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fbc9191b13
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new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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713290a9a6
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v0.6.1
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2019-03-28 22:05:03 +01:00 |
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afd12d5486
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ci fixes
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2019-03-26 14:42:56 +01:00 |
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29f444543d
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added Becker 2019
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2019-03-26 14:24:03 +01:00 |
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c6a12266e7
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DSMZ data
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2019-03-18 14:29:41 +01:00 |
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b561de462a
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global var
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2019-03-15 20:15:56 +01:00 |
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cf3bdb54c7
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global var fix
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2019-02-27 19:02:47 +01:00 |
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95c49fdf79
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global var fix
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2019-02-27 17:39:39 +01:00 |
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fb1fc3686c
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Catalogue of life
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2019-02-20 00:04:48 +01:00 |
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e6489483c7
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website update
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2019-01-29 20:38:45 +01:00 |
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46dcc7e2e8
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set_mo_source
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2019-01-21 15:53:01 +01:00 |
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c6c3088e9f
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select() fix for freq
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2019-01-17 12:08:04 +01:00 |
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8db87a15e9
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fixes
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2019-01-15 16:38:54 +01:00 |
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6652f7d82b
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fix warnings
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2019-01-04 09:49:42 +01:00 |
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6b2d464f8c
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big website update, licence txt update
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2019-01-02 23:24:07 +01:00 |
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b937662a97
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limits for scale_y_percent - Licence update
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2018-12-16 22:45:12 +01:00 |
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9ddf6dc530
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support A. species for as.mo, cleanup
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2018-11-24 20:25:09 +01:00 |
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83c7da85ab
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unit tests
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2018-11-16 22:28:55 +01:00 |
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9cd4ab928a
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speed improvement as.mo, freq title
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2018-10-31 12:10:49 +01:00 |
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707aa20a37
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fixes
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2018-10-23 14:59:36 +02:00 |
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ed17db0263
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renamed year columns to ref
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2018-10-01 14:44:40 +02:00 |
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3119a221e5
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authors from ITIS, diff for freq
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2018-10-01 11:39:43 +02:00 |
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2b0080995e
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speed improvement for as.mo, more old taxonomic names
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2018-09-27 23:23:48 +02:00 |
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9c566585b0
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first inclusion of ITIS data
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2018-09-24 23:33:29 +02:00 |
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db14781593
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add labels_rsi_count
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2018-09-16 22:11:17 +02:00 |
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b792a2754e
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added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
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2018-09-16 16:43:29 +02:00 |
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75fe4d401f
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new MOs, cleanup
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2018-09-01 21:19:46 +02:00 |
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2acdb1981c
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atc and bactid functions, readme update
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2018-08-25 22:01:14 +02:00 |
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3e87c8f409
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count_* functions
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2018-08-22 00:02:26 +02:00 |
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1ba7d883fe
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new ggplot enhancement
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2018-08-11 21:30:00 +02:00 |
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feab1cad6b
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small fixes
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2018-07-28 09:34:03 +02:00 |
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498e88b5cf
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improvement for forecasting resistance
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2018-07-26 16:30:42 +02:00 |
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6eaf33baf3
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speed improvements
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2018-07-15 22:56:41 +02:00 |
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e3e10c2e88
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fix for macOS and older tidyr versions
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2018-07-11 12:34:02 +02:00 |
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f63414d519
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new g.test, extra unit tests
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2018-07-10 12:27:07 +02:00 |
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fc30d3fb13
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freq: support for table
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2018-07-09 14:02:58 +02:00 |
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14b990d769
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kurtosis, skewness, start with ML
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2018-07-08 22:14:55 +02:00 |
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34ee0247ac
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addins and small improvements to microorganisms dataset
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2018-07-04 17:20:03 +02:00 |
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3527894b49
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new g.test() and edited freq()
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2018-07-01 21:40:37 +02:00 |
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a9bd5472d0
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top_freq
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2018-06-20 14:47:37 +02:00 |
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uscloud
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dcc26dd942
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Update freq function
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2018-05-22 16:34:22 +02:00 |
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970e3ed7f1
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EUCAST rules for MDRO
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2018-04-25 15:33:58 +02:00 |
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2509e2413d
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MDRO, freq tables, new print format for tibbles
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2018-04-18 12:24:54 +02:00 |
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fe803f7279
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use guess_bactid for GLIMS codes
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2018-03-19 21:23:21 +01:00 |
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502a44eb25
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- Added new function guess_bactid to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
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2018-03-19 12:43:22 +01:00 |
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62304dc23f
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first commit
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2018-02-21 11:52:31 +01:00 |
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