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768fe17324
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removed clipboard functions as it violated CRAN policies
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2018-09-28 16:05:18 +02:00 |
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2b0080995e
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speed improvement for as.mo, more old taxonomic names
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2018-09-27 23:23:48 +02:00 |
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450992baea
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new: 1680 old taxonomic names
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2018-09-25 16:44:40 +02:00 |
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da60f27877
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travis cant find knitr vignette builder
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2018-09-25 00:36:35 +02:00 |
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9c566585b0
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first inclusion of ITIS data
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2018-09-24 23:33:29 +02:00 |
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df5d82fff3
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unit tests
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2018-09-17 21:51:21 +02:00 |
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5d80cef338
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added taxonomic data from ITIS
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2018-09-17 20:53:32 +02:00 |
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7680e4edd8
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add shortest and longest to freq for characters
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2018-09-17 09:42:09 +02:00 |
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db14781593
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add labels_rsi_count
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2018-09-16 22:11:17 +02:00 |
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b792a2754e
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added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
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2018-09-16 16:43:29 +02:00 |
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b0ca49d68d
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small improvement for is.rsi.eligible, more unit tests
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2018-09-14 11:54:01 +02:00 |
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cb0d74a4f0
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support for French and Italian, added quote to freq
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2018-09-10 15:45:25 +02:00 |
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b83e6a9380
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algoritm improvement, removed all Catabacter except for C. hongkongensis
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2018-09-10 11:40:54 +02:00 |
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4816419f0c
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AI improvements for microorganisms
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2018-09-09 12:11:44 +02:00 |
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936198372e
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translate CoNS
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2018-09-08 16:24:12 +02:00 |
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26f5be0033
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support for portuguese, language determination based on system
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2018-09-08 16:06:47 +02:00 |
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de36b0be23
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fix for empty values in mo_property
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2018-09-05 12:21:27 +02:00 |
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e39a9a8b05
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added mo_shortname
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2018-09-05 10:51:46 +02:00 |
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b388e3fee7
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Support for German and Spanish microorganism properties, cleanup
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2018-09-04 11:33:30 +02:00 |
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75fe4d401f
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new MOs, cleanup
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2018-09-01 21:19:46 +02:00 |
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5965d3c794
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replaced bactid by mo
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2018-08-31 13:36:19 +02:00 |
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d9e68e0a50
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ggplot_rsi example update, more unit tests
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2018-08-29 16:25:57 +02:00 |
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029157b3be
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163 new trade names, added ab_tradenames
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2018-08-29 12:27:37 +02:00 |
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972fc4f6c7
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ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid
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2018-08-28 13:51:13 +02:00 |
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2acdb1981c
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atc and bactid functions, readme update
|
2018-08-25 22:01:14 +02:00 |
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460dee789f
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typo
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2018-08-24 14:33:35 +02:00 |
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baaf4cc3e1
|
few extra tests
|
2018-08-24 14:18:38 +02:00 |
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a100d07da6
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removed ratio, better rsi_calc, update for freq
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2018-08-24 11:08:20 +02:00 |
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febd0ca885
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geom_rsi - any parameter
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2018-08-23 21:27:15 +02:00 |
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8ab93b6688
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unit tests
|
2018-08-23 01:01:50 +02:00 |
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da5379c881
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quasiquotation, alpha for geom_rsi
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2018-08-23 00:40:36 +02:00 |
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3e87c8f409
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count_* functions
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2018-08-22 00:02:26 +02:00 |
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b0995362af
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testthat error
|
2018-08-14 12:00:01 +02:00 |
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533342583a
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Travis checks
|
2018-08-14 11:37:40 +02:00 |
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7584c929a5
|
new AppVeyor environment
|
2018-08-14 08:57:17 +02:00 |
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59ce1eb1b1
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ggplot_rsi improvements
|
2018-08-13 16:42:37 +02:00 |
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dba06c3295
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abname improvement, small fixes
|
2018-08-13 11:00:53 +02:00 |
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ce2cdb9309
|
support groups for portion_df, update README
|
2018-08-12 22:34:03 +02:00 |
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e5d32cafe0
|
new unit tests for ggplot, small fixes
|
2018-08-12 17:44:06 +02:00 |
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53fa198e35
|
new portion functions
|
2018-08-10 15:01:05 +02:00 |
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ae2433a020
|
rsi family for resistance analysis
|
2018-08-03 14:49:29 +02:00 |
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6262315527
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Becker classification
Lancefield classification
Added Lancefield groups to `microorganisms` data set
|
2018-08-02 13:15:45 +02:00 |
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edd2dd09dc
|
rsi for freq
|
2018-08-01 22:37:28 +02:00 |
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d8f70a74de
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clipboard error
|
2018-08-01 10:32:24 +02:00 |
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510e8f22aa
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more unit tests
|
2018-07-30 00:57:49 +02:00 |
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d0a115d995
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bactid speed improvement
|
2018-07-30 00:14:06 +02:00 |
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826694323b
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new functions R, RI, SI, S
|
2018-07-29 22:14:51 +02:00 |
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feab1cad6b
|
small fixes
|
2018-07-28 09:34:03 +02:00 |
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498e88b5cf
|
improvement for forecasting resistance
|
2018-07-26 16:30:42 +02:00 |
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d9e204031d
|
update to septic_patients, speed improvements
|
2018-07-25 14:17:04 +02:00 |
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8421638b60
|
new class bactid
|
2018-07-23 14:14:03 +02:00 |
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9920ac8a5c
|
fix for keyab, more examples
|
2018-07-23 10:35:39 +02:00 |
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0d64c166f0
|
keyab fixes
|
2018-07-17 19:51:09 +02:00 |
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5cb9c541f8
|
new algorithm key abs
|
2018-07-17 13:02:05 +02:00 |
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967ee86757
|
add unit tests
|
2018-07-17 11:18:36 +02:00 |
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a5a4354651
|
speed improvements
|
2018-07-17 10:32:26 +02:00 |
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6eaf33baf3
|
speed improvements
|
2018-07-15 22:56:41 +02:00 |
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b6655f6454
|
Welcome C++!
