d5
|
(v1.3.0.9026) eucast expert rules 3.2
|
2020-09-24 00:30:11 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2f0186ace2
|
(v1.3.0.9024) optimalisation
|
2020-09-19 12:57:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d049cce69b
|
(v1.3.0.9023) optimalisation
|
2020-09-19 11:54:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4e40e42011
|
(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
|
2020-09-18 16:05:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
89401ede9f
|
(v1.3.0.9021) typo
|
2020-09-14 20:41:19 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ab60f613aa
|
(v1.3.0.9020) fix for uncertainty in as.mo()
|
2020-09-14 19:41:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
354c606d6a
|
(v1.3.0.9019) small fix
|
2020-09-14 14:08:07 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7b6dd676f7
|
(v1.3.0.9018) language corrections
|
2020-09-14 12:21:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0f6760d427
|
(v1.3.0.9017) small fix
|
2020-09-12 13:54:21 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3ff871afeb
|
(v1.3.0.9016) mo_uncertainties() overhaul
|
2020-09-12 08:49:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
68e9cb78e9
|
(v1.3.0.9015) as.mo() speedup for valid taxonomic names
|
2020-09-03 20:59:21 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c4b87fe241
|
(v1.3.0.9014) as.mo() speed improvement
|
2020-09-03 12:31:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
74a172ef55
|
(v1.3.0.9010) S3 extensions without dependencies
|
2020-08-28 21:55:47 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
81af0b001c
|
(v1.3.0.9009) documentation update
|
2020-08-26 16:13:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9b8db57c65
|
(v1.3.0.9008) also tibble printing for ab
|
2020-08-26 15:34:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5e45fdcf2a
|
(v1.3.0.9007) tibble printing
|
2020-08-26 11:33:54 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c8c8bb4e3a
|
(v1.3.0.9006) website update
|
2020-08-21 11:40:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
dab017a50f
|
(v1.3.0.9004) data sets, as.disk() improvement
|
2020-08-16 21:38:42 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e73f0e211c
|
(v1.3.0.9003) as.rsi() speed improvement
|
2020-08-15 12:54:47 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
08d62bb5d5
|
(v1.3.0.9002) intrinsic_resistant data set
|
2020-08-14 13:36:10 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7d16bec21f
|
(v1.3.0.9001) website update
|
2020-08-10 12:46:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0d9602a6a9
|
(v1.3.0.9000) support across() in as.rsi()
|
2020-08-10 11:44:58 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c5f7294381
|
(v1.3.0) skip more CRAN tests
|
2020-07-31 10:50:08 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c8edcb7439
|
(v1.3.0) small fixes
|
2020-07-30 15:15:52 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
8ff46eefe9
|
(v1.3.0) small MIC fix
|
2020-07-30 12:37:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ea4e5e5b81
|
(v1.3.0) v1.3.0
|
2020-07-29 13:48:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
de0f7b8950
|
(v1.2.0.9040) conserve_capped_values for as.rsi()
|
2020-07-29 12:47:58 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e7def0aa4c
|
(v1.2.0.9039) conserve_capped_values for as.rsi()
|
2020-07-29 11:46:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
453f7f210b
|
(v1.2.0.9038) CLSI 2019 fix
|
2020-07-29 10:33:47 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1b65d76cfb
|
(v1.2.0.9037) survey on website
|
2020-07-28 18:39:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ab2b359e6b
|
(v1.2.0.9036) unit test fix
|
2020-07-22 12:29:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
09fba38ea6
|
(v1.2.0.9035) as.mo() speed improvement
|
2020-07-22 10:24:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6ab468362d
|
(v1.2.0.9034) code cleaning
|
2020-07-13 09:17:24 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c0cf7ab02b
|
(v1.2.0.9033) speed improvement mdro(), filter_ab_class()
|
2020-07-12 11:43:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1d66b5c43c
|
(v1.2.0.9032) Permanently move to GitHub
|
2020-07-09 20:07:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cf3c3ee8f7
|
(v1.2.0.9029) GitHub actions
|
2020-07-08 22:55:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
76fc8e1b14
|
(v1.2.0.9026) move to github
|
2020-07-08 14:48:06 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2134fc76e2
|
(v1.2.0.9025) AMR calculation speed improvement
|
2020-07-03 12:14:41 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
46cf423eab
|
(v1.2.0.9024) AMR calculation speed improvement
|
2020-07-03 10:51:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
152ac5bcad
|
(v1.2.0.9023) ab_from_text() improvement
|
2020-07-02 21:12:52 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
298e67a45b
|
(v1.2.0.9022) as.ab() improvement
|
2020-07-01 16:21:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
afc660dc33
|
(v1.2.0.9021) only progressbar in interactive sessions
|
2020-07-01 11:51:26 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cc6ce0a938
|
(v1.2.0.9020) ab_from_text() improvement
|
2020-07-01 11:23:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
329a0eb0b6
|
(v1.2.0.9019) ab_from_text() dose and administration
|
2020-07-01 11:07:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
240d817b4e
|
(v1.2.0.9018) ab_from_text() improvement
|
2020-06-26 13:15:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4f6f056077
|
(v1.2.0.9017) ab_from_text() improvement
|
2020-06-26 12:31:27 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b31003c0b6
|
(v1.2.0.9016) fix in rsi_calc()
|
2020-06-26 10:21:22 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
033ca49817
|
(v1.2.0.9015) ab_from_text()
|
2020-06-25 19:20:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
344bbd57f4
|
(v1.2.0.9014) ab_from_text()
|
2020-06-25 17:34:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
8a66e475d7
|
(v1.2.0.9013) unit test fix
|
2020-06-22 13:18:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
779a4e8348
|
(v1.2.0.9012) mo_domain(), improved error handling
|
2020-06-22 12:18:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
93a158aebd
|
(v1.2.0.9011) mo_domain(), improved error handling
|
2020-06-22 11:18:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e88d7853f5
|
(v1.2.0.9010) documentation fix
|
2020-06-17 21:35:10 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f18389d5d6
|
(v1.2.0.9009) pkg dependency fix
|
2020-06-17 16:29:10 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ac12392da3
|
(v1.2.0.9008) ab_class improvement
|
2020-06-17 15:14:37 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c4d7412f36
|
(v1.2.0.9007) Tidyverse selections
|
2020-06-17 01:39:30 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4f94e1312f
|
(v1.2.0.9006) improve auto col-determination
|
2020-06-11 20:03:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
8b692ecfcf
|
(v1.2.0.9004) rsi_df() fix for groups
|
2020-06-09 16:18:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
40221e5244
|
(v1.2.0.9003) better terminal colour support
|
2020-06-05 13:56:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2c8d600914
|
(v1.2.0.9002) fix for joins
|
2020-06-03 14:33:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5dc4c96b7d
|
(v1.2.0.9001) filter_ab_class() update
|
2020-06-03 11:48:00 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
02d07b9fb3
|
(v1.2.0.9000) eucast_rules() fix for tibbles
|
2020-06-02 16:05:56 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b44e2c9202
|
v1.2.0
|
2020-05-28 16:48:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d9a4b0bcaf
|
(v1.1.0.9021) 1st isolates update
|
2020-05-28 10:51:56 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
86d44054f0
|
(v1.1.0.9020) updated taxonomy
|
2020-05-27 16:37:49 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ae1969b941
|
(v1.1.0.9019) mo_source fix
|
2020-05-25 01:01:14 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f5ff2e6634
|
(v1.1.0.9018) as.ab() update, added ab_url()
|
2020-05-22 20:29:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e467cc103e
|
(v1.1.0.9017) as.ab() update, added ab_url()
|
2020-05-22 20:15:19 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1b1e243d14
|
(v1.1.0.9016) small fix
|
2020-05-21 12:28:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
743f9a5364
|
(v1.1.0.9015) new default eucast_rules
|
2020-05-20 12:00:17 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5216d2b520
|
(v1.1.0.9014) lose dependencies
|
2020-05-19 14:16:45 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cb1814f5ff
|
(v1.1.0.9013) lose dependencies
|
2020-05-19 13:18:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
19703eb5d3
|
(v1.1.0.9012) lose dependencies
|
2020-05-19 12:08:49 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
218fd08097
|
(v1.1.0.9011) lose dependencies
