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python-wrapper

sir-s3-update

#109

#117

#134

#181

#192

#205

#212

#221

#226

#226

#65

#67

#68

#71

#72

#77

#93

#97

v0.1.0

v0.1.1

v0.2.0

v0.3.0

v0.4.0

v0.5.0

v0.6.0

v0.6.1

v0.7.0

v0.7.1

v0.8.0

v0.9.0

v1.0.0

v1.0.1

v1.1.0

v1.2.0

v1.3.0

v1.4.0

v1.5.0

v1.6.0

v1.7.0

v1.7.1

v1.8.0

v1.8.1

v1.8.2

v2.0.0

v2.1.0

v2.1.1

v3.0.0

v3.0.1

16b4c74d44 (v1.7.1.9013) temp fix for ggplot2 bug #4511 dr. M.S. (Matthijs) Berends 2021-07-04 22:10:46 +02:00
350dbe6a11 (v1.7.1.9012) update unit tests dr. M.S. (Matthijs) Berends 2021-07-04 20:25:30 +02:00
5b5741f681 (v1.7.1.9011) subsetting taxonomy fix dr. M.S. (Matthijs) Berends 2021-07-04 15:26:50 +02:00
3bd50710e8 (v1.7.1.9010) fix for count_* and proportion_* dr. M.S. (Matthijs) Berends 2021-07-04 12:00:41 +02:00
3e26929838 (v1.7.1.9009) fix for ab class selectors dr. M.S. (Matthijs) Berends 2021-07-03 21:56:53 +02:00
c8491d07f8 (v1.7.1.9008) unit tests dr. M.S. (Matthijs) Berends 2021-06-23 10:19:38 +02:00
95050ee3e0 (v1.7.1.9007) Updated antibiotics dataset, fixes #41 dr. M.S. (Matthijs) Berends 2021-06-23 10:03:17 +02:00
1dc9d237f6 (v1.7.1.9006) unit tests dr. M.S. (Matthijs) Berends 2021-06-22 13:09:41 +02:00
d04e83f494 (v1.7.1.9005) ab class selectors for R-3.0 and R-3.1 dr. M.S. (Matthijs) Berends 2021-06-22 12:16:42 +02:00
c44d9392ca (v1.7.1.9004) more extensive unit tests dr. M.S. (Matthijs) Berends 2021-06-15 10:51:04 +02:00
556bf0014d (v1.7.1.9003) unit test dr. M.S. (Matthijs) Berends 2021-06-14 22:37:05 +02:00
99be4c7e7e (v1.7.1.9002) ab class selectors update dr. M.S. (Matthijs) Berends 2021-06-14 22:04:04 +02:00
683a0e748a (v1.7.1.9001) unit tests dr. M.S. (Matthijs) Berends 2021-06-05 15:12:01 +02:00
1908e7cc7a (v1.7.1.9000) ab_class update, unit tests dr. M.S. (Matthijs) Berends 2021-06-04 21:07:55 +02:00
7e70403efb (v1.7.1) New CRAN release v1.7.1 dr. M.S. (Matthijs) Berends 2021-06-03 15:19:21 +02:00
279376fccb (v1.7.0.9002) old MO codes dr. M.S. (Matthijs) Berends 2021-06-01 16:36:33 +02:00
bef0f42f66 (v1.7.0.9001) CLSI 2020 guideline dr. M.S. (Matthijs) Berends 2021-06-01 15:33:06 +02:00
f406319503 (v1.7.0.9000) package size dr. M.S. (Matthijs) Berends 2021-05-30 22:14:38 +02:00
f1d9b489c5 (v1.7.0) unit tests v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-26 14:04:12 +02:00
41d279daa1 (v1.7.0) v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-26 11:10:34 +02:00
a12572c752 doc update dr. M.S. (Matthijs) Berends 2021-05-26 11:00:32 +02:00
a33c8a51a2 v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-26 10:59:54 +02:00
55457d0ab6 v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-25 10:00:11 +02:00
d0f38a03d5 v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-24 15:29:31 +02:00
ac73a8d849 v1.7.0 dr. M.S. (Matthijs) Berends 2021-05-24 15:29:17 +02:00
e5599bc694 (v1.6.0.9065) unit tests dr. M.S. (Matthijs) Berends 2021-05-24 11:01:32 +02:00
4fbf9e1720 (v1.6.0.9064) prepare new release dr. M.S. (Matthijs) Berends 2021-05-24 09:34:08 +02:00
a13fd98e8b (v1.6.0.9063) prepare new release dr. M.S. (Matthijs) Berends 2021-05-24 09:00:11 +02:00
06302d296a (v1.6.0.9062) code consistency dr. M.S. (Matthijs) Berends 2021-05-24 00:06:28 +02:00
07939b1a14 (v1.6.0.9061) age() update dr. M.S. (Matthijs) Berends 2021-05-23 23:11:16 +02:00
fa2f5214b9 (v1.6.0.9060) unit tests dr. M.S. (Matthijs) Berends 2021-05-22 10:05:59 +02:00
adca43f8d9 covr update dr. M.S. (Matthijs) Berends 2021-05-22 09:22:39 +02:00
0b1f59edec (v1.6.0.9058) unit tests dr. M.S. (Matthijs) Berends 2021-05-22 08:58:51 +02:00
808024c5f4 covr dr. M.S. (Matthijs) Berends 2021-05-21 23:13:01 +02:00
65a8b58aa6 (v1.6.0.9056) support codecov again dr. M.S. (Matthijs) Berends 2021-05-21 20:30:48 +02:00
b210f1327c (v1.6.0.9055) support codecov again dr. M.S. (Matthijs) Berends 2021-05-21 20:20:51 +02:00
fecc5d183c (v1.6.0.9054) unit tests dr. M.S. (Matthijs) Berends 2021-05-20 15:06:08 +02:00
69a656abc0 (v1.6.0.9053) unit tests dr. M.S. (Matthijs) Berends 2021-05-20 13:42:17 +02:00
4a2a48b7c1 (v1.6.0.9052) unit tests dr. M.S. (Matthijs) Berends 2021-05-20 11:42:39 +02:00
d1b1828ab8 unit test dr. M.S. (Matthijs) Berends 2021-05-20 10:55:07 +02:00
04ef5b28e7 (v1.6.0.9050) printing NA in custom_eucast_rules() dr. M.S. (Matthijs) Berends 2021-05-20 10:10:40 +02:00
9a2879cba9 (v1.6.0.9049) unit tests dr. M.S. (Matthijs) Berends 2021-05-20 00:07:27 +02:00
2413efd5c1 (v1.6.0.9048) ab selectors overhaul dr. M.S. (Matthijs) Berends 2021-05-19 22:55:42 +02:00
6920c0be41 (v1.6.0.9047) filter_ab_class() fixes dr. M.S. (Matthijs) Berends 2021-05-18 11:29:31 +02:00
7028dcfa5b that 1 AM error dr. M.S. (Matthijs) Berends 2021-05-18 01:05:44 +02:00
d67371acd1 that 1 AM error dr. M.S. (Matthijs) Berends 2021-05-18 00:58:39 +02:00
cfb7df823e (v1.6.0.9044) betalactams() selector dr. M.S. (Matthijs) Berends 2021-05-18 00:53:04 +02:00
be49131ed7 (v1.6.0.9043) translation update dr. M.S. (Matthijs) Berends 2021-05-17 19:43:01 +02:00
83fec69a03 (v1.6.0.9042) translation update dr. M.S. (Matthijs) Berends 2021-05-17 11:26:12 +02:00
916df6e90c (v1.6.0.9041) filter_ab_class() fix dr. M.S. (Matthijs) Berends 2021-05-16 10:50:00 +02:00
00496e45b7 (v1.6.0.9040) unit tests dr. M.S. (Matthijs) Berends 2021-05-16 09:25:36 +02:00
6c3ab19e3a (v1.6.0.9038) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 23:47:36 +02:00
3619c1327c (v1.6.0.9037) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 23:36:02 +02:00
73fb0374c3 (v1.6.0.9036) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 23:25:10 +02:00
229e1bb407 (v1.6.0.9035) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 22:55:12 +02:00
6e60ddf8d7 (v1.6.0.9034) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 22:35:57 +02:00
54dd868b22 (v1.6.0.9034) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 22:30:11 +02:00
0ce9fb4da2 (v1.6.0.9033) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 22:11:36 +02:00
86736ab9a7 (v1.6.0.9032) unit tests dr. M.S. (Matthijs) Berends 2021-05-15 21:54:56 +02:00
d8c91d5876 (v1.6.0.9031) tinytest unit tests dr. M.S. (Matthijs) Berends 2021-05-15 21:36:22 +02:00
9a381c8d18 (v1.6.0.9030) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 23:07:31 +02:00
c17acbe712 unit test fix dr. M.S. (Matthijs) Berends 2021-05-13 22:44:59 +02:00
9ed2f6490f (v1.6.0.9028) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 22:44:11 +02:00
5b9fb8daf4 (v1.6.0.9027) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 21:54:15 +02:00
b1d942be91 (v1.6.0.9026) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 21:16:22 +02:00
994d157aa6 (v1.6.0.9025) unit test update dr. M.S. (Matthijs) Berends 2021-05-13 20:53:56 +02:00
