14 Commits

Author	SHA1	Message	Date
dr. M.S. (Matthijs) Berends	640888f408	(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update	2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends	7cda9e575b	prepare for CRAN	2023-10-20 14:51:48 +02:00
dr. M.S. (Matthijs) Berends	acb534102b	new species groups, updated clinical breakpoints	2023-07-08 17:30:05 +02:00
dr. M.S. (Matthijs) Berends	9591688811	documentation update	2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends	7ad8635994	documentation for 'data.table' AB selectors	2023-03-11 16:54:02 +01:00
dr. M.S. (Matthijs) Berends	45e840c02f	update NEWS	2023-03-11 14:43:31 +01:00
dr. M.S. (Matthijs) Berends	1d3d7d40bc	get episode unit tests	2023-02-24 19:54:56 +01:00
dr. M.S. (Matthijs) Berends	2c5a9bb622	new relative episode determination in `get_episode()`, fix for plotting disk/MIC values	2023-02-24 17:06:30 +01:00
dr. M.S. (Matthijs) Berends	45a9697c84	unit tests	2023-02-12 17:10:48 +01:00
dr. M.S. (Matthijs) Berends	68abb00c59	add include_screening to `as.sir()`	2023-02-12 15:09:54 +01:00
dr. M.S. (Matthijs) Berends	bc434db835	bring back `antibiogram()`, without deps	2023-02-10 16:18:00 +01:00
dr. M.S. (Matthijs) Berends	70a7ba0206	fix first isolate	2023-02-10 13:13:17 +01:00
dr. M.S. (Matthijs) Berends	1a0dc4bf46	revert back to pre-antibiogram	2023-02-09 13:07:39 +01:00
dr. M.S. (Matthijs) Berends	9e99e66f01	use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi	2023-02-06 11:57:22 +01:00