|
2020-05-18 13:59:34 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d659c9baef
|
(v1.1.0.9010) lose dependencies
|
2020-05-18 11:09:02 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bf0402a653
|
(v1.1.0.9009) lose dependencies
|
2020-05-18 10:30:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f68d71a5e0
|
(v1.1.0.9007) lose dependencies
|
2020-05-16 21:40:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
29609a0e2c
|
(v1.1.0.9006) lose dependencies
|
2020-05-16 20:42:45 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
df2456b91f
|
(v1.1.0.9005) lose dependencies
|
2020-05-16 20:08:21 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7f3da74b17
|
(v1.1.0.9004) lose dependencies
|
2020-05-16 13:05:47 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5bdece1f9d
|
(v1.1.0.9000) CI fix
|
2020-04-30 09:05:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b040185269
|
(v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI
|
2020-04-29 14:33:44 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c2ffbd9f95
|
(v1.0.1.9009) prepare for next release
|
2020-04-15 11:30:28 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4be54d608c
|
(v1.0.1.9008) RIVM abbreviations for drugs
|
2020-04-14 20:38:09 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cde65141d9
|
(v1.0.1.9007) small bugfix
|
2020-04-14 15:10:09 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7a6f819232
|
(v1.0.1.9006) added generic CLSI rules
|
2020-04-14 14:12:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d1cb7d3b6f
|
(v1.0.1.9005) as.mo() improvements
|
2020-04-13 21:09:56 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
219cff403f
|
(v1.0.1.9004) Support dplyr 1.0.0
|
2020-03-14 14:05:43 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
77656a676c
|
(v1.0.1.9002) PCA unit tests
|
2020-03-08 11:18:59 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
9fc858f208
|
(v1.0.1.9001) PCA unit tests
|
2020-03-08 09:12:11 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
fa0d9c58d9
|
(v1.0.1.9000) first PCA implementation
|
2020-03-07 21:48:21 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
0d5e78b2cf
|
(v1.0.0.9007) small doc fix
|
2020-02-22 17:03:47 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ea32e9916a
|
(v1.0.0.9005) info printing only in interactive mode
|
2020-02-21 21:13:38 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
47fe8b7820
|
(v1.0.0.9004) add example_isolaten_unclean
|
2020-02-21 16:05:19 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
bb3728f023
|
(v1.0.0.9003) prepare for short update
|
2020-02-21 13:13:34 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
6408911922
|
(v1.0.0.9002) fix lintr
|
2020-02-20 20:31:42 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
bdb26f624f
|
(v1.0.0.9001) add uti to as.rsi()
|
2020-02-20 17:21:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6184a0fb8
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(v0.9.0.9029) add uti to as.rsi()
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2020-02-20 13:19:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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c8981a563e
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(v0.9.0.9027) documentation fix
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2020-02-17 15:07:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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5e2b294351
|
(v0.9.0.9026) update documentation
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2020-02-17 14:38:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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11f00f8a0a
|
(v0.9.0.9025) update as.rsi documentation
|
2020-02-16 22:43:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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c7a93af3d0
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(v0.9.0.9024) global vars fix
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2020-02-14 20:03:43 +01:00 |
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dr. M.S. (Matthijs) Berends
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9b8b02960e
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(v0.9.0.9023) EUCAST 2020 guidelines
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2020-02-14 19:54:13 +01:00 |
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dr. M.S. (Matthijs) Berends
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5a98e6b777
