AMR/man
dr. M.S. (Matthijs) Berends af74e1d4f2 (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
..
figures website update 2022-12-11 11:44:29 +01:00
AMR-options.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
AMR.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
WHOCC.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
WHONET.Rd fix for `antibiogram()`, transform `WHONET` data set to `sir` 2023-02-22 15:40:05 +01:00
ab_from_text.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
ab_property.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
add_custom_antimicrobials.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
add_custom_microorganisms.Rd unit testing R4.3 2023-05-26 20:37:00 +02:00
age.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
age_groups.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
antibiogram.Rd add oxygen tolerance 2023-05-11 21:56:27 +02:00
antibiotic_class_selectors.Rd (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
antibiotics.Rd (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
as.ab.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
as.av.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
as.disk.Rd documentation, unit tests 2023-01-24 10:20:27 +01:00
as.mic.Rd rename `limit_mic_range()` to `rescale_mic()` 2024-05-24 15:07:41 +02:00
as.mo.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
as.sir.Rd fix SIR interpretation for uti 2024-05-31 21:24:35 +02:00
atc_online.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
av_from_text.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
av_property.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
availability.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
bug_drug_combinations.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
clinical_breakpoints.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
count.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
custom_eucast_rules.Rd (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
dosage.Rd Update clinical breakpoints and fix some `as.mo()` bugs (#117) 2023-06-22 15:10:59 +02:00
eucast_rules.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
example_isolates.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
example_isolates_unclean.Rd bring back `antibiogram()`, without deps 2023-02-10 16:18:00 +01:00
export_biosample.Rd fix unit test 2024-06-04 20:17:54 +02:00
first_isolate.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
g.test.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
get_episode.Rd update NEWS 2023-03-11 14:43:31 +01:00
ggplot_pca.Rd Remove RSI from package, add extra MIC scale functions 2023-12-03 11:34:48 +01:00
ggplot_sir.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
guess_ab_col.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
intrinsic_resistant.Rd reftbl in plots, speedup for as.sir() and mo_validate 2023-07-10 16:43:46 +02:00
italicise_taxonomy.Rd Added support for 'html' in italicize_taxonomy() (#134) 2024-02-13 13:47:07 +01:00
join.Rd documentation, unit tests 2023-01-24 10:20:27 +01:00
key_antimicrobials.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
kurtosis.Rd documentation, unit tests 2023-01-24 10:20:27 +01:00
like.Rd fix documentation 2023-03-16 08:55:37 +01:00
mdro.Rd new Norwegian link 2024-03-03 23:24:57 +01:00
mean_amr_distance.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
microorganisms.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
microorganisms.codes.Rd indicate unique identifiers 2023-07-12 21:26:32 +02:00
microorganisms.groups.Rd Added C. freundii complex and Y. pseudotuberculosis complex 2023-07-14 10:49:06 +02:00
mo_matching_score.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
mo_property.Rd new `mo_group_members()` 2024-04-19 10:18:21 +02:00
mo_source.Rd make `rsi` work in more cases, documentation update 2023-02-22 14:38:57 +01:00
pca.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
plot.Rd support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
proportion.Rd new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
random.Rd Update clinical breakpoints and fix some `as.mo()` bugs (#117) 2023-06-22 15:10:59 +02:00
resistance_predict.Rd breakpoints UTI interpretation fix 2023-07-10 13:41:52 +02:00
skewness.Rd documentation, unit tests 2023-01-24 10:20:27 +01:00
translate.Rd prepare for CRAN 2023-10-20 14:51:48 +02:00