|
|
40d7a971c3
|
(v2.1.1.9236) documentation
|
2025-04-12 11:46:42 +02:00 |
|
|
|
36fd99e1f4
|
(v2.1.1.9235) New website!
|
2025-04-08 15:54:30 +01:00 |
|
|
|
b972bbb96f
|
(v2.1.1.9230) deprecated resistance_predict(), data set folder name without space
|
2025-03-28 16:48:56 +01:00 |
|
|
|
49da312506
|
(v2.1.1.9228) repo cleaning
|
2025-03-28 11:17:49 +01:00 |
|
|
|
969a42cc8c
|
(v2.1.1.9226) update intrinsic_resistant, unit test fixes
|
2025-03-27 15:20:22 +01:00 |
|
|
|
e134e01418
|
(v2.1.1.9198) support eucast expert rules 14 and 13.1
|
2025-03-14 10:10:35 +01:00 |
|
|
|
a7ef22a21e
|
(v2.1.1.9194) new argument for missing R breakpoints - updated from WHONET
|
2025-03-12 16:24:38 +01:00 |
|
|
|
b67613ce08
|
(v2.1.1.9187) WISCA fix
|
2025-03-07 22:27:21 +01:00 |
|
|
|
f7938289eb
|
(v2.1.1.9186) replace antibiotics with antimicrobials!
|
2025-03-07 20:43:26 +01:00 |
|
|
|
07efc292bc
|
(v2.1.1.9163) cleanup
|
2025-02-27 14:04:29 +01:00 |
|
|
|
ac1c40d8bb
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
|
|
|
1ca40e8d67
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
|
|
|
640888f408
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
|
|
|
c67d003e9e
|
(v2.1.1.9060) SDD results now in as.sir()
|
2024-06-19 15:08:23 +02:00 |
|
|
|
a4dc37a4e4
|
(v2.1.1.9057) fix for missing breakpoints
|
2024-06-17 16:52:12 +02:00 |
|
|
|
08a27922a8
|
new SDD and N for as.sir()
|
2024-05-20 15:27:04 +02:00 |
|
|
|
bc4f8515e2
|
new Norwegian link
|
2024-03-03 23:24:57 +01:00 |
|
|
|
7be4dabbc0
|
support veterinary MIC/disk translation
|
2024-02-24 15:16:52 +01:00 |
|
|
|
7cda9e575b
|
prepare for CRAN
|
2023-10-20 14:51:48 +02:00 |
|
|
|
eff164ecb1
|
indicate unique identifiers
|
2023-07-12 21:26:32 +02:00 |
|
|
|
70c601ca11
|
breakpoints UTI interpretation fix
|
2023-07-10 13:41:52 +02:00 |
|
|
|
acb534102b
|
new species groups, updated clinical breakpoints
|
2023-07-08 17:30:05 +02:00 |
|
Dr. Matthijs Berends
|
f065945d7b
|
Update clinical breakpoints and fix some as.mo() bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
|
2023-06-22 15:10:59 +02:00 |
|
|
|
9591688811
|
documentation update
|
2023-05-27 10:39:22 +02:00 |
|
|
|
c6135d2082
|
updated microorganism codes
|
2023-05-26 16:10:01 +02:00 |
|
|
|
91fa73dedf
|
add oxygen tolerance
|
2023-05-11 21:56:27 +02:00 |
|
|
|
ed70f95380
|
Fix clinical breakpoints
|
2023-04-14 23:14:34 +02:00 |
|
|
|
147f9112e9
|
Fix some WHONET codes
|
2023-04-14 11:12:26 +02:00 |
|
|
|
c2cfc5ef84
|
fix for antibiogram(), transform WHONET data set to sir
|
2023-02-22 15:40:05 +01:00 |
|
|
|
bc434db835
|
bring back antibiogram(), without deps
|
2023-02-10 16:18:00 +01:00 |
|
|
|
1a0dc4bf46
|
revert back to pre-antibiogram
|
2023-02-09 13:07:39 +01:00 |
|
|
|
9e99e66f01
|
use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
|
2023-02-06 11:57:22 +01:00 |
|
|
|
19fd0ef121
|
sort sir history
|
2023-01-23 15:01:21 +01:00 |
|
Dr. Matthijs Berends
|
98e62c9af2
|
Replace RSI with SIR
|
2023-01-21 23:47:20 +01:00 |
|
|
|
f619fb683b
|
support new mo codes
|
2022-12-27 15:16:15 +01:00 |
|
|
|
b1b7534c78
|
incorporate Bartlett et al (2022)
|
2022-12-19 15:32:41 +01:00 |
|
|
|
5f3a7694aa
|
microorganisms update, added Salmonella groups
|
2022-12-16 16:10:43 +01:00 |
|
|
|
f6862a139d
|
expert rules 12.0
|
2022-11-14 15:20:39 +01:00 |
|
|
|
7ca44fb756
|
cleanup and new intro logo
|
2022-11-13 13:44:25 +01:00 |
|
Dr. Matthijs Berends
|
496c08d851
|
Implement extensive support for antiviral agents support (#77)
|
2022-11-13 08:46:10 +01:00 |
|
|
|
d40e0ef20b
|
completely updated antibiotics
|
2022-10-30 14:31:45 +01:00 |
|
|
|
6ad7857d39
|
fix missing R breakpoints
|
2022-10-29 14:15:23 +02:00 |
|
|
|
4fe90092c7
|
fix for NA in as.ab()
|
2022-10-10 15:44:59 +02:00 |
|
Dr. Matthijs Berends
|
cd2acc4a29
|
New mo algorithm, prepare for 2.0
|
2022-10-05 09:12:22 +02:00 |
|
|
|
fbd5d32541
|
small fixes
|
2022-08-29 09:35:36 +02:00 |
|
|
|
4d050aef7c
|
styled, unit test fix
|
2022-08-28 10:31:50 +02:00 |
|
|
|
303d61b473
|
new tibble export
|
2022-08-27 20:49:37 +02:00 |
|
|
|
952d16de33
|
new, automated website
|
2022-08-21 16:37:20 +02:00 |
|
|
|
7f981e7778
|
(v1.8.1.9013) add Toxoplasma
|
2022-06-10 13:15:23 +02:00 |
|
|
|
2c5bc73ed6
|
(v1.8.1.9009) random when pkg not loaded
|
2022-05-16 09:29:46 +02:00 |
|
