 dr. M.S. (Matthijs) Berends
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a4e2e25e3f
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reftbl in plots, speedup for as.sir() and mo_validate
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2023-07-10 16:43:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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70c601ca11
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breakpoints UTI interpretation fix
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2023-07-10 13:41:52 +02:00 |
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dr. M.S. (Matthijs) Berends
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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2d97cca6d9
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fix `reference_df` endless loop
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2023-06-26 13:52:02 +02:00 |
Dr. Matthijs Berends
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f065945d7b
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Update clinical breakpoints and fix some `as.mo()` bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
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2023-06-22 15:10:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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02322ac2ee
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Fix PK/PD breakpoints
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2023-04-19 00:31:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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ed70f95380
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Fix clinical breakpoints
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2023-04-14 23:14:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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dad25302f2
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make `rsi` work in more cases, documentation update
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2023-02-22 14:38:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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68abb00c59
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add include_screening to `as.sir()`
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2023-02-12 15:09:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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bc434db835
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bring back `antibiogram()`, without deps
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2023-02-10 16:18:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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70a7ba0206
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fix first isolate
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2023-02-10 13:13:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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1a0dc4bf46
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revert back to pre-antibiogram
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2023-02-09 13:07:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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9e99e66f01
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use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi
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2023-02-06 11:57:22 +01:00 |
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dr. M.S. (Matthijs) Berends
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830c67f1bf
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documentation, unit tests
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2023-01-24 10:20:27 +01:00 |
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dr. M.S. (Matthijs) Berends
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eef00069fd
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add all options to documentation
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2023-01-23 20:07:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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19fd0ef121
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sort sir history
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2023-01-23 15:01:21 +01:00 |
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Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |