dr. M.S. (Matthijs) Berends
dc5559a2c4
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
dr. M.S. (Matthijs) Berends
b8f0f64287
(v2.1.1.9269) Support 7 new languages
2025-05-02 19:25:19 +02:00
dr. M.S. (Matthijs) Berends
2461631bce
(v2.1.1.9268) WISCA vignette, antibiogram sorting, fix translations
2025-05-01 14:45:21 +02:00
dr. M.S. (Matthijs) Berends
5e6bbdf3d1
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
dr. M.S. (Matthijs) Berends
407bc17311
(v2.1.1.9263) small as.sir fix
2025-04-29 16:51:29 +02:00
dr. M.S. (Matthijs) Berends
30caa5e654
(v2.1.1.9262) fix knit printing
2025-04-29 16:31:38 +02:00
dr. M.S. (Matthijs) Berends
6013a7edc5
(v2.1.1.9261) fix knit printing antibiograms
2025-04-29 16:29:12 +02:00
dr. M.S. (Matthijs) Berends
faa9ae0d85
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
dr. M.S. (Matthijs) Berends
6819473457
(v2.1.1.9259) Parallel computing for R < 4
2025-04-27 20:25:39 +02:00
dr. M.S. (Matthijs) Berends
52cd3e88cd
(v2.1.1.9258) fix for R <= 3.6
2025-04-27 17:53:13 +02:00
dr. M.S. (Matthijs) Berends
d2b3937a90
(v2.1.1.9257) adjust unit tests
2025-04-27 09:58:19 +02:00
dr. M.S. (Matthijs) Berends
f340e257fa
(v2.1.1.9256) unit tests
2025-04-26 21:29:50 +02:00
dr. M.S. (Matthijs) Berends
d166aa2c1d
(v2.1.1.9255) fix examples
2025-04-26 16:35:14 +02:00
dr. M.S. (Matthijs) Berends
92316d5ddc
(v2.1.1.9254) fix antimicrobial synonyms
2025-04-26 16:23:14 +02:00
dr. M.S. (Matthijs) Berends
4e7fca3b38
(v2.1.1.9253) parallel computing
2025-04-26 15:47:00 +02:00
dr. M.S. (Matthijs) Berends
abee2a954e
(v2.1.1.9252) fix MIC for >= and <=
2025-04-25 10:19:40 +02:00
dr. M.S. (Matthijs) Berends
6135805455
(v2.1.1.9251) fix colour on GitHub docs
2025-04-21 16:04:01 +02:00
dr. M.S. (Matthijs) Berends
4a336d040c
(v2.1.1.9250) Automated README and index.md
2025-04-21 15:37:26 +02:00
dr. M.S. (Matthijs) Berends
be13934fe7
(v2.1.1.9249) unit test
2025-04-20 17:49:47 +02:00
dr. M.S. (Matthijs) Berends
9e64d7708e
(v2.1.1.9248) unit test fix
2025-04-20 15:27:36 +02:00
dr. M.S. (Matthijs) Berends
ea443f7483
(v2.1.1.9247) CLSI/EUCAST 2025!
