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27380fa021
|
fixes for microorganisms.codes
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2019-05-28 16:50:40 +02:00 |
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60983a1640
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added mdr_tb()
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2019-05-23 16:58:59 +02:00 |
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4c3cf85a65
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ab_info, other bug fixes
|
2019-05-16 21:20:00 +02:00 |
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fcc77164e9
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mdro fix
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2019-05-11 23:30:10 +02:00 |
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68cc7ef0d0
|
new antibiotics
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2019-05-10 16:44:59 +02:00 |
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fbc9191b13
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new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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29f444543d
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added Becker 2019
|
2019-03-26 14:24:03 +01:00 |
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c6a12266e7
|
DSMZ data
|
2019-03-18 14:29:41 +01:00 |
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504a042fba
|
uncertainty levels, new WHONET codes
|
2019-03-12 12:19:27 +01:00 |
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e835525cf6
|
unknown codes, rsi fix
|
2019-03-02 22:47:04 +01:00 |
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2565b60024
|
rlang dependency, new fungi
|
2019-02-28 13:56:28 +01:00 |
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f9ded23023
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as.mo improvement
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2019-02-26 12:33:26 +01:00 |
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41ad7a22c8
|
mo_rank mo_url, added Tremellales
|
2019-02-22 22:12:10 +01:00 |
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fb1fc3686c
|
Catalogue of life
|
2019-02-20 00:04:48 +01:00 |
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54f8258f8c
|
Catalogue of Life, replaces ITIS
|
2019-02-18 02:33:37 +01:00 |
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efb2af9e3a
|
benchmarks plots
|
2019-02-14 10:23:51 +01:00 |
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ed30312048
|
mo codes for WHONET
|
2019-02-08 16:06:54 +01:00 |
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587e00b7be
|
is.rsi.eligible update
|
2019-02-04 12:24:07 +01:00 |
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3efb54d016
|
freq update
|
2019-01-29 20:20:09 +01:00 |
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6aae206320
|
WHONET/EARS-Net support
|
2019-01-29 00:06:50 +01:00 |
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f4ff98b470
|
WHO update, antibiotics update
|
2019-01-25 13:18:41 +01:00 |
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46dcc7e2e8
|
set_mo_source
|
2019-01-21 15:53:01 +01:00 |
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31e977937d
|
fix for as.mo and freq
|
2018-11-30 12:05:59 +01:00 |
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9ddf6dc530
|
support A. species for as.mo, cleanup
|
2018-11-24 20:25:09 +01:00 |
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6b0f4ffbd4
|
new kingdom
|
2018-11-09 13:11:54 +01:00 |
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9cd4ab928a
|
speed improvement as.mo, freq title
|
2018-10-31 12:10:49 +01:00 |
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86b03577a7
|
fix for as.mo, added also_single_tested
|
2018-10-19 13:53:31 +02:00 |
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693f64bdbf
|
new EUCAST rules: clinical breakpoints
|
2018-10-17 17:32:34 +02:00 |
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|
5b5b95a47b
|
count_all and some fixes
|
2018-10-12 16:35:18 +02:00 |
|
|
|
95c9fdc552
|
CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
|
2018-10-09 13:53:33 +02:00 |
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|
ed17db0263
|
renamed year columns to ref
|
2018-10-01 14:44:40 +02:00 |
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3119a221e5
|
authors from ITIS, diff for freq
|
2018-10-01 11:39:43 +02:00 |
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92c9cc2608
|
diff for freq, fix for mo_shortname
|
2018-09-29 21:54:32 +02:00 |
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a6aa9e95fb
|
completed old taxonomic names
|
2018-09-28 20:13:13 +02:00 |
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|
2b0080995e
|
speed improvement for as.mo, more old taxonomic names
|
2018-09-27 23:23:48 +02:00 |
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|
450992baea
|
new: 1680 old taxonomic names
|
2018-09-25 16:44:40 +02:00 |
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|
9c566585b0
|
first inclusion of ITIS data
|
2018-09-24 23:33:29 +02:00 |
|
|
|
5d80cef338
|
added taxonomic data from ITIS
|
2018-09-17 20:53:32 +02:00 |
|
|
|
b792a2754e
|
added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
|
2018-09-16 16:43:29 +02:00 |
|
|
|
b0ca49d68d
|
small improvement for is.rsi.eligible, more unit tests
|
2018-09-14 11:54:01 +02:00 |
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|
|
b83e6a9380
|
algoritm improvement, removed all Catabacter except for C. hongkongensis
|
2018-09-10 11:40:54 +02:00 |
|
|
|
26f5be0033
|
support for portuguese, language determination based on system
|
2018-09-08 16:06:47 +02:00 |
|
|
|
c5073f2fd1
|
small fix for microorganisms data set
|
2018-09-06 16:50:03 +02:00 |
|
|
|
790bd1622d
|
added vanA to vanE positive Enterococci
|
2018-09-05 09:49:19 +02:00 |
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|
|
b388e3fee7
|
Support for German and Spanish microorganism properties, cleanup
|
2018-09-04 11:33:30 +02:00 |
|
|
|
75fe4d401f
|
new MOs, cleanup
|
2018-09-01 21:19:46 +02:00 |
|
|
|
5965d3c794
|
replaced bactid by mo
|
2018-08-31 13:36:19 +02:00 |
|
|
|
029157b3be
|
163 new trade names, added ab_tradenames
|
2018-08-29 12:27:37 +02:00 |
|
|
|
972fc4f6c7
|
ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid
|
2018-08-28 13:51:13 +02:00 |
|
|
|
2acdb1981c
|
atc and bactid functions, readme update
|
2018-08-25 22:01:14 +02:00 |
|
