P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-04-28 14:43:52 +02:00
Code Releases Activity
AMR/reference
History
github-actions 97df961c58 Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
..
figures
Built site for AMR: 1.8.2.9061@eed1c14
2022-12-11 10:50:34 +00:00
%like_case%.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
%like%.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
%unlike_case%.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
%unlike%.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
3MRGN.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
4MRGN.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_atc_group1.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_atc_group2.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_atc.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_cid.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_class.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
ab_ddd_units.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_ddd.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_from_text.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
ab_group.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_info.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_loinc.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_name.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_property.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
ab_selector.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
ab_synonyms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_tradenames.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab_url.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ab.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
add_custom_antimicrobials.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
add_custom_microorganisms.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
administrable_iv.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
administrable_per_os.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
age_groups-1.png
Built site for AMR@2.1.1.9083: 8907e8e
2024-09-30 17:20:49 +00:00
age_groups.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
age.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
all_antimicrobials.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
aminoglycosides.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
aminopenicillins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
amr_class.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
amr_distance_from_row.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
amr_selector.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
AMR-deprecated.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
AMR-options.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
AMR-package.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
AMR.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
anti_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
antibiogram-1.png
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
antibiogram-2.png
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
antibiogram-3.png
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
antibiogram-4.png
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
antibiogram.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
antibiotics.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
antifungals.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
antimicrobial_class_selectors.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
antimicrobials_equal.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
antimycobacterials.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
antivirals.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
as.ab.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.av.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.disk.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.mic-1.png
cli-154-2226
2024-04-19 08:24:46 +00:00
as.mic-2.png
Built site for AMR@2.1.1.9122: 2e31ec1
2024-12-20 10:03:24 +00:00
as.mic-3.png
Built site for AMR@2.1.1.9086: 50a9f8f
2024-10-02 08:29:15 +00:00
as.mic-4.png
Built site for AMR@2.1.1.9086: 50a9f8f
2024-10-02 08:29:15 +00:00
as.mic.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.mo.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.sir-1.png
Built site for AMR: 1.8.2.9096@98e62c9
2023-01-21 22:53:21 +00:00
as.sir-2.png
Built site for AMR: 1.8.2.9096@98e62c9
2023-01-21 22:53:21 +00:00
as.sir.data.frame.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
as.sir.default.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
as.sir.disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
as.sir.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
as.sir.mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
atc_online_ddd_units.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
atc_online_ddd.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
atc_online_groups.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
atc_online.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
ATC.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
autoplot.antibiogram.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
autoplot.disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
autoplot.mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
autoplot.resistance_predict.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
autoplot.sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_atc.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_cid.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_ddd_units.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_ddd.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_from_text.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
av_group.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_info.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_loinc.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_name.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_property.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
av_synonyms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_tradenames.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av_url.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
av.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
availability.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
betalactams_with_inhibitor.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
betalactams.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
brmo.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
BRMO.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
bug_drug_combinations.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
carbapenems.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins_1st.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins_2nd.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins_3rd.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins_4th.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins_5th.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
cephalosporins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
clear_custom_antimicrobials.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
clear_custom_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
clinical_breakpoints.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
count_all.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_df.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_I.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_IR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_R.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_resistant.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_S.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_SI.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count_susceptible.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
count.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
custom_eucast_rules.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
custom_mdro_guideline.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
dosage.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
droplevels.mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
eucast_dosage.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
eucast_exceptional_phenotypes.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
eucast_rules.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
EUCAST.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
example_isolates_unclean.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
example_isolates.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
export_ncbi_biosample.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
facet_sir.html
Built site for AMR@2.1.1.9118: 7e7db6b
2024-12-15 19:23:39 +00:00
filter_first_isolate.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
first_isolate.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
fluoroquinolones.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
format.bug_drug_combinations.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
full_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
g.test.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
geom_sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
get_AMR_locale.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
get_episode.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
get_mo_source.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ggplot_pca-1.png
Built site for AMR: 2.1.1.9002@c746176
2023-12-03 10:41:04 +00:00
ggplot_pca-2.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_pca.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
ggplot_sir_predict.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
ggplot_sir-1.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-2.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-3.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-4.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-5.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-6.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-7.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-8.png
Built site for AMR@2.1.1.9083: 8907e8e
2024-09-30 17:20:49 +00:00
ggplot_sir-9.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
ggplot_sir-10.png
Built site for AMR@2.1.1.9122: 2e31ec1
2024-12-20 10:03:24 +00:00
ggplot_sir.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
glycopeptides.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
guess_ab_col.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
index.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
inner_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
inner_join.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
intrinsic_resistant.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
is_new_episode.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is_sir_eligible.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.ab.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.av.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.mo.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
is.sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
isoxazolylpenicillins.html
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
