dr. M.S. (Matthijs) Berends
641b88c814
website update
2022-03-27 09:37:55 +02:00
dr. M.S. (Matthijs) Berends
0fb9a1b194
prerelease 1.8.1
2022-03-14 16:43:15 +01:00
dr. M.S. (Matthijs) Berends
45e9546538
prerelease 1.8.1
...
Merge branch 'development' of https://github.com/msberends/AMR into development
# Conflicts:
# docs/articles/AMR.html
# docs/articles/AMR_files/figure-html/disk_plots-1.png
# docs/articles/AMR_files/figure-html/disk_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots-1.png
# docs/articles/AMR_files/figure-html/mic_plots-2.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-2.png
# docs/articles/AMR_files/figure-html/plot 1-1.png
# docs/articles/AMR_files/figure-html/plot 3-1.png
# docs/articles/AMR_files/figure-html/plot 4-1.png
# docs/articles/AMR_files/figure-html/plot 5-1.png
# docs/articles/EUCAST.html
# docs/articles/MDR.html
# docs/articles/PCA.html
# docs/articles/PCA_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/PCA_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/SPSS.html
# docs/articles/WHONET.html
# docs/articles/WHONET_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/benchmarks.html
# docs/articles/benchmarks_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/datasets.html
# docs/articles/resistance_predict.html
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-2.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/welcome_to_AMR.html
# docs/news/index.html
# docs/pkgdown.yml
# docs/reference/AMR-deprecated.html
# docs/reference/AMR.html
# docs/reference/WHOCC.html
# docs/reference/WHONET.html
# docs/reference/antibiotics.html
# docs/reference/catalogue_of_life.html
# docs/reference/catalogue_of_life_version.html
# docs/reference/dosage.html
# docs/reference/example_isolates.html
# docs/reference/example_isolates_unclean.html
# docs/reference/g.test.html
# docs/reference/intrinsic_resistant.html
# docs/reference/microorganisms.codes.html
# docs/reference/microorganisms.html
# docs/reference/microorganisms.old.html
# docs/reference/rsi_translation.html
2022-03-14 16:37:37 +01:00
dr. M.S. (Matthijs) Berends
1b0983e382
(v1.8.1) prerelease 1.8.1
2022-03-14 16:36:10 +01:00
dr. M.S. (Matthijs) Berends
8c9feea087
website update
2022-03-12 19:53:29 +01:00
dr. M.S. (Matthijs) Berends
08d387b5ce
(v1.8.0.9005) as.rsi() fix
2022-03-10 19:33:25 +01:00
dr. M.S. (Matthijs) Berends
ad82bb4ce0
(v1.8.0.9004) MIC printing in tibbles
2022-03-03 21:11:02 +01:00
dr. M.S. (Matthijs) Berends
18e8525d10
(v1.8.0.9001) as.mo improvement, fixes #52
2022-02-26 21:58:23 +01:00
dr. M.S. (Matthijs) Berends
25cef46c59
(v1.8.0) prerelease 1.8.0
2021-12-23 18:56:28 +01:00
dr. M.S. (Matthijs) Berends
1e66a3daf3
(v1.7.1.9068) new logo, unit tests
2021-12-12 11:07:02 +01:00
dr. M.S. (Matthijs) Berends
e63defe324
(v1.7.1.9062) website update
2021-12-06 11:12:30 +01:00
dr. M.S. (Matthijs) Berends
7965468ccd
(v1.7.1.9058) vars selection for set_ab_names()
2021-12-05 22:06:45 +01:00
dr. M.S. (Matthijs) Berends
37e6e35ec4
(v1.7.1.9051) updated taxonomy, updated git branch name
2021-10-06 13:23:57 +02:00
dr. M.S. (Matthijs) Berends
93a4734b44
(v1.7.1.9040) Support for Danish
2021-09-29 12:12:35 +02:00
dr. M.S. (Matthijs) Berends
d6a916d70b
(v1.7.1.9030) unit test
2021-08-29 23:50:45 +02:00
dr. M.S. (Matthijs) Berends
a44283f998
(v1.7.1.9024) unit tests
2021-08-17 14:34:11 +02:00
dr. M.S. (Matthijs) Berends
a2d249962f
(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
