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Commit Graph

26 Commits

Author SHA1 Message Date
ed17db0263 renamed year columns to ref 2018-10-01 14:44:40 +02:00
3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
2b0080995e speed improvement for as.mo, more old taxonomic names 2018-09-27 23:23:48 +02:00
9c566585b0 first inclusion of ITIS data 2018-09-24 23:33:29 +02:00
db14781593 add labels_rsi_count 2018-09-16 22:11:17 +02:00
b792a2754e added prevalence column and alterted as.mo algorith to use it, added ab_name as alias 2018-09-16 16:43:29 +02:00
75fe4d401f new MOs, cleanup 2018-09-01 21:19:46 +02:00
2acdb1981c atc and bactid functions, readme update 2018-08-25 22:01:14 +02:00
3e87c8f409 count_* functions 2018-08-22 00:02:26 +02:00
1ba7d883fe new ggplot enhancement 2018-08-11 21:30:00 +02:00
feab1cad6b small fixes 2018-07-28 09:34:03 +02:00
498e88b5cf improvement for forecasting resistance 2018-07-26 16:30:42 +02:00
6eaf33baf3 speed improvements 2018-07-15 22:56:41 +02:00
e3e10c2e88 fix for macOS and older tidyr versions 2018-07-11 12:34:02 +02:00
f63414d519 new g.test, extra unit tests 2018-07-10 12:27:07 +02:00
fc30d3fb13 freq: support for table 2018-07-09 14:02:58 +02:00
14b990d769 kurtosis, skewness, start with ML 2018-07-08 22:14:55 +02:00
34ee0247ac addins and small improvements to microorganisms dataset 2018-07-04 17:20:03 +02:00
3527894b49 new g.test() and edited freq() 2018-07-01 21:40:37 +02:00
a9bd5472d0 top_freq 2018-06-20 14:47:37 +02:00
uscloud
dcc26dd942 Update freq function 2018-05-22 16:34:22 +02:00
970e3ed7f1 EUCAST rules for MDRO 2018-04-25 15:33:58 +02:00
2509e2413d MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00
fe803f7279
use guess_bactid for GLIMS codes 2018-03-19 21:23:21 +01:00
502a44eb25
- Added new function guess_bactid to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
2018-03-19 12:43:22 +01:00
62304dc23f
first commit 2018-02-21 11:52:31 +01:00