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(v0.9.0.9022) inheritance fix
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2020-02-10 14:18:15 +01:00 |
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dr. M.S. (Matthijs) Berends
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b4356a299c
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(v0.9.0.9021) inheritance fix
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2020-02-10 12:25:02 +01:00 |
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dr. M.S. (Matthijs) Berends
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c7a76ba713
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(v0.9.0.9020) as.mo() improvement
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2020-02-09 22:04:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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4e1c16c5a5
|
(v0.9.0.9019) website update
|
2020-02-01 15:09:36 +01:00 |
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dr. M.S. (Matthijs) Berends
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f152ab9a48
|
(v0.9.0.9018) Remove mo_history
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2020-01-31 23:27:38 +01:00 |
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dr. M.S. (Matthijs) Berends
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1b80773c22
|
(v0.9.0.9017) documentation fix
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2020-01-27 19:30:26 +01:00 |
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dr. M.S. (Matthijs) Berends
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a13c62e6e8
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(v0.9.0.9016) Support SNOMED codes
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2020-01-27 19:14:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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9a3891efe4
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(v0.9.0.9014) Machine reading guidelines
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2020-01-27 11:05:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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423d1d3c41
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(v0.9.0.9013) Support for LOINC codes
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2020-01-26 20:38:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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449d9bde35
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(v0.9.0.9012) Support for LOINC codes
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2020-01-26 20:20:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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64f5ceef03
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(v0.9.0.9009) antibiotics data set update
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2020-01-08 11:30:33 +01:00 |
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dr. M.S. (Matthijs) Berends
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ced1a7b7fa
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(v0.9.0.9008) Happy new year! Add lifecycles
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2020-01-05 17:22:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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db5dfff0ca
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(v0.9.0.9006) added CITATION file
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2019-12-22 11:43:38 +01:00 |
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dr. M.S. (Matthijs) Berends
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ba3ce77f02
|
(v0.9.0.9005) as.mo for G. species
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2019-12-21 10:56:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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2db2a2458a
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(v0.9.0.9003) as.mo() speedup for fullnames
|
2019-12-20 15:05:58 +01:00 |
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dr. M.S. (Matthijs) Berends
|
a7e538e562
|
(v0.9.0) website fixes
|
2019-11-30 13:31:12 +01:00 |
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dr. M.S. (Matthijs) Berends
|
56ce9bf665
|
(v0.9.0) website fixes
|
2019-11-30 12:01:50 +01:00 |
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dr. M.S. (Matthijs) Berends
|
bb2ed55842
|
(v0.9.0) v0.9.0
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2019-11-29 19:43:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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9feef53bde