italicise_taxonomy.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
italicize_taxonomy.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
join.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
key_antimicrobials.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
knit_print.antibiogram.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
kurtosis.data.frame.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
kurtosis.default.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
kurtosis.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
kurtosis.matrix.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
labels_sir_count.html
Built site for AMR@2.1.1.9118: 7e7db6b
2024-12-15 19:23:39 +00:00
left_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
like.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
lincosamides.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
lipoglycopeptides.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
macrolides.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
mdr_cmi2012.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mdr_tb.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
MDR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mdro.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mean_amr_distance.data.frame.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mean_amr_distance.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mean_amr_distance.sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
microorganisms.codes.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
microorganisms.groups.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
microorganisms.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mo_authors.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_class.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_cleaning_regex.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_current.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_domain.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_failures.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_family.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_fullname.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_gbif.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_genus.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_gramstain.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_group_members.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_info.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_is_anaerobic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_is_gram_negative.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_is_gram_positive.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_is_intrinsic_resistant.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_is_yeast.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_kingdom.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_lpsn.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_matching_score.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mo_mycobank.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_name.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_order.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_oxygen_tolerance.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_pathogenicity.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_phylum.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_property.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mo_rank.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_ref.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_renamed.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_reset_session.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_shortname.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_snomed.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_source.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
mo_species.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_status.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_subspecies.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_synonyms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_taxonomy.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_type.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_uncertainties.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_url.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo_year.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
mo.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
monobactams.html
Built site for AMR@2.1.1.9141: 8ba2e4e
2025-02-07 17:09:00 +00:00
mrgn.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
n_sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
NA_disk_.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
NA_mic_.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
NA_sir_.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
nitrofurans.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
not_intrinsic_resistant.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
oxazolidinones.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
pca-1.png
Built site for AMR: 2.1.1.9001@6f417d0
2023-12-03 00:14:24 +00:00
pca-2.png
Built site for AMR@2.1.1.9073: 2975697
2024-09-19 12:05:20 +00:00
pca.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
PDR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
penicillins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
phenicols.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
plot-1.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-2.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-3.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-4.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-5.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-6.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-7.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-8.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-9.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-10.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-11.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-12.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-13.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-14.png
Built site for AMR@2.1.1.9144: 5ff9210
2025-02-11 16:30:48 +00:00
plot-15.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-16.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-17.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-18.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-19.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-20.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot-21.png
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot.antibiogram.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
plot.disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
plot.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
plot.mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
plot.resistance_predict.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
plot.sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
polymyxins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
portion.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_df.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_I.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_IR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_R.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_S.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion_SI.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
proportion.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
quinolones.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
random_disk.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
random_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
random_sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
random.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
rescale_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
reset_AMR_locale.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
resistance_predict-1.png
Built site for AMR@2.1.1.9123: 08ddbaa
2025-01-15 15:25:08 +00:00
resistance_predict-2.png
Built site for AMR@2.1.1.9123: 08ddbaa
2025-01-15 15:25:08 +00:00
resistance_predict-3.png
Built site for AMR@2.1.1.9123: 08ddbaa
2025-01-15 15:25:08 +00:00
resistance_predict-4.png
Built site for AMR@2.1.1.9123: 08ddbaa
2025-01-15 15:25:08 +00:00
resistance_predict.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
resistance.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
retrieve_wisca_parameters.html
Built site for AMR@2.1.1.9140: baea432
2025-02-05 19:58:39 +00:00
rifamycins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
right_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
scale_color_mic.html
Built site for AMR@2.1.1.9144: 07757c9
2025-02-11 07:56:27 +00:00
scale_colour_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
scale_colour_sir.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
scale_fill_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
scale_fill_sir.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
scale_sir_colours.html
Built site for AMR@2.1.1.9118: 7e7db6b
2024-12-15 19:23:39 +00:00
scale_x_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
scale_x_sir.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
scale_y_mic.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
scale_y_percent.html
Built site for AMR@2.1.1.9118: 7e7db6b
2024-12-15 19:23:39 +00:00
semi_join_microorganisms.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
set_ab_names.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
set_AMR_locale.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
set_mo_source.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
sir_confidence_interval.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
sir_df.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
sir_interpretation_history.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
sir_predict.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
sir.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
skewness.data.frame.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
skewness.default.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
skewness.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
skewness.matrix.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
streptogramins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
susceptibility.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
tetracyclines.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
theme_sir.html
Built site for AMR@2.1.1.9118: 7e7db6b
2024-12-15 19:23:39 +00:00
top_n_microorganisms.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
translate_AMR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00
translate.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
trimethoprims.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
ureidopenicillins.html
Built site for AMR@2.1.1.9125: 92c4fc0
2025-01-17 11:18:49 +00:00
WHOCC.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
WHONET.html
Built site for AMR@2.1.1.9146: bd2887b
2025-02-13 18:57:22 +00:00
wisca.html
Built site for AMR@2.1.1.9133: 9520977
2025-01-27 21:16:06 +00:00
XDR.html
Built site for AMR@2.1.1.9063: 640888f
2024-07-16 13:00:55 +00:00