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Delete .zenodo.json MS Berends 2018-08-20 21:05:25 +02:00
eb4ecd9108

Update .zenodo.json v0.3.0 MS Berends 2018-08-20 20:50:56 +02:00
8bad33858e readme typo dr. M.S. (Matthijs) Berends 2018-08-15 11:12:38 +02:00
bc7e36b533 v0.3.0 dr. M.S. (Matthijs) Berends 2018-08-14 14:06:18 +02:00
6bab01948e v0.3.0 dr. M.S. (Matthijs) Berends 2018-08-14 13:25:24 +02:00
1699d7b8b3 better example of grouping variable in ggplot_rsi dr. M.S. (Matthijs) Berends 2018-08-14 12:07:03 +02:00
b0995362af testthat error dr. M.S. (Matthijs) Berends 2018-08-14 12:00:01 +02:00
533342583a Travis checks dr. M.S. (Matthijs) Berends 2018-08-14 11:37:40 +02:00
324d8b955e AppVeyor update dr. M.S. (Matthijs) Berends 2018-08-14 11:25:36 +02:00
7584c929a5 new AppVeyor environment dr. M.S. (Matthijs) Berends 2018-08-14 08:57:17 +02:00
e5193c7749 AppVeyor dr. M.S. (Matthijs) Berends 2018-08-13 23:05:53 +02:00
59ce1eb1b1 ggplot_rsi improvements dr. M.S. (Matthijs) Berends 2018-08-13 16:42:37 +02:00
dba06c3295 abname improvement, small fixes dr. M.S. (Matthijs) Berends 2018-08-13 11:00:53 +02:00
ce2cdb9309 support groups for portion_df, update README dr. M.S. (Matthijs) Berends 2018-08-12 22:34:03 +02:00
e5d32cafe0 new unit tests for ggplot, small fixes dr. M.S. (Matthijs) Berends 2018-08-12 17:44:06 +02:00
1ba7d883fe new ggplot enhancement dr. M.S. (Matthijs) Berends 2018-08-11 21:30:00 +02:00
4680df1e9c travis: no devel for osx dr. M.S. (Matthijs) Berends 2018-08-10 15:06:09 +02:00
53fa198e35 new portion functions dr. M.S. (Matthijs) Berends 2018-08-10 15:01:05 +02:00
ae2433a020 rsi family for resistance analysis dr. M.S. (Matthijs) Berends 2018-08-03 14:49:29 +02:00
227121af3d add Dialister to microorganisms dr. M.S. (Matthijs) Berends 2018-08-03 11:46:06 +02:00
db5a0d32a5 typos of Becker algorithm dr. M.S. (Matthijs) Berends 2018-08-03 10:58:48 +02:00
bd9bcfef78 thesis advisors dr. M.S. (Matthijs) Berends 2018-08-03 09:59:39 +02:00
6262315527 Becker classification Lancefield classification Added Lancefield groups to microorganisms data set dr. M.S. (Matthijs) Berends 2018-08-02 13:15:45 +02:00
edd2dd09dc rsi for freq dr. M.S. (Matthijs) Berends 2018-08-01 22:37:28 +02:00
d8f70a74de clipboard error dr. M.S. (Matthijs) Berends 2018-08-01 10:32:24 +02:00
a59d0661f7 check CMD error dr. M.S. (Matthijs) Berends 2018-08-01 09:45:11 +02:00
7c667eb732 emph guess_bactid dr. M.S. (Matthijs) Berends 2018-08-01 08:03:31 +02:00
36a5493099 travis update again dr. M.S. (Matthijs) Berends 2018-07-30 01:22:50 +02:00
837dae925d travis update dr. M.S. (Matthijs) Berends 2018-07-30 01:21:37 +02:00
211e3bae14 remove reshape2 dependency dr. M.S. (Matthijs) Berends 2018-07-30 01:18:40 +02:00
510e8f22aa more unit tests dr. M.S. (Matthijs) Berends 2018-07-30 00:57:49 +02:00
d0a115d995 bactid speed improvement dr. M.S. (Matthijs) Berends 2018-07-30 00:14:06 +02:00
826694323b new functions R, RI, SI, S dr. M.S. (Matthijs) Berends 2018-07-29 22:14:51 +02:00
8421e3f005 more mic classes dr. M.S. (Matthijs) Berends 2018-07-28 10:48:27 +02:00
feab1cad6b small fixes dr. M.S. (Matthijs) Berends 2018-07-28 09:34:03 +02:00
498e88b5cf improvement for forecasting resistance dr. M.S. (Matthijs) Berends 2018-07-26 16:30:42 +02:00
d9e204031d update to septic_patients, speed improvements dr. M.S. (Matthijs) Berends 2018-07-25 14:17:04 +02:00
03a3cb397b clipboard update dr. M.S. (Matthijs) Berends 2018-07-23 15:09:19 +02:00
8421638b60 new class bactid dr. M.S. (Matthijs) Berends 2018-07-23 14:14:03 +02:00
40de1b4ac2 man dr. M.S. (Matthijs) Berends 2018-07-23 10:37:49 +02:00
9920ac8a5c fix for keyab, more examples dr. M.S. (Matthijs) Berends 2018-07-23 10:35:39 +02:00
ad662d7bab new col names for key_antibiotics dr. M.S. (Matthijs) Berends 2018-07-19 15:11:23 +02:00
0d64c166f0 keyab fixes dr. M.S. (Matthijs) Berends 2018-07-17 19:51:09 +02:00
2a4d759fbc check fails dr. M.S. (Matthijs) Berends 2018-07-17 14:48:11 +02:00
5cb9c541f8 new algorithm key abs dr. M.S. (Matthijs) Berends 2018-07-17 13:02:05 +02:00
967ee86757 add unit tests dr. M.S. (Matthijs) Berends 2018-07-17 11:18:36 +02:00
a5a4354651 speed improvements dr. M.S. (Matthijs) Berends 2018-07-17 10:32:26 +02:00
715a7630ca support format.freq dr. M.S. (Matthijs) Berends 2018-07-16 16:41:48 +02:00
6eaf33baf3 speed improvements dr. M.S. (Matthijs) Berends 2018-07-15 22:56:41 +02:00
8240959f38 support older mac release dr. M.S. (Matthijs) Berends 2018-07-13 19:40:50 +02:00
b6655f6454 Welcome C++! dr. M.S. (Matthijs) Berends 2018-07-13 17:23:46 +02:00
a28289562a remove print function, out of scope dr. M.S. (Matthijs) Berends 2018-07-11 20:12:19 +02:00
e3e10c2e88 fix for macOS and older tidyr versions dr. M.S. (Matthijs) Berends 2018-07-11 12:34:02 +02:00
eca406b18b travis build fails for macos dr. M.S. (Matthijs) Berends 2018-07-11 11:46:06 +02:00
673ea81c0a libgit2 for macOS dr. M.S. (Matthijs) Berends 2018-07-11 11:04:54 +02:00
330558e0f1 travis update dr. M.S. (Matthijs) Berends 2018-07-11 10:39:47 +02:00
9e40771a17 get travis working again dr. M.S. (Matthijs) Berends 2018-07-10 16:36:30 +02:00
490990c8cb no errors on 3.1 and 3.2 dr. M.S. (Matthijs) Berends 2018-07-10 16:31:13 +02:00
0da1071cd8 latest R version on both linux and macOS dr. M.S. (Matthijs) Berends 2018-07-10 16:17:09 +02:00
f2684b29e7 test R 3.1 to latest dr. M.S. (Matthijs) Berends 2018-07-10 16:05:11 +02:00
cde1892e25 allow failure of covr dr. M.S. (Matthijs) Berends 2018-07-10 15:56:00 +02:00
f63414d519 new g.test, extra unit tests dr. M.S. (Matthijs) Berends 2018-07-10 12:27:07 +02:00
fc30d3fb13 freq: support for table dr. M.S. (Matthijs) Berends 2018-07-09 14:02:58 +02:00
18c91786bf Merge branch 'master' of https://github.com/msberends/AMR dr. M.S. (Matthijs) Berends 2018-07-08 22:15:31 +02:00
14b990d769 kurtosis, skewness, start with ML dr. M.S. (Matthijs) Berends 2018-07-08 22:14:55 +02:00
e4ca66e3ee