|
(v0.8.0.9037) complete documentation rewrite
|
2019-11-28 23:00:37 +01:00 |
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dr. M.S. (Matthijs) Berends
|
c5f00f4a9f
|
(v0.8.0.9036) complete documentation rewrite
|
2019-11-28 22:32:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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7c28b392b1
|
(v0.8.0.9035) add more mo codes
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2019-11-24 22:48:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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e53cc4990c
|
(v0.8.0.9034) add cid to antivirals
|
2019-11-23 12:39:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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267320f15f
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(v0.8.0.9033) antivirals data set, cleanup
|
2019-11-18 12:10:47 +01:00 |
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dr. M.S. (Matthijs) Berends
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67f3f4387b
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(v0.8.0.9032) fix regex error
|
2019-11-15 16:50:46 +01:00 |
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dr. M.S. (Matthijs) Berends
|
09e2730b53
|
(v0.8.0.9031) as.mo() improvements
|
2019-11-15 15:25:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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248b45da71
|
(v0.8.0.9030) depend on tidyr >= 1.0.0
|
2019-11-11 10:46:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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d22834c5b8
|
(v0.8.0.9029) cleanup
|
2019-11-10 15:50:18 +01:00 |
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dr. M.S. (Matthijs) Berends
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54b6322056
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(v0.8.0.9028) examples fix
|
2019-11-10 13:17:20 +01:00 |
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dr. M.S. (Matthijs) Berends
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59ededa8dc
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(v0.8.0.9027) adding susceptibility() and resistance()
|
2019-11-10 12:16:56 +01:00 |
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dr. M.S. (Matthijs) Berends
|
ef640add2d
|
(v0.8.0.9021) update vignettes
|
2019-11-09 11:33:22 +01:00 |
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dr. M.S. (Matthijs) Berends
|
e2d05cb1b0
|
(v0.8.0.9017) keywords update
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2019-11-06 14:43:23 +01:00 |
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dr. M.S. (Matthijs) Berends
|
a1fd2cd98a
|
(v0.8.0.9014) unit test update
|
2019-11-05 22:23:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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2560aa1a53
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(v0.8.0.9013) unit test update
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2019-11-05 21:52:58 +01:00 |
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dr. M.S. (Matthijs) Berends
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5345d2759a
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(v0.8.0.9012) mdro improvement
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2019-11-05 11:28:52 +01:00 |
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dr. M.S. (Matthijs) Berends
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fe606e287b
|
(v0.8.0.9011) col guess update
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2019-11-04 12:08:08 +01:00 |
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dr. M.S. (Matthijs) Berends
|
9060233953
|
(v0.8.0.9010) mdro bug fix
|
2019-11-04 11:35:34 +01:00 |
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dr. M.S. (Matthijs) Berends
|
0bb531f3e0
|
(v0.8.0.9009) unit test
|
2019-11-03 22:41:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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29e448883d
|
(v0.8.0.9008) new verbose mode for MDROs
|
2019-11-03 22:24:42 +01:00 |
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dr. M.S. (Matthijs) Berends
|
09c4b04cd0
|
(v0.8.0.9007) Enterobacterales order
|
2019-10-30 23:02:50 +01:00 |
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dr. M.S. (Matthijs) Berends
|
7ff2ad8188
|
(v0.8.0.9006) small typos
|
2019-10-27 00:31:59 +02:00 |
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dr. M.S. (Matthijs) Berends
|
412077a6f2
