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python-wrapper

#109

#117

#134

#181

#192

#65

#67

#68

#71

#72

#77

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v0.1.0

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v2.0.0

v2.1.0

v2.1.1

0bc2afafe9 Built site for AMR: 1.8.2.9054@ba51c2d github-actions 2022-11-28 18:48:45 +00:00
ba51c2d92f add column to as.mic() and as.disk() warnings dr. M.S. (Matthijs) Berends 2022-11-28 19:39:52 +01:00
8c6795ca53 Built site for AMR: 1.8.2.9053@31fb81c github-actions 2022-11-24 19:37:19 +00:00
31fb81c382 revised as.rsi(), fix for mdro() dr. M.S. (Matthijs) Berends 2022-11-24 20:29:00 +01:00
a994768452 Built site for AMR: 1.8.2.9052@05d536e github-actions 2022-11-17 14:32:57 +00:00
05d536ebb7 complexes dr. M.S. (Matthijs) Berends 2022-11-17 15:23:29 +01:00
4b476d056c Built site for AMR: 1.8.2.9051@f6862a1 github-actions 2022-11-14 14:27:45 +00:00
f6862a139d expert rules 12.0 dr. M.S. (Matthijs) Berends 2022-11-14 15:20:39 +01:00
eb998f6989 Built site for AMR: 1.8.2.9050@7ca44fb github-actions 2022-11-13 12:52:01 +00:00
7ca44fb756 cleanup and new intro logo dr. M.S. (Matthijs) Berends 2022-11-13 13:44:25 +01:00
bdc43910ae Built site for AMR: 1.8.2.9049@496c08d github-actions 2022-11-13 07:54:32 +00:00
496c08d851

Implement extensive support for antiviral agents support (#77) Dr. Matthijs Berends 2022-11-13 08:46:10 +01:00
6fd5ff2a24 Built site for AMR: 1.8.2.9047@d2edcf5 github-actions 2022-11-12 11:17:17 +00:00
d2edcf51ad