2021-08-16 21:54:34 +02:00
dr. M.S. (Matthijs) Berends
4e1efd902c
(v1.7.1.9022) rely on vctrs for ab selectors
2021-07-23 21:42:11 +02:00
dr. M.S. (Matthijs) Berends
0ec81cc12e
(v1.7.1.9021) autoplot generics
2021-07-12 22:12:28 +02:00
dr. M.S. (Matthijs) Berends
6838f03bde
(v1.7.1.9020) autoplot generics
2021-07-12 20:24:49 +02:00
dr. M.S. (Matthijs) Berends
d04e83f494
(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
2021-06-22 12:16:42 +02:00
dr. M.S. (Matthijs) Berends
99be4c7e7e
(v1.7.1.9002) ab class selectors update
2021-06-14 22:04:04 +02:00
dr. M.S. (Matthijs) Berends
7e70403efb
(v1.7.1) New CRAN release
2021-06-03 15:19:21 +02:00
dr. M.S. (Matthijs) Berends
bef0f42f66
(v1.7.0.9001) CLSI 2020 guideline
2021-06-01 15:33:06 +02:00
dr. M.S. (Matthijs) Berends
f1d9b489c5
(v1.7.0) unit tests
2021-05-26 14:04:12 +02:00
dr. M.S. (Matthijs) Berends
41d279daa1
(v1.7.0) v1.7.0
2021-05-26 11:10:34 +02:00
dr. M.S. (Matthijs) Berends
ac73a8d849
v1.7.0
2021-05-24 15:29:17 +02:00
dr. M.S. (Matthijs) Berends
a13fd98e8b
(v1.6.0.9063) prepare new release
2021-05-24 09:00:11 +02:00
dr. M.S. (Matthijs) Berends
b210f1327c
(v1.6.0.9055) support codecov again
2021-05-21 20:20:51 +02:00
dr. M.S. (Matthijs) Berends
aeea00881e
(v1.6.0.9023) new unit test flow
2021-05-13 19:31:47 +02:00
dr. M.S. (Matthijs) Berends
29dbfa2f49
(v1.6.0.9021) join functions update
2021-05-12 18:15:03 +02:00
dr. M.S. (Matthijs) Berends
c5fff1c95c
(v1.6.0.9011) unit tests
2021-04-27 10:27:13 +02:00
dr. M.S. (Matthijs) Berends
8d6ceb6a15
(v1.5.0.9040) removal of isolate_identifier
2021-03-08 09:44:17 +01:00
dr. M.S. (Matthijs) Berends
850c123de7
(v1.5.0.9032) All group generics for MICs
2021-03-07 13:52:39 +01:00
dr. M.S. (Matthijs) Berends
601ea7377c
(v1.5.0.9019) use functions without loading AMR pkg
2021-02-17 10:58:13 +01:00
dr. M.S. (Matthijs) Berends
4a84894f79
(v1.5.0.9016) only_rsi_columns update, documentation
2021-02-08 14:18:42 +01:00
dr. M.S. (Matthijs) Berends
2eca8c3f01
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
2021-02-02 23:57:35 +01:00
dr. M.S. (Matthijs) Berends
1ba44776a1
(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
2021-01-22 10:20:41 +01:00
dr. M.S. (Matthijs) Berends
4eab095306
(v1.5.0.9006) major documentation update
2021-01-18 16:57:56 +01:00
dr. M.S. (Matthijs) Berends
7ebc534ccd
(v1.5.0.9003) verbose output of mdro()
2021-01-15 22:44:52 +01:00
dr. M.S. (Matthijs) Berends
d014955ce0
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
2021-01-12 22:08:04 +01:00
dr. M.S. (Matthijs) Berends
d3f007bf65
(v1.4.0.9053) unit test old R versions
2020-12-29 21:23:01 +01:00
dr. M.S. (Matthijs) Berends
afc325c314
(v1.4.0.9050) ab selectors base R
2020-12-27 20:32:40 +01:00
dr. M.S. (Matthijs) Berends
acbd0cf7ca
(v1.4.0.9046) get_episode
2020-12-27 00:07:00 +01:00
dr. M.S. (Matthijs) Berends
df37584189
(v1.4.0.9044) mo tibble printing, mo_shortname() fix
2020-12-24 23:29:10 +01:00
dr. M.S. (Matthijs) Berends
128ebcfd62
(v1.4.0.9043) documentation update
2020-12-22 00:51:17 +01:00
dr. M.S. (Matthijs) Berends
ee70883246
(v1.4.0.9042) auto dark theme website
2020-12-21 22:46:29 +01:00
dr. M.S. (Matthijs) Berends
81af41da3a
(v1.4.0.9041) updates based on review
2020-12-17 16:22:25 +01:00
dr. M.S. (Matthijs) Berends
c9fc7e8a45
(v1.4.0.9034) MIC printing update
2020-12-09 09:40:50 +01:00
dr. M.S. (Matthijs) Berends
2145f1d1ba
(v1.4.0.9033) documentation update
2020-12-08 12:37:25 +01:00