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(v0.8.0.9005) fix unit tests
|
2019-10-26 22:21:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
d2e8249edd
|
(v0.8.0.9004) added MDR guideline by Magiorakos et al.
|
2019-10-26 21:56:41 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c01dc8a5b7
|
(v0.8.0.9003) printing fix for AB columns
|
2019-10-23 15:44:11 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3e5ab53209
|
(v0.8.0.9002) eucast_rules() fix for S. maltophilia
|
2019-10-23 14:48:25 +02:00 |
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dr. M.S. (Matthijs) Berends
|
666126cd5e
|
(v0.8.0.9001) guideline text on as.rsi()
|
2019-10-21 14:12:28 +02:00 |
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dr. M.S. (Matthijs) Berends
|
10e6b225e7
|
(v0.7.1.9107) v0.8.0
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2019-10-15 14:35:23 +02:00 |
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dr. M.S. (Matthijs) Berends
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00cdb498a0
|
(v0.7.1.9102) lintr
|
2019-10-11 17:21:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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c8f6b97847
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(v0.7.1.9100) bug_drug speed, MIC levels
|
2019-10-08 22:21:33 +02:00 |
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dr. M.S. (Matthijs) Berends
|
683d226fd3
|
Update guess_ab_col.R
|
2019-10-08 08:02:19 +00:00 |
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dr. M.S. (Matthijs) Berends
|
f479dfce60
|
(v0.7.1.9097) mdro() examples fix
|
2019-10-07 14:57:27 +02:00 |
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dr. M.S. (Matthijs) Berends
|
4e9c4c1b4e
|
(v0.7.1.9096) German guideline for mdro()
|
2019-10-07 14:32:06 +02:00 |
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dr. M.S. (Matthijs) Berends
|
1e260d85c8
|
(v0.7.1.9095) get_column_abx() fix
|
2019-10-06 22:19:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3d5692219e
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(v0.7.1.9094) get_column_abx() improvement
|
2019-10-06 21:44:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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b6653a620a
|
(v0.7.1.9093) as.ab() fix
|
2019-10-06 21:07:38 +02:00 |
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dr. M.S. (Matthijs) Berends
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8bc4081b03
|
(v0.7.1.9092) as.ab() improvements
|
2019-10-04 15:36:12 +02:00 |
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dr. M.S. (Matthijs) Berends
|
edb599ae0b
|
(v0.7.1.9091) percentage from clean pkg
|
2019-09-30 16:45:36 +02:00 |
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dr. M.S. (Matthijs) Berends
|
b39e7feae6
|
(v0.7.1.9090) factor levels of mdr_tb
|
2019-09-26 21:58:06 +02:00 |
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dr. M.S. (Matthijs) Berends
|
b9f01d686e
|
(v0.7.1.9089) eucast file update
|
2019-09-25 22:37:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
99d0fe76dd
|
(v0.7.1.9088) bug_drug improvement
|
2019-09-25 15:43:22 +02:00 |
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dr. M.S. (Matthijs) Berends
|
04cd0d25db
|
(v0.7.1.9087) small fix
|
2019-09-23 23:09:50 +02:00 |
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dr. M.S. (Matthijs) Berends
|
38336d7408
|
(v0.7.1.9086) small fix
|
2019-09-23 23:00:18 +02:00 |
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dr. M.S. (Matthijs) Berends
|
ad5f211a8f
|
(v0.7.1.9085) Salmonella fix
|
2019-09-23 21:24:37 +02:00 |
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dr. M.S. (Matthijs) Berends
|
76dc948067
|
(v0.7.1.9084) CI fix
|
2019-09-23 20:55:54 +02:00 |
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dr. M.S. (Matthijs) Berends
|
8ce252fbc5
|
(v0.7.1.9083) LIS code improvement
|
2019-09-23 17:32:05 +02:00 |
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dr. M.S. (Matthijs) Berends
|
a8c6b8f9c4
|
(v0.7.1.9082) CI fix
|
2019-09-23 14:37:24 +02:00 |
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dr. M.S. (Matthijs) Berends
|
64d9829030
|
(v0.7.1.9081) bug_drug fixes
|
2019-09-23 13:53:50 +02:00 |
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dr. M.S. (Matthijs) Berends
|
66d405ff57
|
(v0.7.1.9080) new LIS codes
|
2019-09-22 17:19:59 +02:00 |
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dr. M.S. (Matthijs) Berends
|
57b0bd92a0
|
(v0.7.1.9079) small fixes
|
2019-09-22 12:41:45 +02:00 |
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dr. M.S. (Matthijs) Berends
