 dr. M.S. (Matthijs) Berends
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409397a337
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(v0.7.0.9012) unit test
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2019-06-18 19:28:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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9c39c35f86
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(v0.7.0.9010) mo_synonyms, plot/barplot fixes
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2019-06-16 21:42:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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254745061c
|
(v0.7.0.9008) T. vaginalis, rsi_df
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2019-06-13 14:28:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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8f674e19bb
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(v0.7.0.9005) ab algorithm update
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2019-06-11 14:18:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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ec48f1d83b
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(v0.7.0.9003) scale fix
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2019-06-08 23:50:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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f50d3a5ba1
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(v0.7.0.9002) scale fix
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2019-06-08 15:00:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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f02679fb63
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(v0.7.0.9001) new pathovars, small fixes
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2019-06-07 22:47:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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2667fff8a7
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(v0.6.1.9050) support staged install
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2019-06-01 20:40:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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8b5e2b030b
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added boxplot for (grouped) freq()
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2019-05-29 19:56:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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60983a1640
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added mdr_tb()
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2019-05-23 16:58:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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5eda991c47
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ab_info fix
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2019-05-16 22:07:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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0dc0715dc6
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CI tests
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2019-05-13 12:21:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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68cc7ef0d0
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new antibiotics
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2019-05-10 16:44:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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cffb7787d8
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cfta streptococci
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2019-04-09 10:34:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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fbc9191b13
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new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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29f444543d
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added Becker 2019
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2019-03-26 14:24:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6a12266e7
|
DSMZ data
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2019-03-18 14:29:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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fdffc2791b
|
memory for as.mo()
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2019-03-15 13:57:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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74e0ae21fd
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con WHONET, filter ab class
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2019-03-05 22:47:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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2565b60024
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rlang dependency, new fungi
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2019-02-28 13:56:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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642f6571fe
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as.mo fix
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2019-02-27 14:22:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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41ad7a22c8
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mo_rank mo_url, added Tremellales
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2019-02-22 22:12:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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fb1fc3686c
|
Catalogue of life
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2019-02-20 00:04:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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54f8258f8c
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Catalogue of Life, replaces ITIS
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2019-02-18 02:33:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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76ed26d27e
|
resistance predict update
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2019-02-11 10:27:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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1a1e81c5d2
|
as.rsi warning, site update
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2019-02-10 09:13:06 +01:00 |
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dr. M.S. (Matthijs) Berends
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cbad93d92b
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wget dependency
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2019-02-10 08:49:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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ed30312048
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mo codes for WHONET
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2019-02-08 16:06:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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587e00b7be
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is.rsi.eligible update
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2019-02-04 12:24:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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3efb54d016
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freq update
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2019-01-29 20:20:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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f6336fdd89
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quasiquotation for freq()
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2019-01-28 11:20:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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63e343d555
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deps fix
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2019-01-27 20:49:11 +01:00 |
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dr. M.S. (Matthijs) Berends
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18b75356a9
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re-add atc_ddd and atc_groups
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2019-01-27 13:33:43 +01:00 |
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dr. M.S. (Matthijs) Berends
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f836722269
|
atc_ functions
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2019-01-26 23:22:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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46dcc7e2e8
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set_mo_source
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2019-01-21 15:53:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6c3088e9f
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select() fix for freq
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2019-01-17 12:08:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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8db87a15e9
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fixes
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2019-01-15 16:38:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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046d195064
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resistance predict
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2019-01-15 12:45:24 +01:00 |
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dr. M.S. (Matthijs) Berends
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641d866db2
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guess_ab_col, benchmarks
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2019-01-11 20:37:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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80ea555663
|
guess_ab
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2019-01-03 23:56:19 +01:00 |
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dr. M.S. (Matthijs) Berends
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92a32b62a7
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new website, freq updates
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2018-12-29 22:24:19 +01:00 |
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dr. M.S. (Matthijs) Berends
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0b8084871d
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dplyr 0.8.0 support, fixes #7
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2018-12-22 22:39:34 +01:00 |
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dr. M.S. (Matthijs) Berends
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2018d5b477
|
age and age_groups
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2018-12-15 22:40:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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8e8a9cd190
|
AI improvements
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2018-12-07 12:04:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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60fe98bbbd
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better as.mo handling
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2018-12-06 14:36:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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4fcc2b409a
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MDRO update
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2018-11-16 20:50:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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fab64e6728
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read.4D improvements
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2018-11-15 12:42:35 +01:00 |
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dr. M.S. (Matthijs) Berends
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6b0f4ffbd4
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new kingdom
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2018-11-09 13:11:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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9be5e0318b
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freq: fix na.rm in groups
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2018-11-08 16:10:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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84e08f516a
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grouping var for freq
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2018-11-06 16:41:59 +01:00 |
