dr. M.S. (Matthijs) Berends acb534102b new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

..

figures

website update

2022-12-11 11:44:29 +01:00

ab_from_text.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

ab_property.Rd

improve as.mo()

2023-05-24 15:55:53 +02:00

add_custom_antimicrobials.Rd

check for 2.0

2023-03-12 13:02:37 +01:00

add_custom_microorganisms.Rd

unit testing R4.3

2023-05-26 20:37:00 +02:00

age_groups.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

age.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

AMR-deprecated.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

AMR-options.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

AMR.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

antibiogram.Rd

add oxygen tolerance

2023-05-11 21:56:27 +02:00

antibiotic_class_selectors.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

antibiotics.Rd

updated microorganism codes

2023-05-26 16:10:01 +02:00

as.ab.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.av.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.disk.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

as.mic.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

as.mo.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

as.sir.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

atc_online.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

av_from_text.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

av_property.Rd

improve as.mo()

2023-05-24 15:55:53 +02:00

availability.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

bug_drug_combinations.Rd

fix for antibiograms on R < 3.5

2023-02-24 09:43:10 +01:00

clinical_breakpoints.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

count.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

custom_eucast_rules.Rd

add oxygen tolerance

2023-05-11 21:56:27 +02:00

dosage.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

eucast_rules.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

example_isolates_unclean.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

example_isolates.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

first_isolate.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

g.test.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

get_episode.Rd

update NEWS

2023-03-11 14:43:31 +01:00

ggplot_pca.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

ggplot_sir.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

guess_ab_col.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

intrinsic_resistant.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

italicise_taxonomy.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

join.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

key_antimicrobials.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

kurtosis.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

like.Rd

fix documentation

2023-03-16 08:55:37 +01:00

mdro.Rd

fix documentation

2023-03-16 08:55:37 +01:00

mean_amr_distance.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

microorganisms.codes.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

microorganisms.groups.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

microorganisms.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

mo_matching_score.Rd

new species groups, updated clinical breakpoints

2023-07-08 17:30:05 +02:00

mo_property.Rd

updated microorganism codes

2023-05-26 16:10:01 +02:00

mo_source.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

pca.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

plot.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

proportion.Rd

documentation for 'data.table' AB selectors

2023-03-11 16:54:02 +01:00

random.Rd

Update clinical breakpoints and fix some as.mo() bugs (#117)

2023-06-22 15:10:59 +02:00

resistance_predict.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

skewness.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

translate.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

WHOCC.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

WHONET.Rd

fix for antibiogram(), transform WHONET data set to sir

2023-02-22 15:40:05 +01:00