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python-wrapper

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#117

#134

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#93

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v0.1.0

v0.1.1

v0.2.0

v0.3.0

v0.4.0

v0.5.0

v0.6.0

v0.6.1

v0.7.0

v0.7.1

v0.8.0

v0.9.0

v1.0.0

v1.0.1

v1.1.0

v1.2.0

v1.3.0

v1.4.0

v1.5.0

v1.6.0

v1.7.0

v1.7.1

v1.8.0

v1.8.1

v1.8.2

v2.0.0

v2.1.0

v2.1.1

994d157aa6 (v1.6.0.9025) unit test update dr. M.S. (Matthijs) Berends 2021-05-13 20:53:56 +02:00
9d9d62eba4 (v1.6.0.9024) unit test update dr. M.S. (Matthijs) Berends 2021-05-13 20:49:47 +02:00
aeea00881e (v1.6.0.9023) new unit test flow dr. M.S. (Matthijs) Berends 2021-05-13 19:31:47 +02:00
655b813e99 (v1.6.0.9022) unit test fix dr. M.S. (Matthijs) Berends 2021-05-13 15:56:12 +02:00
29dbfa2f49 (v1.6.0.9021) join functions update dr. M.S. (Matthijs) Berends 2021-05-12 18:15:03 +02:00
3319fbae58 (v1.6.0.9020) fix for skimr in dplyr 1.0.6 dr. M.S. (Matthijs) Berends 2021-05-06 15:17:11 +02:00
5899678b74 (v1.6.0.9019) website fix dr. M.S. (Matthijs) Berends 2021-05-05 15:47:39 +02:00
0aca719929 (v1.6.0.9018) unit tests dr. M.S. (Matthijs) Berends 2021-05-04 15:20:43 +02:00
5679ccdaf9 (v1.6.0.9017) extra system codes dr. M.S. (Matthijs) Berends 2021-05-04 12:47:33 +02:00
f33e61bac7 (v1.6.0.9016) website update and c() fixes dr. M.S. (Matthijs) Berends 2021-05-03 13:06:43 +02:00
12a8d59869 (v1.6.0.9015) italicise_taxonomy dr. M.S. (Matthijs) Berends 2021-05-03 10:47:32 +02:00
e405de079c (v1.6.0.9014) as.rsi() for numeric values dr. M.S. (Matthijs) Berends 2021-04-30 13:18:48 +02:00
a9fd4aa49f (v1.6.0.9013) website update dr. M.S. (Matthijs) Berends 2021-04-29 17:16:30 +02:00
5e06b20d43 (v1.6.0.9012) unit tests dr. M.S. (Matthijs) Berends 2021-04-27 11:28:17 +02:00
c5fff1c95c (v1.6.0.9011) unit tests dr. M.S. (Matthijs) Berends 2021-04-27 10:27:13 +02:00
93683a4ae2 (v1.6.0.9010) big first_isolate() update dr. M.S. (Matthijs) Berends 2021-04-26 23:57:37 +02:00
5f9e7bd3ee (v1.6.0.9009) key_antibiotics update dr. M.S. (Matthijs) Berends 2021-04-23 16:13:26 +02:00
70b803dbb6 (v1.6.0.9008) unlike, bugfix for col_mo naming dr. M.S. (Matthijs) Berends 2021-04-23 09:59:36 +02:00
c6289c3fc3 (v1.6.0.9007) documentation custom eucast rules, progress bar as.mo dr. M.S. (Matthijs) Berends 2021-04-20 10:46:17 +02:00
de66eccf43 (v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi dr. M.S. (Matthijs) Berends 2021-04-16 14:59:57 +02:00
24ac18a99d (v1.6.0.9005) unit test fix dr. M.S. (Matthijs) Berends 2021-04-16 13:24:59 +02:00
9842ef9660 (v1.6.0.9004) unit test fix dr. M.S. (Matthijs) Berends 2021-04-16 12:02:57 +02:00
