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AMR
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802 Commits 2 Branches 28 Tags 1.6 GiB
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158 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends c506d2893b as.mo improvements 2019-02-25 15:52:32 +01:00
dr. M.S. (Matthijs) Berends 0ec76cfa98 as.mo improvement 2019-02-25 10:42:57 +01:00
dr. M.S. (Matthijs) Berends e65d1a3036 as.mo improvement 2019-02-23 21:49:02 +01:00
dr. M.S. (Matthijs) Berends f16a152d06 as.mo improvements 2019-02-23 18:08:28 +01:00
dr. M.S. (Matthijs) Berends 1a6314769b as.mo improvement 2019-02-23 16:02:31 +01:00
dr. M.S. (Matthijs) Berends 6c542268be unit tests 2019-02-21 23:32:30 +01:00
dr. M.S. (Matthijs) Berends 68a9a35ed6 algorithm update 2019-02-21 18:55:52 +01:00
dr. M.S. (Matthijs) Berends fb1fc3686c Catalogue of life 2019-02-20 00:04:48 +01:00
dr. M.S. (Matthijs) Berends 54f8258f8c Catalogue of Life, replaces ITIS 2019-02-18 02:33:37 +01:00
dr. M.S. (Matthijs) Berends ed30312048 mo codes for WHONET 2019-02-08 16:06:54 +01:00
dr. M.S. (Matthijs) Berends f4ff98b470 WHO update, antibiotics update 2019-01-25 13:18:41 +01:00
dr. M.S. (Matthijs) Berends 9529d097b6 as.mo 2019-01-21 21:24:40 +01:00
dr. M.S. (Matthijs) Berends 46dcc7e2e8 set_mo_source 2019-01-21 15:53:01 +01:00
dr. M.S. (Matthijs) Berends 3661df7365 direct warning if failing as.mo 2019-01-12 16:45:20 +01:00
dr. M.S. (Matthijs) Berends 5aad26035c edited g.test 2019-01-12 11:06:58 +01:00
dr. M.S. (Matthijs) Berends 193a2d2863 EUCAST update, as.mo bugfix for empty vlaues 2019-01-08 16:23:45 +01:00
dr. M.S. (Matthijs) Berends 0205b6178d guess_mo deprecation 2019-01-06 16:40:55 +01:00
dr. M.S. (Matthijs) Berends 6b2d464f8c big website update, licence txt update 2019-01-02 23:24:07 +01:00
dr. M.S. (Matthijs) Berends 0b8084871d dplyr 0.8.0 support, fixes #7 2018-12-22 22:39:34 +01:00
dr. M.S. (Matthijs) Berends b937662a97 limits for scale_y_percent - Licence update 2018-12-16 22:45:12 +01:00
dr. M.S. (Matthijs) Berends ecebc60bfd C stack error fix 2018-12-14 11:44:15 +01:00
dr. M.S. (Matthijs) Berends 857f565db0 reorganised notes and warnings 2018-12-14 10:52:20 +01:00
dr. M.S. (Matthijs) Berends 01a6d56334 add kingdom to mo_taxonomy 2018-12-10 21:47:25 +01:00
dr. M.S. (Matthijs) Berends 8e8a9cd190 AI improvements 2018-12-07 12:04:55 +01:00
dr. M.S. (Matthijs) Berends 74a7f4453b small CI fix 2018-12-06 16:07:06 +01:00
dr. M.S. (Matthijs) Berends 60fe98bbbd better as.mo handling 2018-12-06 14:36:39 +01:00
dr. M.S. (Matthijs) Berends 31e977937d fix for as.mo and freq 2018-11-30 12:05:59 +01:00
dr. M.S. (Matthijs) Berends 9ddf6dc530 support A. species for as.mo, cleanup 2018-11-24 20:25:09 +01:00
dr. M.S. (Matthijs) Berends fab64e6728 read.4D improvements 2018-11-15 12:42:35 +01:00
dr. M.S. (Matthijs) Berends 6b0f4ffbd4 new kingdom 2018-11-09 13:11:54 +01:00
