update
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@ -6,11 +6,12 @@ import pickle
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import yaml
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#import matplotlib.font_manager
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from matplotlib import rc
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rc('font',**{'family':'sans-serif','sans-serif':['Helvetica']})
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rc('text', usetex=True)
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import matplotlib.font_manager
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def is_ipython():
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''' Check if script is run in IPython.
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@ -98,10 +99,10 @@ def plot_parameters(dat, input_file, deparameterize=False, ref=None):
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ids.append(bnd_c['id'])
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ids_type.append('windkessel')
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current_val.append(bnd_set['parameters']['R_d'])
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labels.append('$R_' + str(bnd_c['id']))
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labels.append('$R_' + str(bnd_c['id']-3))
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if RC_flag:
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current_val_C.append(bnd_set['parameters']['C'])
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labels.append('$C_' + str(bnd_c['id']))
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labels.append('$C_' + str(bnd_c['id']-3))
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elif 'dirichlet' in bnd_c['type']:
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@ -112,10 +113,9 @@ def plot_parameters(dat, input_file, deparameterize=False, ref=None):
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fig1, axes1 = plt.subplots(1,1,figsize=(12,6))
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fig1, axes1 = plt.subplots(1,1,figsize=(12,7))
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if RC_flag:
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fig2, axes2 = plt.subplots(1,1,figsize=(12,6))
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fig2, axes2 = plt.subplots(1,1,figsize=(12,7))
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t = dat['times']
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@ -162,13 +162,22 @@ def plot_parameters(dat, input_file, deparameterize=False, ref=None):
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if ids_type[i] == 'dirichlet':
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pass
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#axes3.plot(t, curve , '-', color=col_,label= legends_ + '= ' + str(rec_value) + '/' + str(true_values[cur_key]) + '$')
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#axes3.fill_between(t, curve - np.sqrt(P[:, idx, idx]), curve + np.sqrt(P[:, idx, idx]), alpha=0.3, color=col_)
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#legends_=next(legends)
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#axes3.plot(t, dash_curve , color=col_,ls='--')
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fig3, axes3 = plt.subplots(1,1,figsize=(12,5))
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axes3.plot(t, curve , '-', color=col_,label= legends_ + '= ' + str(rec_value) + '/' + str(true_values[cur_key]) + '$', linewidth = 4)
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axes3.fill_between(t, std_down, std_up, alpha=0.3, color=col_)
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legends_=next(legends)
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axes3.plot(t, dash_curve , color=col_,ls='--')
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axes3.set_ylabel(r'$U$',fontsize=36)
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axes3.legend(fontsize=36,loc='upper right')
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axes3.set_xlim([-0.01,0.81])
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axes3.set_xlabel(r'$t (s)$',fontsize=36)
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axes3.set_box_aspect(1/4)
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plt.xticks(fontsize=28)
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plt.yticks(fontsize=28)
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plt.savefig('U.png')
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plt.close(fig3)
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else:
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axes1.plot(t, curve , '-', color=col_,label= legends_ + '= ' + str(rec_value) + '/' + str(true_values[cur_key]) + '$', linewidth = 2)
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axes1.plot(t, curve , '-', color=col_,label= legends_ + '= ' + str(rec_value) + '/' + str(true_values[cur_key]) + '$', linewidth = 3)
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axes1.fill_between(t, std_down, std_up, alpha=0.3, color=col_)
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axes1.plot(t, dash_curve , color=col_,ls='--')
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legends_=next(legends)
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@ -199,19 +208,23 @@ def plot_parameters(dat, input_file, deparameterize=False, ref=None):
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idx +=1
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axes1.set_ylabel(r'$R_d$',fontsize=22)
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axes1.legend(fontsize=18,loc='upper right')
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axes1.set_ylabel(r'$R_d$',fontsize=36)
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axes1.legend(fontsize=36,loc='upper right')
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axes1.set_xlim([-0.01,0.81])
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axes1.set_ylim([1700,35000])
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axes1.set_xlabel(r'$t (s)$',fontsize=22)
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plt.savefig('C.png')
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axes1.set_ylim([1700,45000])
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axes1.set_box_aspect(1/2)
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plt.xticks(fontsize=28)
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plt.yticks(fontsize=28)
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axes1.set_xlabel(r'$t (s)$',fontsize=36)
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plt.savefig('Rd.png')
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if RC_flag:
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axes2.set_ylabel(r'$C$',fontsize=22)
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axes2.set_ylabel(r'$C$',fontsize=24)
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axes2.legend(fontsize=18,loc='upper right')
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axes2.set_xlim([-0.01,0.81])
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axes2.set_xlabel(r'$t (s)$',fontsize=22)
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axes2.set_xlabel(r'$t (s)$',fontsize=24)
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fig2.savefig('C.png')
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fig1.savefig('Rd.png')
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