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0c46f61260
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MO group fixes
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2023-07-12 15:04:48 +01:00 |
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8df1cd8d97
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interpretation fixes
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2023-07-11 09:50:45 +02:00 |
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dab20c09f6
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unit test
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2023-07-10 18:30:26 +02:00 |
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e1966503ee
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unit testing R4.3
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2023-05-26 20:37:00 +02:00 |
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766db4e21f
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as.mo fix
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2023-05-26 19:20:21 +02:00 |
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91fa73dedf
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add oxygen tolerance
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2023-05-11 21:56:27 +02:00 |
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bf08d136a0
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fix coercing NA to custom codes, fixes #107
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2023-05-08 13:04:18 +02:00 |
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9148a2dcf4
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fix mo_rank() for 'unknown' MOs
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2023-04-20 15:20:41 +02:00 |
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cabffb22fd
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anaerobic codes
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2023-04-17 11:26:19 +02:00 |
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1a02d302d4
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Fix translatable strings
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2023-04-15 09:32:13 +02:00 |
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ed70f95380
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Fix clinical breakpoints
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2023-04-14 23:14:34 +02:00 |
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147f9112e9
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Fix some WHONET codes
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2023-04-14 11:12:26 +02:00 |
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c28cfa3a77
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fix documentation
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2023-03-16 08:55:37 +01:00 |
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dd7cc86485
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help page %like%
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2023-03-14 19:49:50 +01:00 |
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049baf0a71
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fix for antibiograms on R < 3.5
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2023-02-24 09:43:10 +01:00 |
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e70f2cd32c
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knitr format
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2023-02-23 16:27:40 +01:00 |
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dad25302f2
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make rsi work in more cases, documentation update
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2023-02-22 14:38:57 +01:00 |
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c51fb24363
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pm_bind_rows
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2023-02-11 22:28:48 +01:00 |
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b146de6d7f
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fix for bind_rows2, added 4 langs
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2023-02-11 21:57:12 +01:00 |
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9e99e66f01
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use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
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2023-02-06 11:57:22 +01:00 |
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7b00b4f34a
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unit tests
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2023-01-24 14:52:15 +01:00 |
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830c67f1bf
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documentation, unit tests
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2023-01-24 10:20:27 +01:00 |
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19fd0ef121
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sort sir history
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2023-01-23 15:01:21 +01:00 |
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Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |
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24b12024ce
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unit test fix
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2023-01-20 09:45:03 +01:00 |
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593d740b84
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documentation, file permissions
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2023-01-19 12:54:53 +01:00 |
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33f269e2f4
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contrib update
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2023-01-12 23:16:05 +01:00 |
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51906d6f97
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no overwriting taxonomy when adding microorganisms
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2023-01-12 11:33:28 +01:00 |
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268ec31d92
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unit tests
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2023-01-05 18:21:48 +01:00 |
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a98d0d75ea
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styler dep
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2023-01-05 14:46:44 +01:00 |
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6f4bb603ec
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unit tests
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2022-12-20 22:18:50 +01:00 |
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f0a2cdbf5e
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
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b1b7534c78
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incorporate Bartlett et al (2022)
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2022-12-19 15:32:41 +01:00 |
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23fe427cbc
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
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5f3a7694aa
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
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8da2467209
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updated taxonomy
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2022-12-12 00:14:56 +01:00 |
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eed1c14b96
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website update
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2022-12-11 11:44:29 +01:00 |
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f6862a139d
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
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Dr. Matthijs Berends
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496c08d851
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Implement extensive support for antiviral agents support (#77)
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2022-11-13 08:46:10 +01:00 |
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9444ed6d1d
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
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d40e0ef20b
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
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3d9faf89cf
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ATC and DDD update
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2022-10-29 19:01:23 +02:00 |
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6ad7857d39
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fix missing R breakpoints
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2022-10-29 14:15:23 +02:00 |
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c2801ba7a1
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new rsi_translation
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2022-10-22 22:00:15 +02:00 |
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b753b84128
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fix for mo type translation
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2022-10-06 12:11:51 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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e7af5fc716
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fix AMR vignette
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2022-08-28 22:38:08 +02:00 |
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303d61b473
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new tibble export
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2022-08-27 20:49:37 +02:00 |
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3864ab2fb8
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Feather and Parquet files
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2022-08-26 22:25:15 +02:00 |
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7226b70c3d
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update languages
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2022-08-20 20:17:14 +02:00 |
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