dr. M.S. (Matthijs) Berends 40a159e78d more unit tests 2018-11-02 10:27:57 +01:00
dr. M.S. (Matthijs) Berends 5476fecc73 eucast update 2018-11-01 20:23:33 +01:00
dr. M.S. (Matthijs) Berends 9cd4ab928a speed improvement as.mo, freq title 2018-10-31 12:10:49 +01:00
dr. M.S. (Matthijs) Berends 1bf8dc2983 as.mo speedup: assigned to namespace 2018-10-29 17:26:17 +01:00
dr. M.S. (Matthijs) Berends 86b03577a7 fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00
dr. M.S. (Matthijs) Berends b464dd524a new verbose 2018-10-19 00:17:03 +02:00
dr. M.S. (Matthijs) Berends 5b5b95a47b count_all and some fixes 2018-10-12 16:35:18 +02:00
dr. M.S. (Matthijs) Berends 67521394f6 more unit tests 2018-10-09 15:41:44 +02:00
dr. M.S. (Matthijs) Berends 95c9fdc552 CRAN fixes for release 0.4.0 
https://cran.r-project.org/web/checks/check_results_AMR.html
 2018-10-09 13:53:33 +02:00
dr. M.S. (Matthijs) Berends 6d761436f7 benchmarks on readme and speed improvement for direct mo codes 2018-10-01 16:26:02 +02:00
dr. M.S. (Matthijs) Berends ed17db0263 renamed year columns to ref 2018-10-01 14:44:40 +02:00
dr. M.S. (Matthijs) Berends 3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
dr. M.S. (Matthijs) Berends 2b0080995e speed improvement for as.mo, more old taxonomic names 2018-09-27 23:23:48 +02:00
dr. M.S. (Matthijs) Berends 450992baea new: 1680 old taxonomic names 2018-09-25 16:44:40 +02:00
dr. M.S. (Matthijs) Berends 9c566585b0 first inclusion of ITIS data 2018-09-24 23:33:29 +02:00
dr. M.S. (Matthijs) Berends b792a2754e added prevalence column and alterted as.mo algorith to use it, added ab_name as alias 2018-09-16 16:43:29 +02:00
dr. M.S. (Matthijs) Berends b0ca49d68d small improvement for is.rsi.eligible, more unit tests 2018-09-14 11:54:01 +02:00
dr. M.S. (Matthijs) Berends cf5711fb0b algorithm improvement 2018-09-14 10:31:21 +02:00
dr. M.S. (Matthijs) Berends cb0d74a4f0 support for French and Italian, added quote to freq 2018-09-10 15:45:25 +02:00
dr. M.S. (Matthijs) Berends b83e6a9380 algoritm improvement, removed all Catabacter except for C. hongkongensis 2018-09-10 11:40:54 +02:00
dr. M.S. (Matthijs) Berends 4816419f0c AI improvements for microorganisms 2018-09-09 12:11:44 +02:00
dr. M.S. (Matthijs) Berends 26f5be0033 support for portuguese, language determination based on system 2018-09-08 16:06:47 +02:00
dr. M.S. (Matthijs) Berends c5073f2fd1 small fix for microorganisms data set 2018-09-06 16:50:03 +02:00
dr. M.S. (Matthijs) Berends de36b0be23 fix for empty values in mo_property 2018-09-05 12:21:27 +02:00
dr. M.S. (Matthijs) Berends e39a9a8b05 added mo_shortname 2018-09-05 10:51:46 +02:00
dr. M.S. (Matthijs) Berends b388e3fee7 Support for German and Spanish microorganism properties, cleanup 2018-09-04 11:33:30 +02:00
dr. M.S. (Matthijs) Berends 75fe4d401f new MOs, cleanup 2018-09-01 21:19:46 +02:00
dr. M.S. (Matthijs) Berends 5965d3c794 replaced bactid by mo 2018-08-31 13:36:19 +02:00