9d9d62eba4 (v1.6.0.9024) unit test update dr. M.S. (Matthijs) Berends 2021-05-13 20:49:47 +02:00
aeea00881e (v1.6.0.9023) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 19:31:47 +02:00
655b813e99 (v1.6.0.9022) unit test fix dr. M.S. (Matthijs) Berends 2021-05-13 15:56:12 +02:00
29dbfa2f49 (v1.6.0.9021) join functions update dr. M.S. (Matthijs) Berends 2021-05-12 18:15:03 +02:00
3319fbae58 (v1.6.0.9020) fix for skimr in dplyr 1.0.6 dr. M.S. (Matthijs) Berends 2021-05-06 15:17:11 +02:00
5899678b74 (v1.6.0.9019) website fix dr. M.S. (Matthijs) Berends 2021-05-05 15:47:39 +02:00
0aca719929 (v1.6.0.9018) unit tests dr. M.S. (Matthijs) Berends 2021-05-04 15:20:43 +02:00
5679ccdaf9 (v1.6.0.9017) extra system codes dr. M.S. (Matthijs) Berends 2021-05-04 12:47:33 +02:00
f33e61bac7 (v1.6.0.9016) website update and c() fixes dr. M.S. (Matthijs) Berends 2021-05-03 13:06:43 +02:00
12a8d59869 (v1.6.0.9015) italicise_taxonomy dr. M.S. (Matthijs) Berends 2021-05-03 10:47:32 +02:00
e405de079c (v1.6.0.9014) as.rsi() for numeric values dr. M.S. (Matthijs) Berends 2021-04-30 13:18:48 +02:00
a9fd4aa49f (v1.6.0.9013) website update dr. M.S. (Matthijs) Berends 2021-04-29 17:16:30 +02:00
5e06b20d43 (v1.6.0.9012) unit tests dr. M.S. (Matthijs) Berends 2021-04-27 11:28:17 +02:00
c5fff1c95c (v1.6.0.9011) unit tests dr. M.S. (Matthijs) Berends 2021-04-27 10:27:13 +02:00
93683a4ae2 (v1.6.0.9010) big first_isolate() update dr. M.S. (Matthijs) Berends 2021-04-26 23:57:37 +02:00
5f9e7bd3ee (v1.6.0.9009) key_antibiotics update dr. M.S. (Matthijs) Berends 2021-04-23 16:13:26 +02:00
70b803dbb6 (v1.6.0.9008) unlike, bugfix for col_mo naming dr. M.S. (Matthijs) Berends 2021-04-23 09:59:36 +02:00
c6289c3fc3 (v1.6.0.9007) documentation custom eucast rules, progress bar as.mo dr. M.S. (Matthijs) Berends 2021-04-20 10:46:17 +02:00
de66eccf43 (v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi dr. M.S. (Matthijs) Berends 2021-04-16 14:59:57 +02:00
24ac18a99d (v1.6.0.9005) unit test fix dr. M.S. (Matthijs) Berends 2021-04-16 13:24:59 +02:00
9842ef9660 (v1.6.0.9004) unit test fix dr. M.S. (Matthijs) Berends 2021-04-16 12:02:57 +02:00
00d3e437a8 (v1.6.0.9003) like() fix dr. M.S. (Matthijs) Berends 2021-04-16 11:41:05 +02:00
d277d58475 (v1.6.0.9002) R-3.0 installation fix dr. M.S. (Matthijs) Berends 2021-04-12 14:24:40 +02:00
6ff5448192 (v1.6.0.9001) support Inf for episodes dr. M.S. (Matthijs) Berends 2021-04-12 12:35:13 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules dr. M.S. (Matthijs) Berends 2021-04-07 08:37:42 +02:00
551f99dc8f v1.6.0 v1.6.0 dr. M.S. (Matthijs) Berends 2021-03-15 07:23:21 +01:00
4e0a9533ad (v1.5.0.9041) SNOMED update dr. M.S. (Matthijs) Berends 2021-03-11 21:42:30 +01:00
8d6ceb6a15 (v1.5.0.9040) removal of isolate_identifier dr. M.S. (Matthijs) Berends 2021-03-08 09:44:17 +01:00
a7c9b4c295 (v1.5.0.9039) handle first isolates for missing antibiograms dr. M.S. (Matthijs) Berends 2021-03-08 02:38:32 +01:00
461793dc34 (v1.5.0.9038) quick test dr. M.S. (Matthijs) Berends 2021-03-08 01:24:37 +01:00
a12975bc6e (v1.5.0.9037) quick test dr. M.S. (Matthijs) Berends 2021-03-08 00:13:13 +01:00
68163e3089 (v1.5.0.9036) quick test dr. M.S. (Matthijs) Berends 2021-03-07 22:45:05 +01:00
2f0fc3cab7 (v1.5.0.9035) quick test dr. M.S. (Matthijs) Berends 2021-03-07 22:15:25 +01:00
450bbe5fb7 (v1.5.0.9034) unit test fix dr. M.S. (Matthijs) Berends 2021-03-07 21:16:45 +01:00