NuMRI/kalman/other/coa3d_bend_f0.4_CT_R1_nosli...

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# Set of default parameters for steady Navier-Stokes
mesh: './meshes/coa3d_bend_Lc2_L6.3_f0.4_d0_ns1_h0.025.h5'
density: 1.0
dynamic_viscosity: 0.035
stokes: False
io:
write_hdf5: False
write_hdf5_timeseries: False
write_xdmf: True
write_path: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/'
restart:
path: '' # './projects/nse_coa3d/results/test_restart2/'
time: 0
write_checkpoints: True
write_velocity: 'update'
log: True
boundary_conditions:
- id: 1
preset: 'sine_parabola_inlet'
value:
R: 1.0
U: 43.75
a: 2.5
flow_direction: 0 # (0, 1, 2)
symmetric: False
- id: 2
preset: 'outlet'
value: 0.
- id: 3
type: 'dirichlet'
value: [0, 0, 0]
timemarching:
velocity_pressure_coupling: 'fractionalstep' # monolithic, fractionalstep
monolithic:
timescheme: 'gmp' # generalized midpoint, steady FIXME TODO
theta: 1 # 1: Euler, 2: implicit midpoint rule (one-legged)
nonlinear:
method: 'constant_extrapolation' # constant_extrapolation, linear_extrapolation, newton, picard, snes
maxit: 20
init_steps: 30
use_aitken: 1 # 0: False, 1: Picard only, 2: all
report: 1 # 0: None, 1: residuals, 2: residuals and energy (inflow/driving/forcing via ESSENTIAL Dbcs!)
atol: 1.e-6 # note: dot required!!
rtol: 1.e-16
stol: 0.0
fractionalstep:
scheme: 'CT' # CT, IPCS
coupled_velocity: False
robin_bc_velocity_scheme: 'implicit' # explicit, semi-implicit, implicit
transpiration_bc_projection: 'robin' # robin, dirichlet
flux_report_normalize_boundary: 1
T: 0.4
dt: 0.001
write_dt: 0.001
checkpoint_dt: 0.02 # <= 0: only last; else value + last
report: 1 # 0: print nothing, 1: print time step and writeout, 2: 1 + flux
estimation:
boundary_conditions:
- id: 3
type: 'navierslip'
initial_stddev: 1
- id: 3
type: 'transpiration'
initial_stddev: 1
measurements:
# -
# mesh: './meshes/coa3d_bend_slice_XZ_H0.1.h5'
# fe_degree: 0
# xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_XZ_par_P0_H0.1_DT0.02_noise0/u_meas.xdmf'
# file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_XZ_par_P0_H0.1_DT0.02_noise0/u{i}.h5'
# indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
# noise_stddev: 0 # standard deviation of Gaussian noise
# # noise level 48 ==> 15% of max(u) = 320
# -
# mesh: './meshes/coa3d_bend_slice_XZ_H0.2.h5'
# fe_degree: 0
# xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_XZ_par_P0_H0.2_DT0.02_noise0/u_meas.xdmf'
# file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_XZ_par_P0_H0.2_DT0.02_noise0/u{i}.h5'
# indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
# noise_stddev: 0 # standard deviation of Gaussian noise
# # noise level 48 ==> 15% of max(u) = 320
-
mesh: './meshes/coa3d_bend_slice_inlet_H0.1.h5'
fe_degree: 0
xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inlet_par_P0_H0.1_DT0.02_noiseVENC/u_meas.xdmf'
file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inlet_par_P0_H0.1_DT0.02_noiseVENC/u{i}.h5'
indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
velocity_direction: [1, 0, 0]
noise_stddev: 6.5625 # standard deviation of Gaussian noise
# noise level 48 ==> 15% of max(u) = 320
-
mesh: './meshes/coa3d_bend_slice_inlet_H0.2.h5'
fe_degree: 0
xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inlet_par_P0_H0.2_DT0.02_noiseVENC/u_meas.xdmf'
file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inlet_par_P0_H0.2_DT0.02_noiseVENC/u{i}.h5'
indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
velocity_direction: [1, 0, 0]
noise_stddev: 6.5625 # standard deviation of Gaussian noise
# noise level 48 ==> 15% of max(u) = 320
# -
# mesh: './meshes/coa3d_bend_slice_inclined2_H0.1.h5'
# fe_degree: 0
# xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined2_par_P0_H0.1_DT0.02_noise0/u_meas.xdmf'
# file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined2_par_P0_H0.1_DT0.02_noise0/u{i}.h5'
# indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
# noise_stddev: 0 # standard deviation of Gaussian noise
# # noise level 48 ==> 15% of max(u) = 320
# -
# mesh: './meshes/coa3d_bend_slice_inclined2_H0.2.h5'
# fe_degree: 0
# xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined2_par_P0_H0.2_DT0.02_noise0/u_meas.xdmf'
# file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined2_par_P0_H0.2_DT0.02_noise0/u{i}.h5'
# indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
# noise_stddev: 0 # standard deviation of Gaussian noise
# # noise level 48 ==> 15% of max(u) = 320
-
mesh: './meshes/coa3d_bend_slice_inclined3_H0.1.h5'
fe_degree: 0
xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined3_par_P0_H0.1_DT0.02_noiseVENC/u_meas.xdmf'
file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined3_par_P0_H0.1_DT0.02_noiseVENC/u{i}.h5'
indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
velocity_direction: [0.98426389, 0., -0.17670481]
noise_stddev: 21 # standard deviation of Gaussian noise
# noise level 48 ==> 15% of max(u) = 320
-
mesh: './meshes/coa3d_bend_slice_inclined3_H0.2.h5'
fe_degree: 0
xdmf_file: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined3_par_P0_H0.2_DT0.02_noiseVENC/u_meas.xdmf'
file_root: './projects/DA_testbench/results/coa3d/coa3d_bend_f0.4_CT_R1_noslip_plug_h0.025/measurements/slice_inclined3_par_P0_H0.2_DT0.02_noiseVENC/u{i}.h5'
indices: [1, 20, 40, 60, 80, 100, 120, 140, 160, 180, 200, 220, 240, 260, 280, 300, 320, 340, 360, 380, 400]
velocity_direction: [0.98426389, 0., -0.17670481]
noise_stddev: 21 # standard deviation of Gaussian noise
# noise level 48 ==> 15% of max(u) = 320
roukf:
particles: 'simplex'
observation_operator: 'postprocessing'
reparameterize: True
# solver setup
fem:
velocity_space: p1 # p1 p1b/p1+ p2
pressure_space: p1 # p1 p0/dg0 dg1
strain_symmetric: 0
convection_skew_symmetric: 1 # aka Temam term
stabilization:
backflow_boundaries: [2]
streamline_diffusion:
enabled: True
parameter: 'shakib' # standard, shakib, codina, klr
length_scale: 'metric' # average, max, metric
consistent: False # deprecated
Cinv: ~
monolithic:
infsup: False # pspg, pressure-stabilization
graddiv: False
consistent: False
pressure_stab_constant: 1.
fix_pressure: False
fix_pressure_point: [0., 0.]
linear_solver:
method: 'default'
# inputfile: './projects/nse_coa3d/input/pc/MUMPS_default.yaml'
# inputfile: './input/pc/fgmres_gamg_rtol1e-6.yaml'