adding kalman

2020-11-23 13:41:11 +01:00
parent 8196e39547
commit ccf35cea16
19 changed files with 2177 additions and 6 deletions
--- a/kalman/other/batch_gen_measurements.py
+++ b/kalman/other/batch_gen_measurements.py
@@ -0,0 +1,137 @@
+from common import inout
+from gen_measurements_from_checkpoints import generate, copy_inputfile
+
+path_chan2d = './projects/DA_testbench/input/channel2d/measurements/'
+inputfiles_chan2d = [
+    # 'chan2d_CT_Rtop0.9_slip0.332_no-pen_h0.05_noise0.yaml',
+    # 'chan2d_CT_Rtop0.9_slip0.332_no-pen_h0.05_noise6.5.yaml',
+    # # # 'chan2d_CT_Rtop0.9_slip0.332_no-pen_dt0.001_h0.05_noise0.yaml',
+    # # # 'chan2d_CT_Rtop0.9_slip0.332_no-pen_dt0.001_h0.05_noise6.5.yaml',
+    # 'chan2d_CT_Rtop0.9_slip0.332_trans3600_h0.05_noise0.yaml',
+    'chan2d_CT_Rtop0.9_slip0.332_trans3600_h0.05_noise6.5.yaml',
+    # 'chan2d_CT_R1_no-slip_h0.05_noise0.yaml',
+    # 'chan2d_CT_R1_no-slip_h0.05_noise6.5.yaml',
+    # # 'chan2d_CT_R1_no-slip_steady_h0.05_noise0.yaml',
+    # # 'chan2d_CT_R1_no-slip_steady_h0.05_noise6.5.yaml',
+    # 'chan2d_mono_Rtop0.9_slip0.332_no-pen_h0.05_noise0.yaml',
+    # 'chan2d_mono_Rtop0.9_slip0.332_no-pen_h0.05_noise6.5.yaml',
+    # # 'chan2d_mono_Rtop0.9_slip0.332_no-pen_dt0.001_h0.05_noise0.yaml',
+    # # 'chan2d_mono_Rtop0.9_slip0.332_no-pen_dt0.001_h0.05_noise6.5.yaml',
+    # 'chan2d_mono_Rtop0.9_slip0.332_trans3600_h0.05_noise0.yaml',
+    # 'chan2d_mono_Rtop0.9_slip0.332_trans3600_h0.05_noise6.5.yaml',
+    # 'chan2d_mono_R1_no-slip_h0.05_noise0.yaml',
+    # 'chan2d_mono_R1_no-slip_h0.05_noise6.5.yaml',
+    # # 'chan2d_mono_R1_no-slip_steady_h0.05_noise0.yaml',
+    # # 'chan2d_mono_R1_no-slip_steady_h0.05_noise6.5.yaml',
+    # #
+    # # 'chan2d_CT_Rtop0.9_slip0.332_no-pen_h0.05_state_noise0.yaml',
+]
+
+path_coa2d = './projects/DA_testbench/input/coa2d/measurements/'
+inputfiles_coa2d = [
+    # CT H=h, DT=dt
+    # 'coa2d_CT_d0.1_slip0.001_trans1000_h0.025_supg_noise0.yaml',
+    # 'coa2d_CT_d0.1_slip0.332_trans3600_h0.025_supg_noise0.yaml',
+    # 'coa2d_CT_d0.1_slip0.001_trans1000_h0.025_supg_noise10.yaml',
+    # 'coa2d_CT_d0.1_slip0.332_trans3600_h0.025_supg_noise10.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_noise10.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_noise0.yaml',
+    # MONO
+    # 'coa2d/coa2d_mono_d0.1_slip0.001_trans1000_h0.025_supg.yaml',
+    # 'coa2d/coa2d_mono_d0.1_slip0.332_trans3600_h0.025_supg.yaml',
+    # 'coa2d/coa2d_mono_d0_noslip_h0.025_supg.yaml',
+    # H, DT var
+    # 'coa2d_CT_d0_noslip_h0.025_supg_d0.1_H0.1.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_DT0.01_H0.025.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_DT0.02_H0.025.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_DT0.02_H0.1.yaml',
+    # PLUG FLOW
+    # 'coa2d_CT_d0_noslip_h0.025_supg_plug_d0_H0.1.yaml',
+    'coa2d_CT_d0_noslip_h0.025_supg_plug_d0.1_H0.1.yaml',
+    # 'coa2d_CT_d0_noslip_h0.025_supg_plug_d0.2_H0.2.yaml',
+]
+
+path_pipe3d = './projects/DA_testbench/input/pipe3d/measurements/'
+inputfiles_pipe3d = [
+    'pipe3d_CT_R0.9_slip0.332_trans3600_h0.05_noise0.yaml',
+    'pipe3d_CT_R0.9_slip0.332_trans3600_h0.05_noise10.yaml',
+    'pipe3d_CT_R0.9_slip0.332_trans3600_h0.1_noise0.yaml',
+    'pipe3d_CT_R0.9_slip0.332_trans3600_h0.1_noise10.yaml',
+    'pipe3d_CT_R1_noslip_h0.1_noise10.yaml',
+    'pipe3d_CT_R1_noslip_h0.05_noise10.yaml',
+]
+
+path_coa3d = './projects/DA_testbench/input/coa3d/measurements/'
+inputfiles_coa3d = [
+    # 'coa3d_CT_R0.9_slip0.001_trans1000_h0.025_noise0.yaml',