Update website.yaml Dr. Matthijs Berends 2022-11-12 12:10:33 +01:00
68a0b3f94a Built site for AMR: 1.8.2.9047@8d1679b github-actions 2022-11-12 08:52:06 +00:00
8d1679bab3 website update dr. M.S. (Matthijs) Berends 2022-11-12 09:44:36 +01:00
d31b599825 Built site for AMR: 1.8.2.9046@af205e2 github-actions 2022-11-10 21:16:02 +00:00
af205e2705 update collabs dr. M.S. (Matthijs) Berends 2022-11-10 22:07:35 +01:00
7fe29a8401 Built site for AMR: 1.8.2.9045@d2ceebe github-actions 2022-11-07 17:57:12 +00:00
d2ceebe376 website fix dr. M.S. (Matthijs) Berends 2022-11-07 18:48:12 +01:00
f74da6c86a Built site for AMR: 1.8.2.9044@2d90218 github-actions 2022-11-05 11:15:23 +00:00
2d90218305 documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 12:06:40 +01:00
863a83ee08 Built site for AMR: 1.8.2.9043@8dc94a9 github-actions 2022-11-05 08:39:06 +00:00
8dc94a9eda documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 09:31:19 +01:00
b248bcc62a Built site for AMR: 1.8.2.9042@3b65298 github-actions 2022-11-05 07:26:59 +00:00
3b652983b7 documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 08:18:06 +01:00
40b8ed3a1a Built site for AMR: 1.8.2.9041@d20caae github-actions 2022-10-31 12:32:32 +00:00
d20caae54b cleanup dr. M.S. (Matthijs) Berends 2022-10-31 13:25:41 +01:00
90b951a48a Built site for AMR: 1.8.2.9040@796b972 github-actions 2022-10-31 10:28:18 +00:00
796b972f8a extend vctrs support dr. M.S. (Matthijs) Berends 2022-10-31 11:19:06 +01:00
05ea686a1e Built site for AMR: 1.8.2.9039@9444ed6 github-actions 2022-10-30 20:14:42 +00:00
9444ed6d1d fix antibiotics error dr. M.S. (Matthijs) Berends 2022-10-30 21:05:46 +01:00
ec6f7db383 Built site for AMR: 1.8.2.9038@d40e0ef github-actions 2022-10-30 13:40:31 +00:00
d40e0ef20b completely updated antibiotics dr. M.S. (Matthijs) Berends 2022-10-30 14:31:45 +01:00
0d936e8905 Built site for AMR: 1.8.2.9037@3d9faf8 github-actions 2022-10-29 17:07:26 +00:00
3d9faf89cf ATC and DDD update dr. M.S. (Matthijs) Berends 2022-10-29 19:01:23 +02:00
fa620f8ebd fix export of lists in antibiotics and antivirals dr. M.S. (Matthijs) Berends 2022-10-29 16:17:48 +02:00
f988c3273a Built site for AMR: 1.8.2.9035@afdc48d github-actions 2022-10-29 14:16:17 +00:00
afdc48db1e fix txt export of microorganisms dr. M.S. (Matthijs) Berends 2022-10-29 16:08:18 +02:00
9a91fdfb99 Built site for AMR: 1.8.2.9034@6ad7857 github-actions 2022-10-29 12:24:08 +00:00
6ad7857d39 fix missing R breakpoints dr. M.S. (Matthijs) Berends 2022-10-29 14:15:23 +02:00
8438e68df5 Built site for AMR: 1.8.2.9033@c2801ba github-actions 2022-10-22 20:10:04 +00:00
c2801ba7a1 new rsi_translation dr. M.S. (Matthijs) Berends 2022-10-22 22:00:15 +02:00
8211647fb0 Built site for AMR: 1.8.2.9032@d10651e github-actions 2022-10-22 08:25:54 +00:00
d10651eb26 cleanup dr. M.S. (Matthijs) Berends 2022-10-22 10:20:09 +02:00
560396124f Built site for AMR: 1.8.2.9031@d0b54f6 github-actions 2022-10-21 20:03:48 +00:00
d0b54f640c Update contributors list dr. M.S. (Matthijs) Berends 2022-10-21 21:56:54 +02:00
bfca21bd3f precommit update dr. M.S. (Matthijs) Berends 2022-10-21 19:31:46 +02:00
b45431b86c Built site for AMR: 1.8.2.9029@faca6d6 github-actions 2022-10-21 14:31:02 +00:00
faca6d608a mean AMR distance dr. M.S. (Matthijs) Berends 2022-10-21 16:02:14 +02:00
178ab5e5ff mean AMR distance dr. M.S. (Matthijs) Berends 2022-10-21 15:59:31 +02:00
9667f42d3b Built site for AMR: 1.8.2.9027@4bebba3 github-actions 2022-10-21 13:19:49 +00:00
4bebba3610 fix for scoped dplyr verbs dr. M.S. (Matthijs) Berends 2022-10-21 15:13:19 +02:00
49a3324340 Built site for AMR: 1.8.2.9024@3102beb github-actions 2022-10-21 08:06:38 +00:00
3102beb241

Update check-release.yaml Dr. Matthijs Berends 2022-10-21 09:59:09 +02:00
ca3fb70197 Built site for AMR: 1.8.2.9024@74bcc41 github-actions 2022-10-20 17:46:07 +00:00
74bcc41558

Move older test versions to Windows Dr. Matthijs Berends 2022-10-20 19:39:25 +02:00
f137d1a9e0 Built site for AMR: 1.8.2.9024@aa2c063 github-actions 2022-10-20 14:14:41 +00:00
aa2c0639d0 add confidence intervals (fixed #70), remove combine_IR dr. M.S. (Matthijs) Berends 2022-10-20 16:08:01 +02:00
e2e3fa9184 Built site for AMR: 1.8.2.9023@85e2fbe github-actions 2022-10-19 09:58:58 +00:00
85e2fbe4a3 remove warnings from unit tests dr. M.S. (Matthijs) Berends 2022-10-19 11:47:57 +02:00
205bfb053c Built site for AMR: 1.8.2.9022@fed3b64 github-actions 2022-10-19 06:37:08 +00:00
fed3b6440f