2025-04-20 12:55:31 +02:00
dr. M.S. (Matthijs) Berends
0bab49ff86
(v2.1.1.9246) website fix
2025-04-19 16:23:17 +02:00
dr. M.S. (Matthijs) Berends
f310318c5f
repo fix
2025-04-19 15:59:52 +02:00
dr. M.S. (Matthijs) Berends
492fe6872f
(v2.1.1.9244) automated GPT training data
2025-04-19 15:57:12 +02:00
dr. M.S. (Matthijs) Berends
ca00ed468e
(v2.1.1.9243) fix sir documentation
2025-04-18 16:32:45 +02:00
dr. M.S. (Matthijs) Berends
29b0ef1089
(v2.1.1.9242) sir log
2025-04-18 16:03:50 +02:00
dr. M.S. (Matthijs) Berends
579025f678
(v2.1.1.9241) fix sir
2025-04-18 13:25:59 +02:00
dr. M.S. (Matthijs) Berends
cf91e677c6
(v2.1.1.9240) fix sir interpretation
2025-04-16 15:22:12 +02:00
dr. M.S. (Matthijs) Berends
ec937e8179
(v2.1.1.9239) documentation
2025-04-14 09:40:35 +02:00
dr. M.S. (Matthijs) Berends
7c3320b967
update reproduction scripts links
2025-04-13 10:02:47 +02:00
dr. M.S. (Matthijs) Berends
d31371613e
(v2.1.1.9237) clean-up
2025-04-13 09:59:40 +02:00
dr. M.S. (Matthijs) Berends
40d7a971c3
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
dr. M.S. (Matthijs) Berends
36fd99e1f4
(v2.1.1.9235) New website!
2025-04-08 15:54:30 +01:00
dr. M.S. (Matthijs) Berends
a905303296
(v2.1.1.9234) fix CLSI
2025-04-07 17:36:01 +01:00
dr. M.S. (Matthijs) Berends
1fdab84103
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
dr. M.S. (Matthijs) Berends
63099cd81e
(v2.1.1.9232) is.mic() iteration, documentation cleanup
2025-03-31 10:51:31 +02:00
dr. M.S. (Matthijs) Berends
5f5b77bfaf
(v2.1.1.9231) Update EUCAST vignette
2025-03-29 18:03:31 +01:00
dr. M.S. (Matthijs) Berends
b972bbb96f
(v2.1.1.9230) deprecated resistance_predict(), data set folder name without space
2025-03-28 16:48:56 +01:00
dr. M.S. (Matthijs) Berends
bd873ac1bc
(v2.1.1.9229) unit tests
2025-03-28 11:40:09 +01:00
dr. M.S. (Matthijs) Berends
49da312506
(v2.1.1.9228) repo cleaning
2025-03-28 11:17:49 +01:00
dr. M.S. (Matthijs) Berends
d77ad6bd6e
(v2.1.1.9227) unit test fixes
2025-03-27 15:36:27 +01:00
dr. M.S. (Matthijs) Berends
969a42cc8c
(v2.1.1.9226) update intrinsic_resistant, unit test fixes
2025-03-27 15:20:22 +01:00
dr. M.S. (Matthijs) Berends
e6f88241b2
(v2.1.1.9225) fix geom_hline()/_vline() in MIC plotting, add EUCAT 1.2 in full, add London contribs, fix mo codes, add Kleb pneu complex
2025-03-26 17:19:17 +01:00
dr. M.S. (Matthijs) Berends
8deaf2c8eb
(v2.1.1.9224) skip tests on cran
2025-03-20 23:29:21 +01:00
dr. M.S. (Matthijs) Berends
bb110646db
(v2.1.1.9223) allow + ab
2025-03-20 22:56:32 +01:00
dr. M.S. (Matthijs) Berends
d147d6602d
(v2.1.1.9222) python bump
2025-03-20 22:02:44 +01:00
dr. M.S. (Matthijs) Berends
43660f2b18
(v2.1.1.9221) allow combined numeric MIC values
2025-03-20 21:47:45 +01:00
dr. M.S. (Matthijs) Berends
79f56ad8a4
(v2.1.1.9220) unit test
2025-03-19 16:13:43 +01:00
dr. M.S. (Matthijs) Berends
755e6f43b7
(v2.1.1.9219) unit tests
2025-03-19 16:06:23 +01:00
dr. M.S. (Matthijs) Berends
287e361a54
(v2.1.1.9218) Fix unit tests
2025-03-19 16:05:24 +01:00
dr. M.S. (Matthijs) Berends
4dc4398ad1
(v2.1.1.9217) allow + in amr selectors
2025-03-18 16:35:22 +01:00
dr. M.S. (Matthijs) Berends
8d8444c607
