 dr. M.S. (Matthijs) Berends
|
3d9faf89cf
|
ATC and DDD update
|
2022-10-29 19:01:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
fa620f8ebd
|
fix export of lists in `antibiotics` and `antivirals`
|
2022-10-29 16:17:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
afdc48db1e
|
fix txt export of microorganisms
|
2022-10-29 16:08:18 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6ad7857d39
|
fix missing R breakpoints
|
2022-10-29 14:15:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c2801ba7a1
|
new rsi_translation
|
2022-10-22 22:00:15 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d10651eb26
|
cleanup
|
2022-10-22 10:20:09 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d0b54f640c
|
Update contributors list
|
2022-10-21 21:56:54 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bfca21bd3f
|
precommit update
|
2022-10-21 19:31:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
faca6d608a
|
mean AMR distance
|
2022-10-21 16:02:14 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
178ab5e5ff
|
mean AMR distance
|
2022-10-21 15:59:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4bebba3610
|
fix for scoped dplyr verbs
|
2022-10-21 15:13:19 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
aa2c0639d0
|
add confidence intervals (fixed #70), remove `combine_IR`
|
2022-10-20 16:08:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
85e2fbe4a3
|
remove warnings from unit tests
|
2022-10-19 11:47:57 +02:00 |
Dr. Matthijs Berends
|
fed3b6440f
|
Unit test fix
|
2022-10-19 08:14:38 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f203928f7e
|
coercion fixes
|
2022-10-19 06:59:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3fc39198d0
|
unit test fix
|
2022-10-18 23:03:16 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e5e6d2200d
|
fix add manual ab
|
2022-10-18 22:53:38 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ad68b50ecd
|
custom ab fix
|
2022-10-15 15:20:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
76bcd3528c
|
move object assignment to AMR_env
|
2022-10-14 13:02:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
dfae4c7e7d
|
fast-forward from pull
Merge branch 'main' of https://github.com/msberends/AMR into main
# Conflicts:
# DESCRIPTION
# R/add_custom_antimicrobials.R
|
2022-10-11 10:53:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
33227a5d90
|
support ab selectors for manual AB codes
|
2022-10-11 10:49:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
57d66cd9d0
|
doc fix
|
2022-10-10 21:38:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
955f9d7020
|
documentation fix
|
2022-10-10 21:03:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3deeedc4b6
|
website fix
|
2022-10-10 20:21:41 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
82e3198315
|
add `add_custom_antimicrobials()`
|
2022-10-10 20:20:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4fe90092c7
|
fix for `NA` in `as.ab()`
|
2022-10-10 15:44:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
43c638d122
|
add `mo_current()`
|
2022-10-10 10:12:08 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b753b84128
|
fix for mo type translation
|
2022-10-06 12:11:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
b9342d103e
|
fix documentation
|
2022-10-06 11:33:30 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
369e7545da
|
and yet another website fix
|
2022-10-05 10:17:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bc44da0e38
|
website fix
|
2022-10-05 10:07:27 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
def9fc0d75
|
fix website
|
2022-10-05 09:33:21 +02:00 |
|
Dr. Matthijs Berends
|
cd2acc4a29
|
New mo algorithm, prepare for 2.0
|
2022-10-05 09:12:22 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
63fe160322
|
new rsi_interpretation_history
|
2022-09-01 15:20:57 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3fca703fbf
|
new AMR distance function
|
2022-08-30 21:48:02 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
fbd5d32541
|
small fixes
|
2022-08-29 09:35:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e7af5fc716
|
fix AMR vignette
|
2022-08-28 22:38:08 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2ed5f13880
|
Fixes #57
|
2022-08-28 21:13:26 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1e4eaf23f2
|
unit tests
|
2022-08-28 20:49:04 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
21b4552f5a
|
unit test fix
|
2022-08-28 20:10:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c44ddf272f
|
fix for R <= 3.3
|
2022-08-28 19:34:04 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
71db246d5c
|
unit test fix
|
2022-08-28 19:17:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f781998904
|
amoxicillin interpretation fix
|
2022-08-28 11:17:53 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4d050aef7c
|
styled, unit test fix
|
2022-08-28 10:31:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4cb1db4554
|
data export
|
2022-08-27 20:51:26 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
303d61b473
|
new tibble export
|
2022-08-27 20:49:37 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
164886f50b
|
new workflow files
|
2022-08-26 23:25:37 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3cef2ea286
|
restore LFS
|
2022-08-26 23:21:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3864ab2fb8
|
Feather and Parquet files
|
2022-08-26 22:25:15 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4da32e3d40
|
set up Git LFS for large files
|
2022-08-26 14:02:08 +02:00 |