dr. M.S. (Matthijs) Berends
c7af397edf
(v2.1.1.9189) Add the awesome Aislinn Cook
2025-03-07 23:25:50 +01:00
dr. M.S. (Matthijs) Berends
b67613ce08
(v2.1.1.9187) WISCA fix
2025-03-07 22:27:21 +01:00
dr. M.S. (Matthijs) Berends
f7938289eb
(v2.1.1.9186) replace antibiotics with antimicrobials!
2025-03-07 20:43:26 +01:00
dr. M.S. (Matthijs) Berends
07efc292bc
(v2.1.1.9163) cleanup
2025-02-27 14:04:29 +01:00
dr. M.S. (Matthijs) Berends
22e66741cc
(v2.1.1.9160) cleanup
2025-02-26 20:28:33 +01:00
dr. M.S. (Matthijs) Berends
0c3ea4b538
(v2.1.1.9159) new approach as.ab()
2025-02-26 19:23:54 +01:00
dr. M.S. (Matthijs) Berends
195dfb4b91
(v2.1.1.9157) improved as.ab(), fixed knit_print of antibiogram
2025-02-26 13:27:20 +01:00
dr. M.S. (Matthijs) Berends
aa8f6af185
(v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro
2025-02-23 11:18:08 +01:00
dr. M.S. (Matthijs) Berends
226d10f546
(v2.1.1.9154) documentation fix
2025-02-22 22:07:56 +01:00
dr. M.S. (Matthijs) Berends
abb5602532
(v2.1.1.9153) mic plot fix
2025-02-22 21:26:38 +01:00
dr. M.S. (Matthijs) Berends
ef02f4a7f2
(v2.1.1.9151) update readme
2025-02-15 20:53:12 +01:00
dr. M.S. (Matthijs) Berends
9650545d6e
(v2.1.1.9150) unit tests
2025-02-15 13:40:51 +01:00
dr. M.S. (Matthijs) Berends
883fbe7cfe
(v2.1.1.9149) doc fix
2025-02-15 12:46:48 +01:00
dr. M.S. (Matthijs) Berends
d94efb0f5e
(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
2025-02-14 14:16:46 +01:00
dr. M.S. (Matthijs) Berends
bd2887bcd4
(v2.1.1.9146) new scale_*_sir() functions
2025-02-13 19:47:57 +01:00
Matthijs Berends
5ff9210c12
Update plot.Rd
2025-02-11 17:23:34 +01:00
dr. M.S. (Matthijs) Berends
07757c933c
(v2.1.1.9144) new MIC scales and fix for rescale_mic()
2025-02-11 08:48:37 +01:00
dr. M.S. (Matthijs) Berends
2171f05951
(v2.1.1.9143) unit tests
2025-02-07 19:18:55 +01:00
dr. M.S. (Matthijs) Berends
8ba2e4ed94
(v2.1.1.9141) new AMR selectors, eucast overwrite arg
2025-02-07 18:01:22 +01:00
dr. M.S. (Matthijs) Berends
baea4323c7
(v2.1.1.9140) WISCA fix
2025-02-05 20:48:35 +01:00
dr. M.S. (Matthijs) Berends
700522b466
(v2.1.1.9135) documentation fix
2025-01-28 15:16:55 +01:00
dr. M.S. (Matthijs) Berends
e740aa691b
(v2.1.1.9134) add Gamma to WISCA documentation
2025-01-27 23:11:10 +01:00
dr. M.S. (Matthijs) Berends
2561494e06
(v2.1.1.9133) update math formulae
2025-01-27 22:43:35 +01:00
dr. M.S. (Matthijs) Berends
1149360b27
(v2.1.1.9129) unit test fix
2025-01-27 16:17:03 +01:00
dr. M.S. (Matthijs) Berends
7accf6ff13
(v2.1.1.9127) unit tests
2025-01-27 10:46:43 +01:00
dr. M.S. (Matthijs) Berends
66833b4f5a
(v2.1.1.9126) implemented WISCA! Also added top_n_microorganisms() and fixed Python wrapper
