Commit Graph

120 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends c2cfc5ef84 fix for `antibiogram()`, transform `WHONET` data set to `sir` 2023-02-22 15:40:05 +01:00
dr. M.S. (Matthijs) Berends dad25302f2 make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
dr. M.S. (Matthijs) Berends 45a9697c84 unit tests 2023-02-12 17:10:48 +01:00
dr. M.S. (Matthijs) Berends c740967cf2 fix for binding rows 2023-02-12 11:20:14 +01:00
dr. M.S. (Matthijs) Berends c51fb24363 pm_bind_rows 2023-02-11 22:28:48 +01:00
dr. M.S. (Matthijs) Berends 2007c3eef3 bind_rows 2023-02-10 17:09:48 +01:00
dr. M.S. (Matthijs) Berends 19fd0ef121 sort sir history 2023-01-23 15:01:21 +01:00
Dr. Matthijs Berends 98e62c9af2
Replace RSI with SIR 2023-01-21 23:47:20 +01:00
dr. M.S. (Matthijs) Berends f619fb683b support new mo codes 2022-12-27 15:16:15 +01:00
dr. M.S. (Matthijs) Berends f6862a139d expert rules 12.0 2022-11-14 15:20:39 +01:00
dr. M.S. (Matthijs) Berends 7ca44fb756 cleanup and new intro logo 2022-11-13 13:44:25 +01:00
Dr. Matthijs Berends 496c08d851
Implement extensive support for antiviral agents support (#77) 2022-11-13 08:46:10 +01:00
dr. M.S. (Matthijs) Berends d20caae54b cleanup 2022-10-31 13:25:41 +01:00
dr. M.S. (Matthijs) Berends 9444ed6d1d fix antibiotics error 2022-10-30 21:05:46 +01:00
dr. M.S. (Matthijs) Berends d40e0ef20b completely updated `antibiotics` 2022-10-30 14:31:45 +01:00
dr. M.S. (Matthijs) Berends 85e2fbe4a3 remove warnings from unit tests 2022-10-19 11:47:57 +02:00
dr. M.S. (Matthijs) Berends 76bcd3528c move object assignment to AMR_env 2022-10-14 13:02:50 +02:00
dr. M.S. (Matthijs) Berends 82e3198315 add `add_custom_antimicrobials()` 2022-10-10 20:20:39 +02:00
dr. M.S. (Matthijs) Berends 4fe90092c7 fix for `NA` in `as.ab()` 2022-10-10 15:44:59 +02:00
Dr. Matthijs Berends cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
dr. M.S. (Matthijs) Berends 2ed5f13880 Fixes #57 2022-08-28 21:13:26 +02:00
dr. M.S. (Matthijs) Berends 4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
dr. M.S. (Matthijs) Berends 303d61b473 new tibble export 2022-08-27 20:49:37 +02:00
dr. M.S. (Matthijs) Berends 952d16de33 new, automated website 2022-08-21 16:37:20 +02:00
dr. M.S. (Matthijs) Berends 3f2f60ab77 language updates 2022-08-19 12:33:14 +02:00
dr. M.S. (Matthijs) Berends 3b2b2be5f8 (v1.8.0.9002) as.rsi() cleanup, more informative warnings 2022-03-02 15:38:55 +01:00
dr. M.S. (Matthijs) Berends f5dcf0ad58 v1.8.0 as accepted by CRAN 2022-01-07 16:27:13 +01:00
dr. M.S. (Matthijs) Berends 25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
dr. M.S. (Matthijs) Berends 75dac113b6 (v1.7.1.9077) skimr support only for newer R versions 2021-12-23 13:38:25 +01:00
dr. M.S. (Matthijs) Berends 578e7dfee9 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
dr. M.S. (Matthijs) Berends 694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
dr. M.S. (Matthijs) Berends 93a4734b44 (v1.7.1.9040) Support for Danish 2021-09-29 12:12:35 +02:00
dr. M.S. (Matthijs) Berends a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
dr. M.S. (Matthijs) Berends ad10693a1a (v1.7.1.9014) rep() for S3 classes 2021-07-06 16:35:14 +02:00
dr. M.S. (Matthijs) Berends 1908e7cc7a (v1.7.1.9000) ab_class update, unit tests 2021-06-04 21:07:55 +02:00
dr. M.S. (Matthijs) Berends ac73a8d849 v1.7.0 2021-05-24 15:29:17 +02:00
dr. M.S. (Matthijs) Berends a13fd98e8b (v1.6.0.9063) prepare new release 2021-05-24 09:00:11 +02:00
dr. M.S. (Matthijs) Berends 29dbfa2f49 (v1.6.0.9021) join functions update 2021-05-12 18:15:03 +02:00
dr. M.S. (Matthijs) Berends 5679ccdaf9 (v1.6.0.9017) extra system codes 2021-05-04 12:47:33 +02:00
dr. M.S. (Matthijs) Berends f33e61bac7 (v1.6.0.9016) website update and c() fixes 2021-05-03 13:06:43 +02:00
dr. M.S. (Matthijs) Berends 12a8d59869 (v1.6.0.9015) italicise_taxonomy 2021-05-03 10:47:32 +02:00
dr. M.S. (Matthijs) Berends 70b803dbb6 (v1.6.0.9008) unlike, bugfix for col_mo naming 2021-04-23 09:59:36 +02:00
dr. M.S. (Matthijs) Berends c6289c3fc3 (v1.6.0.9007) documentation custom eucast rules, progress bar as.mo 2021-04-20 10:46:17 +02:00
dr. M.S. (Matthijs) Berends 6ff5448192 (v1.6.0.9001) support Inf for episodes 2021-04-12 12:35:13 +02:00
dr. M.S. (Matthijs) Berends a7c9b4c295 (v1.5.0.9039) handle first isolates for missing antibiograms 2021-03-08 02:38:32 +01:00
dr. M.S. (Matthijs) Berends 461793dc34 (v1.5.0.9038) quick test 2021-03-08 01:24:37 +01:00
dr. M.S. (Matthijs) Berends 2f0fc3cab7 (v1.5.0.9035) quick test 2021-03-07 22:15:25 +01:00
dr. M.S. (Matthijs) Berends 0d29bde693 (v1.5.0.9030) as.ab() speed improvement 2021-03-05 10:32:09 +01:00
dr. M.S. (Matthijs) Berends 0e0e3c4ffa (v1.5.0.9029) added missing families and orders 2021-03-05 01:31:46 +01:00
dr. M.S. (Matthijs) Berends 8fda473e49 (v1.5.0.9015) unit test fix, grouped first isolates 2021-02-04 16:48:16 +01:00