00d3e437a8 (v1.6.0.9003) like() fix dr. M.S. (Matthijs) Berends 2021-04-16 11:41:05 +02:00
d277d58475 (v1.6.0.9002) R-3.0 installation fix dr. M.S. (Matthijs) Berends 2021-04-12 14:24:40 +02:00
6ff5448192 (v1.6.0.9001) support Inf for episodes dr. M.S. (Matthijs) Berends 2021-04-12 12:35:13 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules dr. M.S. (Matthijs) Berends 2021-04-07 08:37:42 +02:00
551f99dc8f v1.6.0 v1.6.0 dr. M.S. (Matthijs) Berends 2021-03-15 07:23:21 +01:00
4e0a9533ad (v1.5.0.9041) SNOMED update dr. M.S. (Matthijs) Berends 2021-03-11 21:42:30 +01:00
8d6ceb6a15 (v1.5.0.9040) removal of isolate_identifier dr. M.S. (Matthijs) Berends 2021-03-08 09:44:17 +01:00
a7c9b4c295 (v1.5.0.9039) handle first isolates for missing antibiograms dr. M.S. (Matthijs) Berends 2021-03-08 02:38:32 +01:00
461793dc34 (v1.5.0.9038) quick test dr. M.S. (Matthijs) Berends 2021-03-08 01:24:37 +01:00
a12975bc6e (v1.5.0.9037) quick test dr. M.S. (Matthijs) Berends 2021-03-08 00:13:13 +01:00
68163e3089 (v1.5.0.9036) quick test dr. M.S. (Matthijs) Berends 2021-03-07 22:45:05 +01:00
2f0fc3cab7 (v1.5.0.9035) quick test dr. M.S. (Matthijs) Berends 2021-03-07 22:15:25 +01:00
450bbe5fb7 (v1.5.0.9034) unit test fix dr. M.S. (Matthijs) Berends 2021-03-07 21:16:45 +01:00
1bbf409fe5 (v1.5.0.9033) as.rsi fix dr. M.S. (Matthijs) Berends 2021-03-07 16:15:43 +01:00
850c123de7 (v1.5.0.9032) All group generics for MICs dr. M.S. (Matthijs) Berends 2021-03-07 13:52:39 +01:00
91dd755cac (v1.5.0.9031) math processing of MICs dr. M.S. (Matthijs) Berends 2021-03-05 15:36:39 +01:00
0d29bde693 (v1.5.0.9030) as.ab() speed improvement dr. M.S. (Matthijs) Berends 2021-03-05 10:32:09 +01:00
0e0e3c4ffa (v1.5.0.9029) added missing families and orders dr. M.S. (Matthijs) Berends 2021-03-05 01:31:46 +01:00
ddf88345f1 (v1.5.0.9028) Updated taxonomy until March 2021 dr. M.S. (Matthijs) Berends 2021-03-04 23:28:32 +01:00
41f94cde97 (v1.5.0.9027) website update dr. M.S. (Matthijs) Berends 2021-02-26 12:11:29 +01:00
1737d56ae4 (v1.5.0.9026) vignette update, support for GISA dr. M.S. (Matthijs) Berends 2021-02-25 12:31:12 +01:00
a673407904 (v1.5.0.9025) big plot and ggplot generics update dr. M.S. (Matthijs) Berends 2021-02-25 10:33:08 +01:00
31ceba5441 (v1.5.0.9024) more speed improvements dr. M.S. (Matthijs) Berends 2021-02-22 20:21:33 +01:00
0fdabff1ba (v1.5.0.9023) mo properties speed improvement dr. M.S. (Matthijs) Berends 2021-02-21 23:19:40 +01:00
062c49fca1 (v1.5.0.9022) mo properties speed improvement dr. M.S. (Matthijs) Berends 2021-02-21 22:56:35 +01:00
5ef8cb41a7 (v1.5.0.9021) improve speed of %like% dr. M.S. (Matthijs) Berends 2021-02-21 20:15:09 +01:00
