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mirror of https://github.com/msberends/AMR.git synced 2025-04-22 21:43:52 +02:00

192 Commits

Author SHA1 Message Date
f310318c5f
repo fix 2025-04-19 15:59:52 +02:00
492fe6872f
(v2.1.1.9244) automated GPT training data 2025-04-19 15:57:12 +02:00
40d7a971c3
(v2.1.1.9236) documentation 2025-04-12 11:46:42 +02:00
36fd99e1f4
(v2.1.1.9235) New website! 2025-04-08 15:54:30 +01:00
8d8444c607
(v2.1.1.9216) PyPI access token 2025-03-17 08:56:27 +01:00
1f35ff2b0b
(v2.1.1.9215) python token 2025-03-16 18:50:37 +01:00
a092eb3ce3
(v2.1.1.9214) aaaaaand another attempt 2025-03-16 14:03:40 +01:00
c614d66495
(v2.1.1.9213) snapshots 2025-03-16 13:41:08 +01:00
7a39439fa9
(v2.1.1.9212) unit tests 2025-03-16 13:25:54 +01:00
98bc83da73
(v2.1.1.9211) fix python wrapper 2025-03-16 13:11:26 +01:00
ceb3e6675d
(v2.1.1.9210) unit tsts 2025-03-15 20:58:05 +01:00
5c11b924de
(v2.1.1.9209) unit tests 2025-03-15 20:46:33 +01:00
6bdc798734
(v2.1.1.9208) unit tests 2025-03-15 20:30:29 +01:00
ede1cdfd99
(v2.1.1.9205) Fix python wrapper 2025-03-15 16:14:29 +01:00
afb97ad38f
(v2.1.1.9204) move python package to separate branch 2025-03-15 16:02:57 +01:00
72f2e723fb
(v2.1.1.9200) new argument capped_mic_handling, add Search to website 2025-03-14 17:01:50 +01:00
a2c2be23c1
(v2.1.1.9190) antibiotics deprecation in antibiogram() 2025-03-09 10:41:11 +01:00
fa519105eb
lintr fix 2025-02-27 16:44:56 +01:00
07efc292bc
(v2.1.1.9163) cleanup 2025-02-27 14:04:29 +01:00
22e66741cc
(v2.1.1.9160) cleanup 2025-02-26 20:28:33 +01:00
0c3ea4b538
(v2.1.1.9159) new approach as.ab() 2025-02-26 19:23:54 +01:00
cc2bb151ab
(v2.1.1.9142) unit test fix 2025-02-07 19:03:02 +01:00
8ba2e4ed94
(v2.1.1.9141) new AMR selectors, eucast overwrite arg 2025-02-07 18:01:22 +01:00
2561494e06
(v2.1.1.9133) update math formulae 2025-01-27 22:43:35 +01:00
9520977a10
(v2.1.1.9133) (v2.1.1.9132) unit test, final fixes 2025-01-27 22:09:16 +01:00
f03933940c
(v2.1.1.9131) implement testthat 2025-01-27 21:43:10 +01:00
d7de1bc33d
(v2.1.1.9118) move ggplot2 plotting functions to general 'plotting' man page 2024-12-14 19:41:15 +01:00
bfef094bbc
(v2.1.1.9117) fix unit tests for old R versions 2024-12-13 10:35:17 +01:00
31a0da0d3a (v2.1.1.9106) bump version nr for Python testing 2024-11-21 11:22:37 +01:00
a80bb5146e add Python package to repo 2024-11-21 11:07:55 +01:00
da6321c504 (v2.1.1.9102) fix sir 2024-10-18 10:58:57 +02:00
11b1dc2b02 Fix Py 2024-10-17 15:28:13 +02:00
b1399259e7 (v2.1.1.9100) PyPI update 2024-10-17 15:22:19 +02:00
40edc16fdf fix PyPI 2024-10-15 17:31:47 +02:00
5c4d8fcd2a (v2.1.1.9095) Python support 2024-10-15 17:12:55 +02:00
94501371cd (v2.1.1.9094) fix antibiotics 2024-10-10 16:38:20 +02:00
640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
fc269e667d unit test fix 2024-05-20 18:58:35 +02:00
0d8a91db49 rename pre-commit hook to pre-commit checks (no-check) 2024-04-23 10:55:48 +02:00
7cd9ca274c add strep groups to ABCG 2023-07-12 11:41:25 +01:00
acb534102b new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
9591688811 documentation update 2023-05-27 10:39:22 +02:00
e1966503ee unit testing R4.3 2023-05-26 20:37:00 +02:00
0bcf55d3b6 improve as.mo() 2023-05-24 15:55:53 +02:00
Dr. Matthijs Berends
af139a3c82
unit test fix for old R versions 2023-01-21 23:53:31 +01:00
Dr. Matthijs Berends
98e62c9af2
Replace RSI with SIR 2023-01-21 23:47:20 +01:00
86e28bafce add mo_pathogenicity 2023-01-06 13:35:37 +01:00
4801a6067e unit tests 2023-01-06 11:22:02 +01:00
8a0a0d4682 unit tests 2023-01-06 10:08:25 +01:00
268ec31d92 unit tests 2023-01-05 18:21:48 +01:00