+    # 'coa3d_CT_R0.9_slip0.001_trans1000_h0.025_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_noise0.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.1_DT0.001_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.1_DT0.01_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.025_DT0.01_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.025_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_h0.025_H0.025_DT0.02_noise10.yaml',
+    # 'coa3d_asym_CT_R1_noslip_h0.025_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_asym_CT_R1_noslip_h0.025_H0.2_DT0.02_noise10.yaml',
+    # 'coa3d_bend_CT_R1_noslip_h0.025_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_bend_CT_R1_noslip_h0.025_H0.2_DT0.02_noise10.yaml',
+    # PLUG FLOW
+    # 'coa3d_bend_CT_R1_noslip_plug_h0.025_d0_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_bend_CT_R1_noslip_plug_h0.025_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_bend_CT_R1_noslip_plug_h0.025_H0.2_DT0.02_noise10.yaml',
+    # slices
+    # 'coa3d_CT_R1_noslip_plug_h0.025_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_H0.2_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_slices_isZY_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_slices_Z_P0_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_slices_Z_P0_H0.2_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_slices_isZY_P0_H0.1_DT0.02_noise10.yaml',
+    # 'coa3d_CT_R1_noslip_plug_h0.025_slices_isZY_H0.2_DT0.02_noise10.yaml'
+    # 'coa3d_bend_f0.3_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise48.yaml',
+    # 'coa3d_bend_f0.3_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise0.yaml',
+    # 'coa3d_bend_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise48.yaml',
+    # 'coa3d_bend_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise0.yaml',
+    # 'coa3d_bend_f0.0_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise0.yaml',  # <------ compute these!
+    # 'coa3d_bend_f0.0_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise48.yaml',
+    # 'coa3d_bend_f0.5_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise0.yaml',
+    # 'coa3d_bend_f0.5_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise48.yaml',
+    # 'coa3d_bend_f0.5_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise10.yaml',
+
+    # 'coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noise0.yaml',
+    # 'coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+    # 'coa3d_bend_f0.5_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+    # 'coa3d_bend_f0.6_CT_R1_noslip_plug_h0.025_slices_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+
+    'coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025_slices_par_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+    'coa3d_bend_f0.5_CT_R1_noslip_plug_h0.025_slices_par_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+    'coa3d_bend_f0.6_CT_R1_noslip_plug_h0.025_slices_par_P0_H0.1-0.2_DT0.02_noiseVENC.yaml',
+
+
+]
+
+seed = range(11, 51)
+# seed = 2
+
+path = path_coa3d
+inputfiles = inputfiles_coa3d
+
+#
+if isinstance(seed, range):
+    seed = list(seed)
+elif isinstance(seed, int):
+    seed = [seed]
+
+assert isinstance(seed, list), ('type(seed) must be list, but is {}'.
+                                format(type(seed)))
+
+for inpfile in inputfiles:
+    try:
+        options = inout.read_parameters(path + inpfile)
+    except IOError:
+        raise IOError('File could not be read: {}'.format(path + inpfile))
+
+    generate(options, seed, False)
+
+    copy_inputfile(options, path + inpfile, seed)