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Commit Graph

39 Commits

Author SHA1 Message Date
681fe011fe (v2.1.1.9082) algorithm updates 2024-09-30 18:46:55 +02:00
4e96a56b6a (v2.1.1.9073) unit tests 2024-09-19 13:57:36 +02:00
573c0346ed (v2.1.1.9070) fix for mo_current mo (no-verify) 2024-07-19 18:05:49 +02:00
7258a491b9 (v2.1.1.9068) fix for mo_url() and as.mo() for synonyms 2024-07-17 14:29:55 +02:00
7f344836ea (v2.1.1.9064) unit tests 2024-07-16 15:55:58 +02:00
640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
2899b3c840 new mo_group_members() 2024-04-19 10:18:21 +02:00
dab20c09f6 unit test 2023-07-10 18:30:26 +02:00
70c601ca11 breakpoints UTI interpretation fix 2023-07-10 13:41:52 +02:00
acb534102b new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
Dr. Matthijs Berends
f065945d7b
Update clinical breakpoints and fix some as.mo() bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
2023-06-22 15:10:59 +02:00
9591688811 documentation update 2023-05-27 10:39:22 +02:00
8179092c57 add XPT files for SAS software 2023-05-12 10:07:55 +02:00
91fa73dedf add oxygen tolerance 2023-05-11 21:56:27 +02:00
8d902410f9 unit tests 2023-02-18 14:56:06 +01:00
a4cd38c433 fix for R < 3.2, expect_warning() on hold 2023-02-14 10:41:01 +01:00
03294c7901 fix for Salmonella group A, unit tests 2023-02-10 16:47:25 +01:00
24b12024ce unit test fix 2023-01-20 09:45:03 +01:00
b94bc6c67b adding mo fixes 2023-01-14 19:50:25 +01:00
cf16bc7de1 unit tests 2023-01-06 13:45:20 +01:00
86e28bafce add mo_pathogenicity 2023-01-06 13:35:37 +01:00
f619fb683b support new mo codes 2022-12-27 15:16:15 +01:00
23fe427cbc Fixes for Salmonella 2022-12-17 14:31:33 +01:00
510140fc55 Updated mo_gramstain() to reflect current taxonomy, fixes #83 2022-12-09 10:30:25 +01:00
3d9faf89cf ATC and DDD update 2022-10-29 19:01:23 +02:00
85e2fbe4a3 remove warnings from unit tests 2022-10-19 11:47:57 +02:00
43c638d122 add mo_current() 2022-10-10 10:12:08 +02:00
Dr. Matthijs Berends
cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
e18c49ed93 (v1.7.1.9063) not_intrinsic_resistant 2021-12-09 10:48:25 +01:00
2bcf28281d (v1.7.1.9049) unit tests 2021-10-05 09:58:08 +02:00
e4de7f5055 (v1.7.1.9028) fix unit test 2021-08-20 00:08:31 +02:00
b228eb1536 (v1.7.1.9016) only_treatable ab selectors 2021-07-08 22:23:28 +02:00
350dbe6a11 (v1.7.1.9012) update unit tests 2021-07-04 20:25:30 +02:00
279376fccb (v1.7.0.9002) old MO codes 2021-06-01 16:36:33 +02:00
b210f1327c (v1.6.0.9055) support codecov again 2021-05-21 20:20:51 +02:00
916df6e90c (v1.6.0.9041) filter_ab_class() fix 2021-05-16 10:50:00 +02:00
d8c91d5876 (v1.6.0.9031) tinytest unit tests 2021-05-15 21:36:22 +02:00