Unit test fix Dr. Matthijs Berends 2022-10-19 08:14:38 +02:00
553d074b96 Built site for AMR: 1.8.2.9021@f203928 github-actions 2022-10-19 05:06:14 +00:00
f203928f7e coercion fixes dr. M.S. (Matthijs) Berends 2022-10-19 06:59:36 +02:00
3fc39198d0 unit test fix dr. M.S. (Matthijs) Berends 2022-10-18 23:03:16 +02:00
4cc1967eab Built site for AMR: 1.8.2.9019@e5e6d22 github-actions 2022-10-18 21:02:05 +00:00
e5e6d2200d fix add manual ab dr. M.S. (Matthijs) Berends 2022-10-18 22:53:38 +02:00
491cd94189 Built site for AMR: 1.8.2.9018@ad68b50 github-actions 2022-10-15 13:28:27 +00:00
ad68b50ecd custom ab fix dr. M.S. (Matthijs) Berends 2022-10-15 15:20:13 +02:00
976d5292c7 Built site for AMR: 1.8.2.9016@85ed7ea github-actions 2022-10-14 13:52:23 +00:00
85ed7ea5f0

more robust install check Dr. Matthijs Berends 2022-10-14 15:45:20 +02:00
1a10d0f4ee Built site for AMR: 1.8.2.9016@76bcd35 github-actions 2022-10-14 11:08:40 +00:00
76bcd3528c move object assignment to AMR_env dr. M.S. (Matthijs) Berends 2022-10-14 13:02:50 +02:00
a1d8ec7d4a Built site for AMR: 1.8.2.9014@dfae4c7 github-actions 2022-10-11 09:00:04 +00:00
dfae4c7e7d fast-forward from pull dr. M.S. (Matthijs) Berends 2022-10-11 10:53:51 +02:00
33227a5d90 support ab selectors for manual AB codes dr. M.S. (Matthijs) Berends 2022-10-11 10:49:55 +02:00
4f02b97c70 Built site for AMR: 1.8.2.9013@57d66cd github-actions 2022-10-10 19:46:42 +00:00
57d66cd9d0 doc fix dr. M.S. (Matthijs) Berends 2022-10-10 21:38:39 +02:00
fee4bb45b1 Built site for AMR: 1.8.2.9012@955f9d7 github-actions 2022-10-10 19:11:21 +00:00
955f9d7020 documentation fix dr. M.S. (Matthijs) Berends 2022-10-10 21:03:39 +02:00
2d869c2796 Built site for AMR: 1.8.2.9011@3deeedc github-actions 2022-10-10 18:27:14 +00:00
3deeedc4b6 website fix dr. M.S. (Matthijs) Berends 2022-10-10 20:21:41 +02:00
82e3198315 add add_custom_antimicrobials() dr. M.S. (Matthijs) Berends 2022-10-10 20:20:39 +02:00
4fe90092c7 fix for NA in as.ab() dr. M.S. (Matthijs) Berends 2022-10-10 15:44:59 +02:00
d2ff8027d1 Built site for AMR: 1.8.2.9008@43c638d github-actions 2022-10-10 08:18:00 +00:00
43c638d122 add mo_current() dr. M.S. (Matthijs) Berends 2022-10-10 10:12:08 +02:00
cfc4fd0c0c Built site for AMR: 1.8.2.9007@b753b84 github-actions 2022-10-06 10:25:44 +00:00
b753b84128 fix for mo type translation dr. M.S. (Matthijs) Berends 2022-10-06 12:11:51 +02:00
f3f4586286 Built site for AMR: 1.8.2.9006@b9342d1 github-actions 2022-10-06 09:41:21 +00:00
b9342d103e fix documentation dr. M.S. (Matthijs) Berends 2022-10-06 11:33:30 +02:00
3f99e4a668 Built site for AMR: 1.8.2.9004@0d8b098 github-actions 2022-10-05 10:32:07 +00:00
0d8b098220

Vignette fix Dr. Matthijs Berends 2022-10-05 12:26:50 +02:00
369e7545da and yet another website fix dr. M.S. (Matthijs) Berends 2022-10-05 10:17:53 +02:00
bc44da0e38 website fix dr. M.S. (Matthijs) Berends 2022-10-05 10:07:27 +02:00
def9fc0d75 fix website dr. M.S. (Matthijs) Berends 2022-10-05 09:33:21 +02:00
cd2acc4a29

New mo algorithm, prepare for 2.0 Dr. Matthijs Berends 2022-10-05 09:12:22 +02:00
97c789d01f Built site for AMR: 1.8.1.9049@63fe160 github-actions 2022-09-01 13:38:26 +00:00
63fe160322 new rsi_interpretation_history v1.8.2 dr. M.S. (Matthijs) Berends 2022-09-01 15:20:57 +02:00
ac481f348b Built site for AMR: 1.8.1.9047@a3b97a1 github-actions 2022-08-30 20:22:19 +00:00