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Commit Graph

76 Commits

Author SHA1 Message Date
09c4b04cd0 (v0.8.0.9007) Enterobacterales order 2019-10-30 23:02:50 +01:00
00cdb498a0 (v0.7.1.9102) lintr 2019-10-11 17:21:02 +02:00
66d405ff57 (v0.7.1.9080) new LIS codes 2019-09-22 17:19:59 +02:00
40e6b3e8f6 (v0.7.1.9077) mo codes fix 2019-09-20 14:18:29 +02:00
3596adb295 (v0.7.1.9076) mo codes 2019-09-20 12:33:05 +02:00
e2aa4f996b (v0.7.1.9075) new microorganism codes 2019-09-18 15:46:09 +02:00
93be16484b (v0.7.1.9063) septic_patients -> example_isolates 2019-08-27 16:45:42 +02:00
7108454ba5 (v0.7.1.9055) algorithm improvements 2019-08-13 16:15:08 +02:00
3f5828e74a (v0.7.1.9034) mo.codes fix for Dracunculus spp. 2019-08-09 23:45:26 +02:00
6598c5615d (v0.7.1.9033) 5000 new fungi 2019-08-09 23:22:10 +02:00
3a1f960f89 (v0.7.1.9024) eucast_rules() fix, new MOs 2019-08-06 14:39:22 +02:00
65c6702b21 (v0.7.1.9004) atc class removal 2019-06-27 11:57:45 +02:00
254745061c (v0.7.0.9008) T. vaginalis, rsi_df 2019-06-13 14:28:46 +02:00
8f674e19bb (v0.7.0.9005) ab algorithm update 2019-06-11 14:18:25 +02:00
270aa0dd33 v0.7.0 2019-06-03 17:45:22 +02:00
bd73988f15 (v0.6.1.9053) prerelease fixes 2019-06-02 19:23:19 +02:00
60983a1640 added mdr_tb() 2019-05-23 16:58:59 +02:00
cc403169c6 first isolate missing dates fix 2019-05-13 14:56:23 +02:00
68cc7ef0d0 new antibiotics 2019-05-10 16:44:59 +02:00
fbc9191b13 new EUCAST rules algorithm 2019-04-05 18:47:39 +02:00
c6a12266e7 DSMZ data 2019-03-18 14:29:41 +01:00
504a042fba uncertainty levels, new WHONET codes 2019-03-12 12:19:27 +01:00
e835525cf6 unknown codes, rsi fix 2019-03-02 22:47:04 +01:00
f9ded23023 as.mo improvement 2019-02-26 12:33:26 +01:00
41ad7a22c8 mo_rank mo_url, added Tremellales 2019-02-22 22:12:10 +01:00
68a9a35ed6 algorithm update 2019-02-21 18:55:52 +01:00
fb1fc3686c Catalogue of life 2019-02-20 00:04:48 +01:00
54f8258f8c Catalogue of Life, replaces ITIS 2019-02-18 02:33:37 +01:00
ed30312048 mo codes for WHONET 2019-02-08 16:06:54 +01:00
587e00b7be is.rsi.eligible update 2019-02-04 12:24:07 +01:00
3efb54d016 freq update 2019-01-29 20:20:09 +01:00
6aae206320 WHONET/EARS-Net support 2019-01-29 00:06:50 +01:00
f4ff98b470 WHO update, antibiotics update 2019-01-25 13:18:41 +01:00
46dcc7e2e8 set_mo_source 2019-01-21 15:53:01 +01:00
193a2d2863 EUCAST update, as.mo bugfix for empty vlaues 2019-01-08 16:23:45 +01:00
6b2d464f8c big website update, licence txt update 2019-01-02 23:24:07 +01:00
b937662a97 limits for scale_y_percent - Licence update 2018-12-16 22:45:12 +01:00
7e5fe75a17 small text fixes 2018-12-14 07:48:12 +01:00
6b0f4ffbd4 new kingdom 2018-11-09 13:11:54 +01:00
9cd4ab928a speed improvement as.mo, freq title 2018-10-31 12:10:49 +01:00
86b03577a7 fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00
693f64bdbf new EUCAST rules: clinical breakpoints 2018-10-17 17:32:34 +02:00
ed17db0263 renamed year columns to ref 2018-10-01 14:44:40 +02:00
3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
a6aa9e95fb completed old taxonomic names 2018-09-28 20:13:13 +02:00
2b0080995e speed improvement for as.mo, more old taxonomic names 2018-09-27 23:23:48 +02:00
450992baea new: 1680 old taxonomic names 2018-09-25 16:44:40 +02:00
9c566585b0 first inclusion of ITIS data 2018-09-24 23:33:29 +02:00
5d80cef338 added taxonomic data from ITIS 2018-09-17 20:53:32 +02:00
b792a2754e added prevalence column and alterted as.mo algorith to use it, added ab_name as alias 2018-09-16 16:43:29 +02:00