|
46b61e9a70
|
(v0.7.1.9078) unit tests
|
2019-09-20 14:50:02 +02:00 |
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dr. M.S. (Matthijs) Berends
|
40e6b3e8f6
|
(v0.7.1.9077) mo codes fix
|
2019-09-20 14:18:29 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3596adb295
|
(v0.7.1.9076) mo codes
|
2019-09-20 12:33:05 +02:00 |
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dr. M.S. (Matthijs) Berends
|
e2aa4f996b
|
(v0.7.1.9075) new microorganism codes
|
2019-09-18 15:46:09 +02:00 |
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dr. M.S. (Matthijs) Berends
|
f553a08a7b
|
(v0.7.1.9074) CI updates
|
2019-09-16 12:00:56 +02:00 |
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dr. M.S. (Matthijs) Berends
|
398c5bdc4f
|
(v0.7.1.9073) as.mo() self-learning algorithm
|
2019-09-15 22:57:30 +02:00 |
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dr. M.S. (Matthijs) Berends
|
cd178ee569
|
(v0.7.1.9072) key_antibiotics() for foreign systems
|
2019-09-12 15:08:53 +02:00 |
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dr. M.S. (Matthijs) Berends
|
b5d2a08401
|
(v0.7.1.9071) p_symbol()
|
2019-09-03 09:47:39 +02:00 |
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dr. M.S. (Matthijs) Berends
|
06b6266366
|
(v0.7.1.9070) na.rm for age(), age_groups()
|
2019-09-02 15:17:41 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c7be72f0ce
|
(v0.7.1.9069) documentation update
|
2019-09-01 13:16:57 +02:00 |
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dr. M.S. (Matthijs) Berends
|
88ee1b7268
|
(v0.7.1.9068) gramstain to freq()
|
2019-08-30 14:50:56 +02:00 |
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dr. M.S. (Matthijs) Berends
|
34a82d091e
|
(v0.7.1.9067) honor info
|
2019-08-28 17:12:48 +02:00 |
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dr. M.S. (Matthijs) Berends
|
e2b78fa428
|
(v0.7.1.9066) bug-drug fix
|
2019-08-27 23:00:00 +02:00 |
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dr. M.S. (Matthijs) Berends
|
248638ad91
|
(v0.7.1.9065) bug-drug fix
|
2019-08-27 22:41:09 +02:00 |
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dr. M.S. (Matthijs) Berends
|
f3276592b7
|
(v0.7.1.9064) bug-drug fix
|
2019-08-27 19:15:04 +02:00 |
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dr. M.S. (Matthijs) Berends
|
93be16484b
|
(v0.7.1.9063) septic_patients -> example_isolates
|
2019-08-27 16:45:42 +02:00 |
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dr. M.S. (Matthijs) Berends
|
7a6fce4eb8
|
(v0.7.1.9062) mo/ab assignment improvements
|
2019-08-26 16:02:03 +02:00 |
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dr. M.S. (Matthijs) Berends
|
13d4fef801
|
(v0.7.1.9061) mo_property improvement
|
2019-08-26 10:03:37 +02:00 |
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dr. M.S. (Matthijs) Berends
|
05dcb43660
|
(v0.7.1.9060) globals
|
2019-08-25 23:25:12 +02:00 |
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dr. M.S. (Matthijs) Berends
|
e46cb0399f
|
(v0.7.1.9059) bug_drug_combinations
|
2019-08-25 22:53:22 +02:00 |
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dr. M.S. (Matthijs) Berends
|
7c069145ac
|
(v0.7.1.9058) as.mo() improvement
|
2019-08-20 11:40:54 +02:00 |
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dr. M.S. (Matthijs) Berends
|
04d49a62af
|
(v0.7.1.9057) get_column_abx() improvement
|
2019-08-15 17:09:27 +02:00 |
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dr. M.S. (Matthijs) Berends
|
920212e815
|
(v0.7.1.9056) mo and ab subsetting
|
2019-08-14 14:57:06 +02:00 |
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dr. M.S. (Matthijs) Berends
|
7108454ba5
|
(v0.7.1.9055) algorithm improvements
|
2019-08-13 16:15:08 +02:00 |
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dr. M.S. (Matthijs) Berends
|
5f2733349e
|
(v0.7.1.9038) mo algorithm inprovements
|
2019-08-12 19:07:15 +02:00 |
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dr. M.S. (Matthijs) Berends
|
c44c5e3913
|
(v0.7.1.9037) CI and global env fix
|
2019-08-12 15:34:49 +02:00 |
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dr. M.S. (Matthijs) Berends
|
bd252a2984
|
(v0.7.1.9036) preserve ab/mo classes in subsetting
|
2019-08-12 14:48:09 +02:00 |
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dr. M.S. (Matthijs) Berends
|
1d423cca89
|
(v0.7.1.9035) cephalosporins and unit tests
|
2019-08-11 19:07:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3f5828e74a
|
(v0.7.1.9034) mo.codes fix for Dracunculus spp.
