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fbc9191b13
|
new EUCAST rules algorithm
|
2019-04-05 18:47:39 +02:00 |
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b25f2d6213
|
v0.6.1
|
2019-03-28 21:33:28 +01:00 |
|
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|
29f444543d
|
added Becker 2019
|
2019-03-26 14:24:03 +01:00 |
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c6a12266e7
|
DSMZ data
|
2019-03-18 14:29:41 +01:00 |
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|
|
e18a1f1f17
|
as.mo improvement
|
2019-03-15 17:36:42 +01:00 |
|
|
|
fdffc2791b
|
memory for as.mo()
|
2019-03-15 13:57:25 +01:00 |
|
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|
504a042fba
|
uncertainty levels, new WHONET codes
|
2019-03-12 12:19:27 +01:00 |
|
|
|
b319b89750
|
WHONET fix
|
2019-03-09 08:21:00 +01:00 |
|
|
|
0c0c6e289b
|
small as.mo fix
|
2019-03-06 14:39:02 +01:00 |
|
|
|
74e0ae21fd
|
con WHONET, filter ab class
|
2019-03-05 22:47:42 +01:00 |
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|
e835525cf6
|
unknown codes, rsi fix
|
2019-03-02 22:47:04 +01:00 |
|
|
|
c5efb272fd
|
mo_source improvement
|
2019-03-01 09:34:04 +01:00 |
|
|
|
2565b60024
|
rlang dependency, new fungi
|
2019-02-28 13:56:28 +01:00 |
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|
|
cf3bdb54c7
|
global var fix
|
2019-02-27 19:02:47 +01:00 |
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|
|
642f6571fe
|
as.mo fix
|
2019-02-27 14:22:07 +01:00 |
|
|
|
54162522bd
|
age_groups fix
|
2019-02-27 11:36:12 +01:00 |
|
|
|
f9ded23023
|
as.mo improvement
|
2019-02-26 12:33:26 +01:00 |
|
|
|
f25a4b3679
|
as.mo improvements
|
2019-02-25 16:07:21 +01:00 |
|
|
|
c506d2893b
|
as.mo improvements
|
2019-02-25 15:52:32 +01:00 |
|
|
|
0ec76cfa98
|
as.mo improvement
|
2019-02-25 10:42:57 +01:00 |
|
|
|
e65d1a3036
|
as.mo improvement
|
2019-02-23 21:49:02 +01:00 |
|
|
|
f16a152d06
|
as.mo improvements
|
2019-02-23 18:08:28 +01:00 |
|
|
|
1a6314769b
|
as.mo improvement
|
2019-02-23 16:02:31 +01:00 |
|
|
|
6c542268be
|
unit tests
|
2019-02-21 23:32:30 +01:00 |
|
|
|
68a9a35ed6
|
algorithm update
|
2019-02-21 18:55:52 +01:00 |
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|
|
fb1fc3686c
|
Catalogue of life
|
2019-02-20 00:04:48 +01:00 |
|
|
|
54f8258f8c
|
Catalogue of Life, replaces ITIS
|
2019-02-18 02:33:37 +01:00 |
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|
|
ed30312048
|
mo codes for WHONET
|
2019-02-08 16:06:54 +01:00 |
|
|
|
f4ff98b470
|
WHO update, antibiotics update
|
2019-01-25 13:18:41 +01:00 |
|
|
|
9529d097b6
|
as.mo
|
2019-01-21 21:24:40 +01:00 |
|
|
|
46dcc7e2e8
|
set_mo_source
|
2019-01-21 15:53:01 +01:00 |
|
|
|
3661df7365
|
direct warning if failing as.mo
|
2019-01-12 16:45:20 +01:00 |
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|
|
5aad26035c
|
edited g.test
|
2019-01-12 11:06:58 +01:00 |
|
|
|
193a2d2863
|
EUCAST update, as.mo bugfix for empty vlaues
|
2019-01-08 16:23:45 +01:00 |
|
|
|
0205b6178d
|
guess_mo deprecation
|
2019-01-06 16:40:55 +01:00 |
|
|
|
6b2d464f8c
|
big website update, licence txt update
|
2019-01-02 23:24:07 +01:00 |
|
|
|
0b8084871d
|
dplyr 0.8.0 support, fixes #7
|
2018-12-22 22:39:34 +01:00 |
|
|
|
b937662a97
|