2025-01-26 23:01:17 +01:00
dr. M.S. (Matthijs) Berends
92c4fc0f94
(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
2025-01-17 12:09:39 +01:00
dr. M.S. (Matthijs) Berends
08ddbaa930
(v2.1.1.9123) add EFF code to antibiotics data set
2025-01-15 16:14:09 +01:00
dr. M.S. (Matthijs) Berends
2e31ec19c3
(v2.1.1.9122) fix documentation
2024-12-20 10:52:44 +01:00
dr. M.S. (Matthijs) Berends
15fc72fc66
(v2.1.1.9121) support tidymodels
2024-12-19 20:17:15 +01:00
dr. M.S. (Matthijs) Berends
7e7db6bb81
support for Dutch national MDR guideline
2024-12-15 20:15:52 +01:00
dr. M.S. (Matthijs) Berends
d7de1bc33d
(v2.1.1.9118) move ggplot2 plotting functions to general 'plotting' man page
2024-12-14 19:41:15 +01:00
dr. M.S. (Matthijs) Berends
175a6777f3
(v2.1.1.9116) selectors as separate functions
2024-12-13 09:44:54 +01:00
dr. M.S. (Matthijs) Berends
419cb5b9c4
(v2.1.1.9112) unit test
2024-12-06 18:01:54 +01:00
dr. M.S. (Matthijs) Berends
0488d00f20
(v2.1.1.9111) add betalactams_with_inhibitor(), fixes #175
2024-12-06 15:44:20 +01:00
dr. M.S. (Matthijs) Berends
5c4d8fcd2a
(v2.1.1.9095) Python support
2024-10-15 17:12:55 +02:00
dr. M.S. (Matthijs) Berends
50a9f8f0e0
(v2.1.1.9086) website update
2024-10-02 10:20:05 +02:00
dr. M.S. (Matthijs) Berends
681fe011fe
(v2.1.1.9082) algorithm updates
2024-09-30 18:46:55 +02:00
dr. M.S. (Matthijs) Berends
ac1c40d8bb
(v2.1.1.9081) HUGE microorganisms update for fungi!
2024-09-29 22:17:56 +02:00
dr. M.S. (Matthijs) Berends
a558f4c121
(v2.1.1.9080) fix rescale_mic() for an outside MIC range
2024-09-24 22:39:40 +02:00
dr. M.S. (Matthijs) Berends
1ca40e8d67
(v2.1.1.9079) fix for uti in as.sir()
2024-09-24 15:34:12 +02:00
dr. M.S. (Matthijs) Berends
127892430d
(v2.1.1.9078) 12 new formatting formats for antibiogram(), prepare for Bayesian WISCA
2024-09-22 11:45:51 +02:00
dr. M.S. (Matthijs) Berends
ef8ef28650
(v2.1.1.9072)
2024-09-19 11:46:17 +02:00
dr. M.S. (Matthijs) Berends
ddb23b6e73
(v2.1.1.9071) update veterinary SIR interpretation, add only_fungi
2024-09-19 11:44:56 +02:00
dr. M.S. (Matthijs) Berends
83907c9c65
add files (no-verify)
2024-07-17 14:31:09 +02:00
dr. M.S. (Matthijs) Berends
ff03bb6471
(v2.1.1.9065) unit tests 2
2024-07-16 15:58:18 +02:00
dr. M.S. (Matthijs) Berends
640888f408
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends
c67d003e9e
(v2.1.1.9060) SDD results now in as.sir()
2024-06-19 15:08:23 +02:00
dr. M.S. (Matthijs) Berends
0c3d81f32e
(v2.1.1.9059) documentation fix
2024-06-17 22:26:05 +02:00
dr. M.S. (Matthijs) Berends
a4dc37a4e4
(v2.1.1.9057) fix for missing breakpoints
2024-06-17 16:52:12 +02:00