|
2019-08-09 23:45:26 +02:00 |
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dr. M.S. (Matthijs) Berends
|
6598c5615d
|
(v0.7.1.9033) 5000 new fungi
|
2019-08-09 23:22:10 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6a349bf757
|
(v0.7.1.9032) eucast_rules() improvements
|
2019-08-09 14:28:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1ce4b72dd2
|
(v0.7.1.9031) include_unknown for first_isolate()
|
2019-08-08 22:39:42 +02:00 |
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dr. M.S. (Matthijs) Berends
|
22a206ffd8
|
(v0.7.1.9030) eucast_rules() fix
|
2019-08-08 15:52:07 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bfa92eb166
|
(v0.7.1.9028) predict update
|
2019-08-07 15:58:32 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
90c874025a
|
(v0.7.1.9027) tibble printing
|
2019-08-07 15:37:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
96b334d7cc
|
website update
|
2019-08-06 14:46:30 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3a1f960f89
|
(v0.7.1.9024) eucast_rules() fix, new MOs
|
2019-08-06 14:39:22 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
85b62aaf8f
|
(v0.7.1.9023) wrong percentage in as.mo()
|
2019-08-04 17:41:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d6ab3896a1
|
(v0.7.1.9021) CI fix for resistance_predict
|
2019-08-04 10:48:41 +02:00 |
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dr. M.S. (Matthijs) Berends
|
2a62c3d62a
|
(v0.7.1.9018) deps
|
2019-07-30 13:12:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
ec0ca20dee
|
(v0.7.1.9017) deps
|
2019-07-29 21:20:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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b7e2d7b9b8
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(v0.7.1.9016) deps
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2019-07-29 17:34:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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240f03a672
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(v0.7.1.9015) Remove freq()
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2019-07-29 13:33:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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9ac5a34b36
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(v0.7.1.9014) MO codes update
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2019-07-16 16:14:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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c652c6913f
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(v0.7.1.9013) guess_mo_ab speed improvement
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2019-07-11 13:39:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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68230d0712
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(v0.7.1.90012) mo_shortname fix
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2019-07-10 21:36:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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b452de2fe4
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(v0.7.1.9010) eucast informative text in verbose mode
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2019-07-09 13:36:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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b15d59cf03
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(v0.7.1.9009) note for WHOCC
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2019-07-09 11:22:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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c57ad26c5b
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(v0.7.1.9007) mdro update
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2019-07-04 15:26:07 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ff20af123
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(v0.7.1.9006) new rsi calculations, atc class removal
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2019-07-02 16:48:52 +02:00 |
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dr. M.S. (Matthijs) Berends
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156d550895
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(v0.7.1.9005) new rsi calculations, atc class removal
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2019-07-01 14:03:15 +02:00 |
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dr. M.S. (Matthijs) Berends
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65c6702b21
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(v0.7.1.9004) atc class removal
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2019-06-27 11:57:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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453c159eac
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0.7.1
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2019-06-23 14:49:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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c9156c004a
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(v0.7.0.9013) mo_synonym fix
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2019-06-22 14:49:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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7094c1f459
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website update
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2019-06-16 22:14:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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9c39c35f86
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(v0.7.0.9010) mo_synonyms, plot/barplot fixes
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2019-06-16 21:42:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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980be2b22d
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(v0.7.0.9009) global note
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2019-06-13 16:40:35 +02:00 |
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dr. M.S. (Matthijs) Berends
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254745061c
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(v0.7.0.9008) T. vaginalis, rsi_df
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2019-06-13 14:28:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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699e87ab4a
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(v0.7.0.9007) renamed notes fix
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2019-06-12 16:08:20 +02:00 |
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dr. M.S. (Matthijs) Berends
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44ab53128e
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(v0.7.0.9006) ab algorithm fix for ATC codes
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2019-06-11 15:31:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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8f674e19bb
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(v0.7.0.9005) ab algorithm update
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2019-06-11 14:18:25 +02:00 |