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mirror of https://github.com/msberends/AMR.git synced 2024-12-28 04:06:12 +01:00
Commit Graph

105 Commits

Author SHA1 Message Date
0dc0715dc6 CI tests 2019-05-13 12:21:57 +02:00
68cc7ef0d0 new antibiotics 2019-05-10 16:44:59 +02:00
cffb7787d8 cfta streptococci 2019-04-09 10:34:40 +02:00
fbc9191b13 new EUCAST rules algorithm 2019-04-05 18:47:39 +02:00
29f444543d added Becker 2019 2019-03-26 14:24:03 +01:00
c6a12266e7 DSMZ data 2019-03-18 14:29:41 +01:00
fdffc2791b memory for as.mo() 2019-03-15 13:57:25 +01:00
74e0ae21fd con WHONET, filter ab class 2019-03-05 22:47:42 +01:00
2565b60024 rlang dependency, new fungi 2019-02-28 13:56:28 +01:00
642f6571fe as.mo fix 2019-02-27 14:22:07 +01:00
41ad7a22c8 mo_rank mo_url, added Tremellales 2019-02-22 22:12:10 +01:00
fb1fc3686c Catalogue of life 2019-02-20 00:04:48 +01:00
54f8258f8c Catalogue of Life, replaces ITIS 2019-02-18 02:33:37 +01:00
76ed26d27e resistance predict update 2019-02-11 10:27:10 +01:00
1a1e81c5d2 as.rsi warning, site update 2019-02-10 09:13:06 +01:00
cbad93d92b wget dependency 2019-02-10 08:49:57 +01:00
ed30312048 mo codes for WHONET 2019-02-08 16:06:54 +01:00
587e00b7be is.rsi.eligible update 2019-02-04 12:24:07 +01:00
3efb54d016 freq update 2019-01-29 20:20:09 +01:00
f6336fdd89 quasiquotation for freq() 2019-01-28 11:20:32 +01:00
63e343d555 deps fix 2019-01-27 20:49:11 +01:00
18b75356a9 re-add atc_ddd and atc_groups 2019-01-27 13:33:43 +01:00
f836722269 atc_ functions 2019-01-26 23:22:56 +01:00
46dcc7e2e8 set_mo_source 2019-01-21 15:53:01 +01:00
c6c3088e9f select() fix for freq 2019-01-17 12:08:04 +01:00
8db87a15e9 fixes 2019-01-15 16:38:54 +01:00
046d195064 resistance predict 2019-01-15 12:45:24 +01:00
641d866db2 guess_ab_col, benchmarks 2019-01-11 20:37:23 +01:00
80ea555663 guess_ab 2019-01-03 23:56:19 +01:00
92a32b62a7 new website, freq updates 2018-12-29 22:24:19 +01:00
0b8084871d dplyr 0.8.0 support, fixes #7 2018-12-22 22:39:34 +01:00
2018d5b477 age and age_groups 2018-12-15 22:40:07 +01:00
8e8a9cd190 AI improvements 2018-12-07 12:04:55 +01:00
60fe98bbbd better as.mo handling 2018-12-06 14:36:39 +01:00
4fcc2b409a MDRO update 2018-11-16 20:50:50 +01:00
fab64e6728 read.4D improvements 2018-11-15 12:42:35 +01:00
6b0f4ffbd4 new kingdom 2018-11-09 13:11:54 +01:00
9be5e0318b freq: fix na.rm in groups 2018-11-08 16:10:03 +01:00
84e08f516a grouping var for freq 2018-11-06 16:41:59 +01:00
d15bb2ab3f read_4D 2018-11-05 15:30:49 +01:00
d07e9b904e new function get_locale 2018-11-05 13:20:32 +01:00
5476fecc73 eucast update 2018-11-01 20:23:33 +01:00
86b03577a7 fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00
0ef91be3ac param rules for EUCAST 2018-10-18 12:10:10 +02:00
693f64bdbf new EUCAST rules: clinical breakpoints 2018-10-17 17:32:34 +02:00
5b5b95a47b count_all and some fixes 2018-10-12 16:35:18 +02:00
95c9fdc552 CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
2018-10-09 13:53:33 +02:00
ed17db0263 renamed year columns to ref 2018-10-01 14:44:40 +02:00
3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
92c9cc2608 diff for freq, fix for mo_shortname 2018-09-29 21:54:32 +02:00