daa12ced2c (v1.5.0.9020) translation fix dr. M.S. (Matthijs) Berends 2021-02-18 23:23:14 +01:00
601ea7377c (v1.5.0.9019) use functions without loading AMR pkg dr. M.S. (Matthijs) Berends 2021-02-17 10:58:13 +01:00
2dd0656355 (v1.5.0.9018) fix unit tests dr. M.S. (Matthijs) Berends 2021-02-09 12:28:15 +01:00
cb404492b2 (v1.5.0.9017) unit testing dr. M.S. (Matthijs) Berends 2021-02-08 21:09:36 +01:00
4a84894f79 (v1.5.0.9016) only_rsi_columns update, documentation dr. M.S. (Matthijs) Berends 2021-02-08 14:18:42 +01:00
8fda473e49 (v1.5.0.9015) unit test fix, grouped first isolates dr. M.S. (Matthijs) Berends 2021-02-04 16:48:16 +01:00
2eca8c3f01 (v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement dr. M.S. (Matthijs) Berends 2021-02-02 23:57:35 +01:00
20d638c193 (v1.5.0.9013) updated tibble printing colours dr. M.S. (Matthijs) Berends 2021-01-28 16:09:30 +01:00
331c1f6508 (v1.5.0.9012) ampc_cephalosporin_resistance for I dr. M.S. (Matthijs) Berends 2021-01-25 21:58:00 +01:00
24eb4453db (v1.5.0.9011) small dosage update dr. M.S. (Matthijs) Berends 2021-01-24 23:27:11 +01:00
286eaa9699 (v1.5.0.9010) MDRO vignette update, get_episode for < day dr. M.S. (Matthijs) Berends 2021-01-24 14:48:56 +01:00
1a88caa119 (v1.5.0.9009) unit test fixes dr. M.S. (Matthijs) Berends 2021-01-22 10:55:07 +01:00
1ba44776a1 (v1.5.0.9008) Internal data sets to pkg, speed for auto col determination dr. M.S. (Matthijs) Berends 2021-01-22 10:20:41 +01:00
27f084d819 (v1.5.0.9007) updated unit tests dr. M.S. (Matthijs) Berends 2021-01-18 18:45:43 +01:00
4eab095306 (v1.5.0.9006) major documentation update dr. M.S. (Matthijs) Berends 2021-01-18 16:57:56 +01:00
e95218c0d1 (v1.5.0.9005) custom MDRO guideline dr. M.S. (Matthijs) Berends 2021-01-17 10:35:21 +01:00
e699de955c (v1.5.0.9004) custom MDRO guideline dr. M.S. (Matthijs) Berends 2021-01-17 00:26:48 +01:00
7ebc534ccd (v1.5.0.9003) verbose output of mdro() dr. M.S. (Matthijs) Berends 2021-01-15 22:44:52 +01:00
6745f3fb17 (v1.5.0.9002) doc update dr. M.S. (Matthijs) Berends 2021-01-14 15:51:41 +01:00
bc00470dca (v1.5.0.9001) more informative argument errors dr. M.S. (Matthijs) Berends 2021-01-14 14:41:44 +01:00
d014955ce0 (v.1.5.0.9000) implementation of EUCAST rules v11 (2021) dr. M.S. (Matthijs) Berends 2021-01-12 22:08:04 +01:00
3b84b8be75 v1.5.0 v1.5.0 dr. M.S. (Matthijs) Berends 2021-01-06 11:16:17 +01:00
1563dcd1aa (v1.4.0.9062) unit test fix dr. M.S. (Matthijs) Berends 2021-01-04 14:46:17 +01:00
a7ea4c9d2f (v1.4.0.9061) ab class selector fix dr. M.S. (Matthijs) Berends 2021-01-04 14:16:09 +01:00
8d117820b8 (v1.4.0.9060) ab class selector fix dr. M.S. (Matthijs) Berends 2021-01-04 13:39:06 +01:00
