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python-wrapper

sir-s3-update

#109

#117

#134

#181

#192

#205

#212

#221

#226

#226

#65

#67

#68

#71

#72

#77

#93

#97

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v0.1.1

v0.2.0

v0.3.0

v0.4.0

v0.5.0

v0.6.0

v0.6.1

v0.7.0

v0.7.1

v0.8.0

v0.9.0

v1.0.0

v1.0.1

v1.1.0

v1.2.0

v1.3.0

v1.4.0

v1.5.0

v1.6.0

v1.7.0

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v1.8.0

v1.8.1

v1.8.2

v2.0.0

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v2.1.1

v3.0.0

32361053f1 Built site for AMR@3.0.0.9033: 5796e8f gh-pages github-actions 2025-09-15 07:19:27 +00:00
54717451ac Python wrapper update python-wrapper github-actions[bot] 2025-09-15 07:11:37 +00:00
5796e8f3a4 (v3.0.0.9033) rename workflow main dr. M.S. (Matthijs) Berends 2025-09-15 09:10:54 +02:00
660bcf00e5 Built site for AMR@3.0.0.9032: b11866a github-actions 2025-09-13 12:12:30 +00:00
b11866af57 (v3.0.0.9032) add GitHub Action for dev version of packages dr. M.S. (Matthijs) Berends 2025-09-13 14:02:59 +02:00
cf182a28f1 Built site for AMR@3.0.0.9031: e8c99f2 github-actions 2025-09-12 15:01:39 +00:00
e8c99f2775 (v3.0.0.9031) fix for ggplot2 dr. M.S. (Matthijs) Berends 2025-09-12 16:52:59 +02:00
ccfe6caf58 Built site for AMR@3.0.0.9030: 5b99888 github-actions 2025-09-11 12:48:56 +00:00
5b99888151 (v3.0.0.9030) fix NEWS dr. M.S. (Matthijs) Berends 2025-09-11 14:41:28 +02:00
be9c71b572 Built site for AMR@3.0.0.9029: c7b2acb github-actions 2025-09-10 14:30:52 +00:00
c7b2acbeb6 (v3.0.0.9029) fix for vignette and envir data dr. M.S. (Matthijs) Berends 2025-09-10 16:19:30 +02:00
1922fb5ff2 (v3.0.0.9028) fix as.ab() warning dr. M.S. (Matthijs) Berends 2025-09-10 15:06:51 +02:00
4d7c4ca52c (v3.0.0.9027) skimr update and as.ab warning - fixes #234, fixes #232 dr. M.S. (Matthijs) Berends 2025-09-10 13:32:52 +02:00
d5a568318b (v3.0.0.9026) fix tidymodels doc dr. M.S. (Matthijs) Berends 2025-09-04 15:03:28 +02:00
c1c49fa463 (v3.0.0.9025) fix todo tracker dr. M.S. (Matthijs) Berends 2025-09-04 14:40:24 +02:00
d2ced1db61 (v3.0.0.9024) fix todo tracker dr. M.S. (Matthijs) Berends 2025-09-04 14:28:01 +02:00
3d40b20c10 (v3.0.0.9023) update todo tracker dr. M.S. (Matthijs) Berends 2025-09-04 14:04:22 +02:00
3ba1b8a10a (v3.0.0.9022) postpone new features - we like a clearly focussed bugfix release first dr. M.S. (Matthijs) Berends 2025-09-03 15:39:44 +02:00
d1f9877a8e Built site for AMR@3.0.0.9021: 0744c6f github-actions 2025-09-03 10:21:26 +00:00
0744c6feee (v3.0.0.9021) checkouts dr. M.S. (Matthijs) Berends 2025-09-03 12:12:05 +02:00
75b8c2485a Built site for AMR@3.0.0.9019: eca6385 github-actions 2025-09-03 09:56:20 +00:00
eca638529c new umcg logo and old CHECKOUT update dr. M.S. (Matthijs) Berends 2025-09-03 11:49:10 +02:00
43285cb936 Built site for AMR@3.0.0.9019: 60bd631 github-actions 2025-09-01 15:07:43 +00:00
60bd631e1a (v3.0.0.9019) Fixes #229, #230, #227, #225 dr. M.S. (Matthijs) Berends 2025-09-01 16:56:55 +02:00
4542802e26 Built site for AMR@3.0.0.9018: 9b07a85 github-actions 2025-08-07 14:35:23 +00:00
9b07a8573a (v3.0.0.9018) keep all reasons in mdro(), fixed #227 dr. M.S. (Matthijs) Berends 2025-08-07 16:23:47 +02:00
d232666e49 update sir to include interpretation details sir-s3-update dr. M.S. (Matthijs) Berends 2025-08-01 15:15:49 +02:00
e8a82b62b7 Built site for AMR@3.0.0.9017: fc72cf9 github-actions 2025-07-28 10:32:15 +00:00
fc72cf9324 (v3.0.0.9017) semantic versioning only on branch main dr. M.S. (Matthijs) Berends 2025-07-28 12:24:52 +02:00
501395d46e Built site for AMR@3.0.0.9016: 2f86698 github-actions 2025-07-23 20:25:40 +00:00
2f866985c9 (v3.0.0.9016) fix for plotting dr. M.S. (Matthijs) Berends 2025-07-23 22:05:20 +02:00
a09b81fb58 Built site for AMR@3.0.0.9015: 6cb724a github-actions 2025-07-19 12:16:34 +00:00
6cb724a208 (v3.0.0.9015) plotting fix github-actions[bot] 2025-07-19 14:06:36 +02:00
3be689a8db Built site for AMR@3.0.0.9014: 49274f0 github-actions 2025-07-18 14:05:50 +00:00
49274f010b (v3.0.0.9014) fix plot colours dr. M.S. (Matthijs) Berends 2025-07-18 15:57:48 +02:00
7f9aacb56b Built site for AMR@3.0.0.9012: 8da0f52 github-actions 2025-07-17 21:05:56 +00:00
8da0f525b5 set lang for R<3.5 github-actions[bot] 2025-07-17 22:58:34 +02:00
5791bfb45d Built site for AMR@3.0.0.9012: 68442f3 github-actions 2025-07-17 17:54:16 +00:00
68442f3042 (v3.0.0.9012) Python wrapper fix Nick Thomson 2025-07-18 01:43:07 +08:00
b993fdd12f Built site for AMR@3.0.0.9011: 39ea5f6 github-actions 2025-07-17 17:42:41 +00:00
39ea5f6597 (v3.0.0.9011) allow names for age_groups() dr. M.S. (Matthijs) Berends 2025-07-17 19:32:46 +02:00
eb889b5de5 Built site for AMR@3.0.0.9010: 65ec098 github-actions 2025-07-17 17:19:09 +00:00
65ec098acf (v3.0.0.9010) in as.sir(), add note when higher taxonomic levels are used dr. M.S. (Matthijs) Berends 2025-07-17 19:06:12 +02:00
7d4c4ecffc Built site for AMR@3.0.0.9009: e9e3de4 github-actions 2025-07-17 15:23:46 +00:00
758fc341e8 Built site for AMR@3.0.0.9008: d94bdd2 github-actions 2025-07-17 15:16:31 +00:00
e9e3de4469 (v3.0.0.9009) fix as.sir when uti = FALSE Nick Thomson 2025-07-17 23:15:52 +08:00
d94bdd2c6a (v3.0.0.9008) fix ggplot_sir(), support lighter green for SDD dr. M.S. (Matthijs) Berends 2025-07-17 17:05:41 +02:00
8dab0a3730 (v3.0.0.9007) allow any tidyselect language in as.sir() dr. M.S. (Matthijs) Berends 2025-07-17 14:29:35 +02:00
07bc8c2004 Built site for AMR@3.0.0.9004: 0138e33 github-actions 2025-06-22 18:54:09 +00:00
0138e33ce9 Update 1-bug-report.yml Matthijs Berends 2025-06-22 20:47:31 +02:00
bf7668e26f Built site for AMR@3.0.0.9004: 1013ef6 github-actions 2025-06-13 15:13:34 +00:00
1013ef6086 Update _pkgdown.yml Matthijs Berends 2025-06-13 17:05:51 +02:00
8fd8ee508f (v3.0.0.9004) random mic fix dr. M.S. (Matthijs) Berends 2025-06-13 16:12:28 +02:00
72db2b2562 (v3.0.0.9003) eucast_rules fix, new tidymodels integration dr. M.S. (Matthijs) Berends 2025-06-13 14:03:21 +02:00
327130f5b6 Built site for AMR@3.0.0.9002: 3742e9e github-actions 2025-06-06 07:46:17 +00:00
3742e9e994 (v3.0.0.9002) website version nr dr. M.S. (Matthijs) Berends 2025-06-06 09:37:25 +02:00
b2cbb64ac9 Built site for AMR@3.0.0.9001: 753f0e1 github-actions 2025-06-04 11:19:16 +00:00
753f0e1ef9 (v3.0.0.9001) the first fixes dr. M.S. (Matthijs) Berends 2025-06-04 13:10:20 +02:00
af466f6f80 Built site for AMR@3.0.0: 1710e22 github-actions 2025-06-02 10:17:58 +00:00
1710e220dd AMR v3.0\! v3.0.0 dr. M.S. (Matthijs) Berends 2025-06-02 12:11:00 +02:00
30a07c0128 Built site for AMR@2.1.1.9290: 79038fe github-actions 2025-06-01 14:16:00 +00:00
e128e9cb57 Built site for AMR@2.1.1.9289: d384b49 github-actions 2025-06-01 14:07:43 +00:00
79038fed21 (v2.1.1.9290) typo dr. M.S. (Matthijs) Berends 2025-06-01 16:07:38 +02:00
d384b492cf (v2.1.1.9289) unit test fix dr. M.S. (Matthijs) Berends 2025-06-01 16:00:12 +02:00
02d1b619ce Built site for AMR@2.1.1.9288: 46f80b1 github-actions 2025-06-01 13:43:09 +00:00