limits for scale_y_percent - Licence update
|
2018-12-16 22:45:12 +01:00 |
|
|
|
ecebc60bfd
|
C stack error fix
|
2018-12-14 11:44:15 +01:00 |
|
|
|
857f565db0
|
reorganised notes and warnings
|
2018-12-14 10:52:20 +01:00 |
|
|
|
01a6d56334
|
add kingdom to mo_taxonomy
|
2018-12-10 21:47:25 +01:00 |
|
|
|
8e8a9cd190
|
AI improvements
|
2018-12-07 12:04:55 +01:00 |
|
|
|
74a7f4453b
|
small CI fix
|
2018-12-06 16:07:06 +01:00 |
|
|
|
60fe98bbbd
|
better as.mo handling
|
2018-12-06 14:36:39 +01:00 |
|
|
|
31e977937d
|
fix for as.mo and freq
|
2018-11-30 12:05:59 +01:00 |
|
|
|
9ddf6dc530
|
support A. species for as.mo, cleanup
|
2018-11-24 20:25:09 +01:00 |
|
|
|
fab64e6728
|
read.4D improvements
|
2018-11-15 12:42:35 +01:00 |
|
|
|
6b0f4ffbd4
|
new kingdom
|
2018-11-09 13:11:54 +01:00 |
|
|
|
40a159e78d
|
more unit tests
|
2018-11-02 10:27:57 +01:00 |
|
|
|
5476fecc73
|
eucast update
|
2018-11-01 20:23:33 +01:00 |
|
|
|
9cd4ab928a
|
speed improvement as.mo, freq title
|
2018-10-31 12:10:49 +01:00 |
|
|
|
1bf8dc2983
|
as.mo speedup: assigned to namespace
|
2018-10-29 17:26:17 +01:00 |
|
|
|
86b03577a7
|
fix for as.mo, added also_single_tested
|
2018-10-19 13:53:31 +02:00 |
|
|
|
b464dd524a
|
new verbose
|
2018-10-19 00:17:03 +02:00 |
|
|
|
5b5b95a47b
|
count_all and some fixes
|
2018-10-12 16:35:18 +02:00 |
|
|
|
67521394f6
|
more unit tests
|
2018-10-09 15:41:44 +02:00 |
|
|
|
95c9fdc552
|
CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
|
2018-10-09 13:53:33 +02:00 |
|
|
|
6d761436f7
|
benchmarks on readme and speed improvement for direct mo codes
|
2018-10-01 16:26:02 +02:00 |
|
|
|
ed17db0263
|
renamed year columns to ref
|
2018-10-01 14:44:40 +02:00 |
|
|
|
3119a221e5
|
authors from ITIS, diff for freq
|
2018-10-01 11:39:43 +02:00 |
|
|
|
2b0080995e
|
speed improvement for as.mo, more old taxonomic names
|
2018-09-27 23:23:48 +02:00 |
|
|
|
450992baea
|
new: 1680 old taxonomic names
|
2018-09-25 16:44:40 +02:00 |
|
|
|
9c566585b0
|
first inclusion of ITIS data
|
2018-09-24 23:33:29 +02:00 |
|
|
|
b792a2754e
|
added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
|
2018-09-16 16:43:29 +02:00 |
|
|
|
b0ca49d68d
|
small improvement for is.rsi.eligible, more unit tests
|
2018-09-14 11:54:01 +02:00 |
|
|
|
cf5711fb0b
|
algorithm improvement
|
2018-09-14 10:31:21 +02:00 |
|
|
|
cb0d74a4f0
|
support for French and Italian, added quote to freq
|
2018-09-10 15:45:25 +02:00 |
|
|
|
b83e6a9380
|
algoritm improvement, removed all Catabacter except for C. hongkongensis
|
2018-09-10 11:40:54 +02:00 |
|
|
|
4816419f0c
|
AI improvements for microorganisms
|
2018-09-09 12:11:44 +02:00 |
|
|
|
26f5be0033
|
support for portuguese, language determination based on system
|
2018-09-08 16:06:47 +02:00 |
|
|
|
c5073f2fd1
|
small fix for microorganisms data set
|
2018-09-06 16:50:03 +02:00 |
|
|
|
de36b0be23
|
fix for empty values in mo_property
|
2018-09-05 12:21:27 +02:00 |
|
|
|
e39a9a8b05
|
added mo_shortname
|
2018-09-05 10:51:46 +02:00 |
|
|
|
b388e3fee7
|
Support for German and Spanish microorganism properties, cleanup
|
2018-09-04 11:33:30 +02:00 |
|
|
|
75fe4d401f
|
new MOs, cleanup
|
2018-09-01 21:19:46 +02:00 |
|
|
|
5965d3c794
|
replaced bactid by mo
|
2018-08-31 13:36:19 +02:00 |
|