c9de74c81a (v1.4.0.9059) ab class selector fix dr. M.S. (Matthijs) Berends 2021-01-04 12:29:25 +01:00
82cfa24ea4 (v1.4.0.9058) GH actions update dr. M.S. (Matthijs) Berends 2021-01-04 11:27:37 +01:00
daac96fefe (v1.4.0.9057) GH actions update dr. M.S. (Matthijs) Berends 2021-01-04 09:49:42 +01:00
63a4dda467 (v1.4.0.9056) subsetting ab class selectors for base R dr. M.S. (Matthijs) Berends 2021-01-03 23:40:05 +01:00
ecac443f86 (v1.4.0.9055) more unit tests dr. M.S. (Matthijs) Berends 2020-12-31 13:44:58 +01:00
10dec96058 (v1.4.0.9054) unit test update dr. M.S. (Matthijs) Berends 2020-12-29 22:06:01 +01:00
d3f007bf65 (v1.4.0.9053) unit test old R versions dr. M.S. (Matthijs) Berends 2020-12-29 21:23:01 +01:00
526f8afb08 (v1.4.0.9052) replaced all sapply's with type-safe vapply's dr. M.S. (Matthijs) Berends 2020-12-28 22:24:33 +01:00
ccf13dd6c0 (v1.4.0.9051) ab class dr. M.S. (Matthijs) Berends 2020-12-27 23:19:41 +01:00
afc325c314 (v1.4.0.9050) ab selectors base R dr. M.S. (Matthijs) Berends 2020-12-27 20:32:40 +01:00
175e33abba (v1.4.0.9049) unit tests dr. M.S. (Matthijs) Berends 2020-12-27 15:07:01 +01:00
ed198916bf (v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants dr. M.S. (Matthijs) Berends 2020-12-27 14:23:11 +01:00
8b52f9b1be (v1.4.0.9047) unit tests dr. M.S. (Matthijs) Berends 2020-12-27 00:30:28 +01:00
acbd0cf7ca (v1.4.0.9046) get_episode dr. M.S. (Matthijs) Berends 2020-12-27 00:07:00 +01:00
291f802be3 (v1.4.0.9045) unit tests dr. M.S. (Matthijs) Berends 2020-12-25 00:06:11 +01:00
df37584189 (v1.4.0.9044) mo tibble printing, mo_shortname() fix dr. M.S. (Matthijs) Berends 2020-12-24 23:29:10 +01:00
128ebcfd62 (v1.4.0.9043) documentation update dr. M.S. (Matthijs) Berends 2020-12-22 00:51:17 +01:00
ee70883246 (v1.4.0.9042) auto dark theme website dr. M.S. (Matthijs) Berends 2020-12-21 22:46:29 +01:00
81af41da3a (v1.4.0.9041) updates based on review dr. M.S. (Matthijs) Berends 2020-12-17 16:22:25 +01:00
1faa816090 (v1.4.0.9040) LA-MRSA / CA-MRSA dr. M.S. (Matthijs) Berends 2020-12-16 16:18:53 +01:00
203bc20eb0 (v1.4.0.9039) more unit tests dr. M.S. (Matthijs) Berends 2020-12-13 20:44:32 +01:00
ac22b8d5c1 (v1.4.0.9038) docu update dr. M.S. (Matthijs) Berends 2020-12-13 13:44:04 +01:00
c8bcecf232 (v1.4.0.9037) random_* functions dr. M.S. (Matthijs) Berends 2020-12-12 23:17:29 +01:00
2edd3339db (v1.4.0.9036) more unit tests dr. M.S. (Matthijs) Berends 2020-12-11 12:17:23 +01:00
23ddc6004b (v1.4.0.9035) eucast_rules fix dr. M.S. (Matthijs) Berends 2020-12-11 09:05:03 +01:00
c9fc7e8a45 (v1.4.0.9034) MIC printing update dr. M.S. (Matthijs) Berends 2020-12-09 09:40:50 +01:00
2145f1d1ba (v1.4.0.9033) documentation update dr. M.S. (Matthijs) Berends 2020-12-08 12:37:25 +01:00