support zenodo MS Berends 2018-07-04 23:42:43 +02:00
c768ba0d9c A. lwoffi to A. lwoffii dr. M.S. (Matthijs) Berends 2018-07-04 17:34:23 +02:00
34ee0247ac addins and small improvements to microorganisms dataset dr. M.S. (Matthijs) Berends 2018-07-04 17:20:03 +02:00
10fce8382c include IQR and MAD in freq dr. M.S. (Matthijs) Berends 2018-07-03 11:30:40 +02:00
3d0d21f322 rename vector2ratio to ratio dr. M.S. (Matthijs) Berends 2018-07-02 11:14:20 +02:00
a1acb2f3ac extra unit tests dr. M.S. (Matthijs) Berends 2018-07-02 09:34:20 +02:00
2c8d4cb8bf forgot namespace... dr. M.S. (Matthijs) Berends 2018-07-01 22:37:47 +02:00
2ca01e2d8d remove rlang dependency dr. M.S. (Matthijs) Berends 2018-07-01 22:23:34 +02:00
965fe8681b rlang dep for Travis/macOS dr. M.S. (Matthijs) Berends 2018-07-01 21:50:34 +02:00
3527894b49 new g.test() and edited freq() dr. M.S. (Matthijs) Berends 2018-07-01 21:40:37 +02:00
f7af8a81da update man page dr. M.S. (Matthijs) Berends 2018-06-29 09:06:47 +02:00
6ee713cec1 move tbl_parse_guess dr. M.S. (Matthijs) Berends 2018-06-29 08:56:03 +02:00
4bdcde9a00