46f80b1378 (v2.1.1.9288) mdro fix dr. M.S. (Matthijs) Berends 2025-06-01 15:35:04 +02:00
37856aa66f Built site for AMR@2.1.1.9287: 5667ce3 github-actions 2025-06-01 10:25:24 +00:00
5667ce3eae (v2.1.1.9287) fix antibiotics dr. M.S. (Matthijs) Berends 2025-06-01 12:17:47 +02:00
e70f3de02e (v2.1.1.9286) deprecate antibiotics better, add ATC for ceftaroline dr. M.S. (Matthijs) Berends 2025-06-01 11:54:40 +02:00
384690a1d1 Built site for AMR@2.1.1.9285: 80f08f9 github-actions 2025-05-21 15:01:25 +00:00
80f08f91da (v2.1.1.9285) mdro fix dr. M.S. (Matthijs) Berends 2025-05-21 16:51:40 +02:00
6a46452c67 Built site for AMR@2.1.1.9281: 8d2c5af github-actions 2025-05-20 13:14:06 +00:00
9084efe334 Built site for AMR@2.1.1.9281: 4933292 github-actions 2025-05-20 13:07:28 +00:00
8d2c5afab6 publish anaconda dr. M.S. (Matthijs) Berends 2025-05-20 15:05:24 +02:00
4933292639 publish anaconda dr. M.S. (Matthijs) Berends 2025-05-20 15:00:45 +02:00
9f654e4c24 Built site for AMR@2.1.1.9281: 2970688 github-actions 2025-05-20 12:58:01 +00:00
29706887b4 publish anaconda dr. M.S. (Matthijs) Berends 2025-05-20 14:51:09 +02:00
a7bbc3ea9c Built site for AMR@2.1.1.9281: a94452b github-actions 2025-05-20 09:39:09 +00:00
a94452b9be (v2.1.1.9281) speed improvement is_sir_eligible dr. M.S. (Matthijs) Berends 2025-05-20 11:31:42 +02:00
11b4f3ac31 Built site for AMR@2.1.1.9279: 26447fe github-actions 2025-05-16 16:00:08 +00:00
26447fe29b fix website dr. M.S. (Matthijs) Berends 2025-05-16 17:53:21 +02:00
38cebc1541 (v2.1.1.9279) fix documentation, add foreign S3 exports to functions dr. M.S. (Matthijs) Berends 2025-05-16 16:55:29 +02:00
139f79d372 (v2.1.1.9278) support AMR selectors in custom MDRO guideline dr. M.S. (Matthijs) Berends 2025-05-16 11:20:19 +02:00
da2f868615 Built site for AMR@2.1.1.9277: b8d7c8a github-actions 2025-05-15 11:15:10 +00:00
b8d7c8af7f (v2.1.1.9277) mdro fix dr. M.S. (Matthijs) Berends 2025-05-15 13:07:47 +02:00
16aa35c2cd Built site for AMR@2.1.1.9276: 4b17174 github-actions 2025-05-15 08:49:45 +00:00
4b171745de (v2.1.1.9276) mdro() fix dr. M.S. (Matthijs) Berends 2025-05-15 10:39:48 +02:00
2266fa7c29 Built site for AMR@2.1.1.9275: 48a59ee github-actions 2025-05-13 17:05:23 +00:00
48a59ee31a (v2.1.1.9275) include guideline name in MDRO verbose output dr. M.S. (Matthijs) Berends 2025-05-13 18:56:12 +02:00
2118d4ea5f Built site for AMR@2.1.1.9274: 7d45ca9 github-actions 2025-05-12 10:43:21 +00:00
7d45ca9fbf (v2.1.1.9274) Improve is_sir_eligible, rename verbose MDRO output dr. M.S. (Matthijs) Berends 2025-05-12 12:35:11 +02:00
0f8fdaa2cb Built site for AMR@2.1.1.9273: 3f9012d github-actions 2025-05-05 09:53:58 +00:00
3f9012dc47 (v2.1.1.9273) fix as.ab() / as.av() dr. M.S. (Matthijs) Berends 2025-05-05 11:45:33 +02:00
8ca7c05e80 Built site for AMR@2.1.1.9272: fcd8b95 github-actions 2025-05-04 16:58:18 +00:00
fcd8b95e51 (v2.1.1.9272) mo codes sensititre dr. M.S. (Matthijs) Berends 2025-05-04 18:50:25 +02:00
a778eb9bcf (v2.1.1.9272) (v2.1.1.9271) add sensititre AB and animal codes dr. M.S. (Matthijs) Berends 2025-05-04 16:38:09 +02:00
bb8c39a64e Built site for AMR@2.1.1.9270: dc5559a github-actions 2025-05-04 12:34:00 +00:00
dc5559a2c4 (v2.1.1.9270) Add support for Korean, fix ATCs dr. M.S. (Matthijs) Berends 2025-05-04 14:24:43 +02:00
12070624fb Built site for AMR@2.1.1.9269: b8f0f64 github-actions 2025-05-02 17:37:36 +00:00
b8f0f64287 (v2.1.1.9269) Support 7 new languages dr. M.S. (Matthijs) Berends 2025-05-02 19:25:19 +02:00