|
2018-07-13 17:23:46 +02:00 |
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a28289562a
|
remove print function, out of scope
|
2018-07-11 20:12:19 +02:00 |
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e3e10c2e88
|
fix for macOS and older tidyr versions
|
2018-07-11 12:34:02 +02:00 |
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eca406b18b
|
travis build fails for macos
|
2018-07-11 11:46:06 +02:00 |
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f63414d519
|
new g.test, extra unit tests
|
2018-07-10 12:27:07 +02:00 |
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fc30d3fb13
|
freq: support for table
|
2018-07-09 14:02:58 +02:00 |
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|
14b990d769
|
kurtosis, skewness, start with ML
|
2018-07-08 22:14:55 +02:00 |
|
|
|
34ee0247ac
|
addins and small improvements to microorganisms dataset
|
2018-07-04 17:20:03 +02:00 |
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|
3d0d21f322
|
rename vector2ratio to ratio
|
2018-07-02 11:14:20 +02:00 |
|
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|
a1acb2f3ac
|
extra unit tests
|
2018-07-02 09:34:20 +02:00 |
|
|
|
3527894b49
|
new g.test() and edited freq()
|
2018-07-01 21:40:37 +02:00 |
|
|
|
6ee713cec1
|
move tbl_parse_guess
|
2018-06-29 08:56:03 +02:00 |
|
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|
649a8025aa
|
add clipboard functions again
|
2018-06-27 15:54:56 +02:00 |
|
|
|
a9bd5472d0
|
top_freq
|
2018-06-20 14:47:37 +02:00 |
|
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|
4a027f3c34
|
extra unit tests, add row.names to freq
|
2018-06-19 15:20:14 +02:00 |
|
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|
bdc860e29c
|
atc_groups
|
2018-06-19 10:05:38 +02:00 |
|
|
|
0a5898b17d
|
fix for printing tibbles, improve guess_bactid
|
2018-06-08 12:06:54 +02:00 |
|
uscloud
|
dcc26dd942
|
Update freq function
|
2018-05-22 16:34:22 +02:00 |
|
|
|
f05e7178cb
|
added vignette of freq
|
2018-05-09 11:44:46 +02:00 |
|
|
|
c0fc82c794
|
Added function n_rsi
|
2018-05-02 14:56:25 +02:00 |
|
|
|
19ccc51f40
|
remove clipboard functions
|
2018-05-01 09:36:45 +02:00 |
|
|
|
6fa93fc286
|
fix clipboard check
|
2018-04-30 16:54:37 +02:00 |
|
|
|
8fe70d5652
|
Fix Latex PDF error
|
2018-04-30 16:24:11 +02:00 |
|
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|
970e3ed7f1
|
EUCAST rules for MDRO
|
2018-04-25 15:33:58 +02:00 |
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|
0b22ddef8e
|
more unit tests
|
2018-04-20 13:45:34 +02:00 |
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|
82fec5cc51
|
Try to support older R versions
|
2018-04-19 14:10:57 +02:00 |
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|
e7396b8f39
|
Try to support older R versions
|
2018-04-19 12:50:23 +02:00 |
|
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|
4b5530ed64
|
Try to support older R versions
|
2018-04-18 15:19:00 +02:00 |
|
|
|
2509e2413d
|
MDRO, freq tables, new print format for tibbles
|
2018-04-18 12:24:54 +02:00 |
|
|
|
3165c50d06
|
more MOs
|
2018-04-03 16:07:32 +02:00 |
|
|
|
4a47e59e6f
|
fortify code with more tests
|
2018-04-03 11:08:31 +02:00 |
|
|
|
972e923484
|
testthat for macOS
|
2018-04-02 16:21:03 +02:00 |
|
|
|
07bdd61241
|
update dependencies
|
2018-04-02 16:05:09 +02:00 |
|
|
|
c182a9673d
|
fix clipboard on linux
|
2018-04-02 11:11:21 +02:00 |
|
MS Berends
|
e2a5202b69
|
Update test-clipboard.R
|
2018-03-29 14:47:52 +02:00 |
|
MS Berends
|
258e080756
|
Update test-clipboard.R
|
2018-03-29 14:26:26 +02:00 |
|
MS Berends
|
339b445a30
|
Update test-clipboard.R
|
2018-03-29 13:12:49 +02:00 |
|
|
|
1b3cc41c08
|
fix tests
|
2018-03-27 17:58:46 +02:00 |
|
|
|
6f7730dcaa
|
add tests using testthat
|
2018-03-27 17:43:42 +02:00 |
|