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dr. M.S. (Matthijs) Berends
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d15bb2ab3f
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read_4D
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2018-11-05 15:30:49 +01:00 |
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dr. M.S. (Matthijs) Berends
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d07e9b904e
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new function get_locale
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2018-11-05 13:20:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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5476fecc73
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eucast update
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2018-11-01 20:23:33 +01:00 |
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dr. M.S. (Matthijs) Berends
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86b03577a7
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fix for as.mo, added also_single_tested
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2018-10-19 13:53:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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0ef91be3ac
|
param rules for EUCAST
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2018-10-18 12:10:10 +02:00 |
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dr. M.S. (Matthijs) Berends
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693f64bdbf
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new EUCAST rules: clinical breakpoints
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2018-10-17 17:32:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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5b5b95a47b
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count_all and some fixes
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2018-10-12 16:35:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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95c9fdc552
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CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
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2018-10-09 13:53:33 +02:00 |
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dr. M.S. (Matthijs) Berends
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ed17db0263
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renamed year columns to ref
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2018-10-01 14:44:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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3119a221e5
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authors from ITIS, diff for freq
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2018-10-01 11:39:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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92c9cc2608
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diff for freq, fix for mo_shortname
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2018-09-29 21:54:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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768fe17324
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removed clipboard functions as it violated CRAN policies
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2018-09-28 16:05:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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9c566585b0
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first inclusion of ITIS data
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2018-09-24 23:33:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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5d80cef338
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added taxonomic data from ITIS
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2018-09-17 20:53:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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db14781593
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add labels_rsi_count
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2018-09-16 22:11:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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b792a2754e
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added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
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2018-09-16 16:43:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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e39a9a8b05
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added mo_shortname
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2018-09-05 10:51:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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b388e3fee7
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Support for German and Spanish microorganism properties, cleanup
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2018-09-04 11:33:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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5965d3c794
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replaced bactid by mo
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2018-08-31 13:36:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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029157b3be
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163 new trade names, added ab_tradenames
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2018-08-29 12:27:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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972fc4f6c7
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ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid
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2018-08-28 13:51:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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2acdb1981c
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atc and bactid functions, readme update
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2018-08-25 22:01:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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a100d07da6
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removed ratio, better rsi_calc, update for freq
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2018-08-24 11:08:20 +02:00 |
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dr. M.S. (Matthijs) Berends
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da5379c881
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quasiquotation, alpha for geom_rsi
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2018-08-23 00:40:36 +02:00 |
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dr. M.S. (Matthijs) Berends
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3e87c8f409
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count_* functions
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2018-08-22 00:02:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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ce2cdb9309
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support groups for portion_df, update README
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2018-08-12 22:34:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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1ba7d883fe
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new ggplot enhancement
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2018-08-11 21:30:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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53fa198e35
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new portion functions
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2018-08-10 15:01:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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ae2433a020
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rsi family for resistance analysis
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2018-08-03 14:49:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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826694323b
|
new functions R, RI, SI, S
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2018-07-29 22:14:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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feab1cad6b
|
small fixes
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2018-07-28 09:34:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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498e88b5cf
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improvement for forecasting resistance
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2018-07-26 16:30:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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d9e204031d
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update to septic_patients, speed improvements
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2018-07-25 14:17:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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8421638b60
|
new class bactid
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2018-07-23 14:14:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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5cb9c541f8
|
new algorithm key abs
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2018-07-17 13:02:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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a5a4354651
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speed improvements
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2018-07-17 10:32:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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715a7630ca
|
support format.freq
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2018-07-16 16:41:48 +02:00 |
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dr. M.S. (Matthijs) Berends
|
b6655f6454
|
Welcome C++!
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2018-07-13 17:23:46 +02:00 |
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dr. M.S. (Matthijs) Berends
|
a28289562a
|
remove print function, out of scope
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2018-07-11 20:12:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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f63414d519
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new g.test, extra unit tests
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2018-07-10 12:27:07 +02:00 |
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dr. M.S. (Matthijs) Berends
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fc30d3fb13
|
freq: support for table
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2018-07-09 14:02:58 +02:00 |
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dr. M.S. (Matthijs) Berends
|
14b990d769
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kurtosis, skewness, start with ML
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2018-07-08 22:14:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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34ee0247ac
|
addins and small improvements to microorganisms dataset
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2018-07-04 17:20:03 +02:00 |
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dr. M.S. (Matthijs) Berends
|
10fce8382c
|
include IQR and MAD in freq
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2018-07-03 11:30:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3d0d21f322
|
rename vector2ratio to ratio
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2018-07-02 11:14:20 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2c8d4cb8bf
|
forgot namespace...
|
2018-07-01 22:37:47 +02:00 |
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dr. M.S. (Matthijs) Berends
|
3527894b49
|
new g.test() and edited freq()
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2018-07-01 21:40:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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649a8025aa
|
add clipboard functions again
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2018-06-27 15:54:56 +02:00 |
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dr. M.S. (Matthijs) Berends
|
a9bd5472d0
|
top_freq
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2018-06-20 14:47:37 +02:00 |
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dr. M.S. (Matthijs) Berends
|
bdc860e29c
|
atc_groups
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2018-06-19 10:05:38 +02:00 |