Matthijs Berends
03be4b87fc
(v3.0.1.9079) docs: rename remaining 'antibiotic selectors'/'AB selectors' to 'antimicrobial selectors'/'AMR selectors'
...
* docs: rename remaining 'antibiotic selectors'/'AB selectors' to 'antimicrobial selectors'/'AMR selectors'
Five leftover occurrences of the old terminology updated in the AMR
vignette (section heading + code comment), the amr_selectors test file,
and two roxygen example comments in amr_selectors.R. The auto-generated
man/antimicrobial_selectors.Rd will update on the next devtools::document() run.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
Claude-Session: https://claude.ai/code/session_0169LucQ7SHDLHdTnDs1ENhd
* fix
---------
Co-authored-by: Claude <noreply@anthropic.com >
2026-06-27 14:31:58 +02:00
9898b5df4b
(v3.0.1.9059) Fix WISCA in vignette
2026-06-23 14:38:59 +02:00
Matthijs Berends
8ff5d4472a
Add add_if_missing parameter to control NA handling in interpretive rules ( #264 )
2026-04-21 21:53:43 +02:00
cfbbfb4fa5
(v3.0.1.9007) fix #246
2026-01-06 23:08:50 +01:00
2461631bce
(v2.1.1.9268) WISCA vignette, antibiogram sorting, fix translations
2025-05-01 14:45:21 +02:00
aa8f6af185
(v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro
2025-02-23 11:18:08 +01:00
9de19fdc49
documentation
2023-04-21 10:07:25 +02:00
262598b8d7
support for old rsi arguments
2023-03-11 14:24:34 +01:00
4416394e10
website update
2023-02-26 21:26:58 +01:00
ba255ddb00
website
2023-02-18 11:57:17 +01:00
bc434db835
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
19fd0ef121
sort sir history
2023-01-23 15:01:21 +01:00
Dr. Matthijs Berends
98e62c9af2
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
e7af5fc716
fix AMR vignette
2022-08-28 22:38:08 +02:00
4d050aef7c
styled, unit test fix
2022-08-28 10:31:50 +02:00
303d61b473
new tibble export
2022-08-27 20:49:37 +02:00
d6676e9443
disk documentation fix
2022-08-21 16:52:09 +02:00
08d387b5ce
(v1.8.0.9005) as.rsi() fix
2022-03-10 19:33:25 +01:00
e63defe324
(v1.7.1.9062) website update
2021-12-06 11:12:30 +01:00
d1b16ce641
(v1.7.1.9048) unit tests
2021-10-04 10:22:10 +02:00
4e1efd902c
(v1.7.1.9022) rely on vctrs for ab selectors
2021-07-23 21:42:11 +02:00
16b4c74d44
(v1.7.1.9013) temp fix for ggplot2 bug #4511
2021-07-04 22:10:46 +02:00
ac73a8d849
v1.7.0
2021-05-24 15:29:17 +02:00
41f94cde97
(v1.5.0.9027) website update
2021-02-26 12:11:29 +01:00
1737d56ae4
(v1.5.0.9026) vignette update, support for GISA
2021-02-25 12:31:12 +01:00
2eca8c3f01
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
2021-02-02 23:57:35 +01:00
28e77680c5
(v1.4.0) matching score update
2020-10-08 11:16:03 +02:00
ac12392da3
(v1.2.0.9008) ab_class improvement
2020-06-17 15:14:37 +02:00
ae1969b941
(v1.1.0.9019) mo_source fix
2020-05-25 01:01:14 +02:00
5216d2b520
(v1.1.0.9014) lose dependencies
2020-05-19 14:16:45 +02:00
bf0402a653
(v1.1.0.9009) lose dependencies
2020-05-18 10:30:53 +02:00
df2456b91f
(v1.1.0.9005) lose dependencies
2020-05-16 20:08:21 +02:00
7f3da74b17
(v1.1.0.9004) lose dependencies
2020-05-16 13:05:47 +02:00
5e2b294351
(v0.9.0.9026) update documentation
2020-02-17 14:38:01 +01:00
ba3ce77f02
(v0.9.0.9005) as.mo for G. species
2019-12-21 10:56:06 +01:00
cc8cd043e1
(v0.9.0.9004) website fix
2019-12-20 21:06:39 +01:00
bb2ed55842
(v0.9.0) v0.9.0
2019-11-29 19:43:23 +01:00
267320f15f
(v0.8.0.9033) antivirals data set, cleanup
2019-11-18 12:10:47 +01:00
248b45da71
(v0.8.0.9030) depend on tidyr >= 1.0.0
2019-11-11 10:46:39 +01:00
59ededa8dc
(v0.8.0.9027) adding susceptibility() and resistance()
2019-11-10 12:16:56 +01:00
ef640add2d
(v0.8.0.9021) update vignettes
2019-11-09 11:33:22 +01:00
1736fb62d6
(v0.7.1.9105) another try
2019-10-12 10:08:55 +02:00
2eb4a42f3d
(v0.7.1.9104) vignette fix
2019-10-12 09:15:27 +02:00
edb599ae0b
(v0.7.1.9091) percentage from clean pkg
2019-09-30 16:45:36 +02:00
3596adb295
(v0.7.1.9076) mo codes
2019-09-20 12:33:05 +02:00
93be16484b
(v0.7.1.9063) septic_patients -> example_isolates
2019-08-27 16:45:42 +02:00
240f03a672
(v0.7.1.9015) Remove freq()
2019-07-29 13:33:48 +02:00
9c39c35f86
(v0.7.0.9010) mo_synonyms, plot/barplot fixes
2019-06-16 21:42:40 +02:00
bd73988f15
(v0.6.1.9053) prerelease fixes
2019-06-02 19:23:19 +02:00
4ca00e1868
speed improvement eucast_rules(), support more old MO codes
2019-05-20 12:00:18 +02:00