(v2.1.1.9216) PyPI access token
2025-03-17 08:56:27 +01:00
dr. M.S. (Matthijs) Berends
1f35ff2b0b
(v2.1.1.9215) python token
2025-03-16 18:50:37 +01:00
dr. M.S. (Matthijs) Berends
a092eb3ce3
(v2.1.1.9214) aaaaaand another attempt
2025-03-16 14:03:40 +01:00
dr. M.S. (Matthijs) Berends
c614d66495
(v2.1.1.9213) snapshots
2025-03-16 13:41:08 +01:00
dr. M.S. (Matthijs) Berends
7a39439fa9
(v2.1.1.9212) unit tests
2025-03-16 13:25:54 +01:00
dr. M.S. (Matthijs) Berends
98bc83da73
(v2.1.1.9211) fix python wrapper
2025-03-16 13:11:26 +01:00
dr. M.S. (Matthijs) Berends
ceb3e6675d
(v2.1.1.9210) unit tsts
2025-03-15 20:58:05 +01:00
dr. M.S. (Matthijs) Berends
5c11b924de
(v2.1.1.9209) unit tests
2025-03-15 20:46:33 +01:00
dr. M.S. (Matthijs) Berends
6bdc798734
(v2.1.1.9208) unit tests
2025-03-15 20:30:29 +01:00
dr. M.S. (Matthijs) Berends
d717bd3f87
(v2.1.1.9207) fix PythonPackage
2025-03-15 16:19:03 +01:00
dr. M.S. (Matthijs) Berends
7631e82ae6
(v2.1.1.9206) update precommit hook
2025-03-15 16:17:27 +01:00
dr. M.S. (Matthijs) Berends
ede1cdfd99
(v2.1.1.9205) Fix python wrapper
2025-03-15 16:14:29 +01:00
dr. M.S. (Matthijs) Berends
afb97ad38f
(v2.1.1.9204) move python package to separate branch
2025-03-15 16:02:57 +01:00
dr. M.S. (Matthijs) Berends
7f1ae1f474
(v2.1.1.9203) unit tests
2025-03-15 13:25:23 +01:00
dr. M.S. (Matthijs) Berends
f758ab60f3
run MICs and disks if detected
2025-03-14 17:23:24 +01:00
dr. M.S. (Matthijs) Berends
6cc273bbc7
(v2.1.1.9201) oops
2025-03-14 17:12:12 +01:00
dr. M.S. (Matthijs) Berends
72f2e723fb
(v2.1.1.9200) new argument capped_mic_handling, add Search to website
2025-03-14 17:01:50 +01:00
dr. M.S. (Matthijs) Berends
58d7aa8790
(v2.1.1.9199) fix eucast
2025-03-14 13:43:22 +01:00
dr. M.S. (Matthijs) Berends
e134e01418
(v2.1.1.9198) support eucast expert rules 14 and 13.1
2025-03-14 10:10:35 +01:00
dr. M.S. (Matthijs) Berends
eafe9bd113
(v2.1.1.9197) Final fixes for vetmed
2025-03-13 15:51:58 +01:00
dr. M.S. (Matthijs) Berends
861331b1df
(v2.1.1.9196) fix eucast, unit tests
2025-03-13 15:38:39 +01:00
dr. M.S. (Matthijs) Berends
9aab129ea6
(v2.1.1.9195) add BTL-S, fix ranks in unknown microorganisms
2025-03-13 14:30:14 +01:00
dr. M.S. (Matthijs) Berends
a7ef22a21e
(v2.1.1.9194) new argument for missing R breakpoints - updated from WHONET
2025-03-12 16:24:38 +01:00
dr. M.S. (Matthijs) Berends
e1b7252ff6
(v2.1.1.9193) new antimicrobials for screening
2025-03-12 15:09:28 +01:00
dr. M.S. (Matthijs) Berends
067a8aca66
(v2.1.1.9192) fix fluoroquinolones and add bleomycin
2025-03-10 17:04:35 +01:00
dr. M.S. (Matthijs) Berends
32024e597a
(v2.1.1.9191) unit tests
2025-03-10 12:16:45 +01:00
dr. M.S. (Matthijs) Berends
a2c2be23c1
(v2.1.1.9190) antibiotics deprecation in antibiogram()
2025-03-09 10:41:11 +01:00
dr. M.S. (Matthijs) Berends
c7af397edf
(v2.1.1.9189) Add the awesome Aislinn Cook
2025-03-07 23:25:50 +01:00
dr. M.S. (Matthijs) Berends
245483e41c
(v2.1.1.9188) fix antibiogram plot
2025-03-07 23:01:25 +01:00
dr. M.S. (Matthijs) Berends
b67613ce08
(v2.1.1.9187) WISCA fix
2025-03-07 22:27:21 +01:00
dr. M.S. (Matthijs) Berends
f7938289eb
(v2.1.1.9186) replace antibiotics with antimicrobials!