allow clipboard on travis MS Berends 2018-06-27 15:56:59 +02:00
649a8025aa add clipboard functions again dr. M.S. (Matthijs) Berends 2018-06-27 15:54:56 +02:00
dab085d7ad

Update README.md MS Berends 2018-06-27 10:44:24 +02:00
a9bd5472d0 top_freq dr. M.S. (Matthijs) Berends 2018-06-20 14:47:37 +02:00
4a027f3c34 extra unit tests, add row.names to freq dr. M.S. (Matthijs) Berends 2018-06-19 15:20:14 +02:00
bdc860e29c atc_groups dr. M.S. (Matthijs) Berends 2018-06-19 10:05:38 +02:00
0a5898b17d fix for printing tibbles, improve guess_bactid dr. M.S. (Matthijs) Berends 2018-06-08 12:06:54 +02:00
efdf5a3dc5 prevent dplyr:row_number warning dr. M.S. (Matthijs) Berends 2018-05-31 14:19:25 +02:00
7a6d5fb6b7

rsi/mic fix MS Berends 2018-05-31 09:02:49 +02:00
5593aee19e edit as.rsi algor. dr. M.S. (Matthijs) Berends 2018-05-30 23:02:16 +02:00
dcc26dd942 Update freq function uscloud 2018-05-22 16:34:22 +02:00
0d80647d41

fix SI and IR MS Berends 2018-05-16 11:19:45 +02:00
af524626b6 Merge branch 'master' of https://github.com/msberends/AMR dr. M.S. (Matthijs) Berends 2018-05-14 11:54:25 +02:00
95f7c78fd6 edit vignette title dr. M.S. (Matthijs) Berends 2018-05-14 11:54:08 +02:00
eecd7a11e8 Set theme jekyll-theme-cayman MS Berends 2018-05-09 11:49:50 +02:00
c690db145e Set theme jekyll-theme-slate MS Berends 2018-05-09 11:48:10 +02:00
f05e7178cb added vignette of freq dr. M.S. (Matthijs) Berends 2018-05-09 11:44:46 +02:00
25b3346d9a edit methodology of rsi v0.2.0 dr. M.S. (Matthijs) Berends 2018-05-03 10:19:02 +02:00
c0fc82c794 Added function n_rsi dr. M.S. (Matthijs) Berends 2018-05-02 14:56:25 +02:00
e5ae7b98ac update logo dr. M.S. (Matthijs) Berends 2018-05-01 09:59:37 +02:00
6eaf594cb7 update data info dr. M.S. (Matthijs) Berends 2018-05-01 09:57:50 +02:00
be5d714639 update README dr. M.S. (Matthijs) Berends 2018-05-01 09:43:47 +02:00
19ccc51f40 remove clipboard functions dr. M.S. (Matthijs) Berends 2018-05-01 09:36:45 +02:00