2025-03-07 20:43:26 +01:00
dr. M.S. (Matthijs) Berends
f2b2a450cb
issue template
2025-03-03 19:36:26 +01:00
dr. M.S. (Matthijs) Berends
ca435216d4
issue template
2025-03-03 19:32:35 +01:00
dr. M.S. (Matthijs) Berends
e28dd86c43
(v2.1.1.9183) unit test for older R versions
2025-03-03 14:54:42 +01:00
dr. M.S. (Matthijs) Berends
9a9468fa84
(v2.1.1.9182) fix AMR selectors for tidymodels, add unit tests
2025-03-03 12:59:27 +01:00
dr. M.S. (Matthijs) Berends
fa519105eb
lintr fix
2025-02-27 16:44:56 +01:00
dr. M.S. (Matthijs) Berends
07efc292bc
(v2.1.1.9163) cleanup
2025-02-27 14:04:29 +01:00
dr. M.S. (Matthijs) Berends
1a43882583
ab fix
2025-02-26 21:34:07 +01:00
dr. M.S. (Matthijs) Berends
22e66741cc
(v2.1.1.9160) cleanup
2025-02-26 20:28:33 +01:00
dr. M.S. (Matthijs) Berends
0c3ea4b538
(v2.1.1.9159) new approach as.ab()
2025-02-26 19:23:54 +01:00
dr. M.S. (Matthijs) Berends
122bca0f95
(v2.1.1.9158) updated as.ab
2025-02-26 13:32:16 +01:00
dr. M.S. (Matthijs) Berends
195dfb4b91
(v2.1.1.9157) improved as.ab(), fixed knit_print of antibiogram
2025-02-26 13:27:20 +01:00
dr. M.S. (Matthijs) Berends
b10989f431
(v2.1.1.9156) fix for knitr in WISCA
2025-02-23 19:18:42 +01:00
dr. M.S. (Matthijs) Berends
aa8f6af185
(v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro
2025-02-23 11:18:08 +01:00
dr. M.S. (Matthijs) Berends
226d10f546
(v2.1.1.9154) documentation fix
2025-02-22 22:07:56 +01:00
dr. M.S. (Matthijs) Berends
abb5602532
(v2.1.1.9153) mic plot fix
2025-02-22 21:26:38 +01:00
dr. M.S. (Matthijs) Berends
671d657fd8
(v2.1.1.9152) MIC plot fix
2025-02-18 08:07:02 +01:00
dr. M.S. (Matthijs) Berends
ef02f4a7f2
(v2.1.1.9151) update readme
2025-02-15 20:53:12 +01:00
dr. M.S. (Matthijs) Berends
9650545d6e
(v2.1.1.9150) unit tests
2025-02-15 13:40:51 +01:00
