NuMRI/input/PostCheck_input.yaml

123 lines
4.3 KiB
YAML
Executable File

#################################################
#
# Input file for the checkpoint postprocessing
#
#################################################
Algebra:
apply: false
mode: '+'
VENC: 97
outname: 'ucor'
outpath: '/home/yeye/Desktop/Corrector_2019/Perturbation/gain/SNR10V60/'
checkpoint: true
#meshpath: '/home/yeye/Desktop/Poiseuille/Meas_leo/poiseuille.h5'
meshpath: '/home/yeye/Desktop/Corrector_2019/Meshes/leoH3_2.0.h5'
v1:
name: 'u'
path: '/home/yeye/Desktop/Corrector_2019/Perturbation/Meas/SNR10V60/'
v2:
name: 'w_COR_impl_stan'
path: '/home/yeye/Desktop/Corrector_2019/Perturbation/COR/SNR10V60/'
Colormap:
apply: false
#mode: ['u','w','w/u','div(u)','div(u)/u']
mode: ['dot']
outpath: '/home/yeye/Desktop/Poiseuille/H5/leo2mm/SNRinfV80/'
meshpath: '/home/yeye/Desktop/Poiseuille/Meas_leo/poiseuille.h5'
upath: '/home/yeye/Desktop/Poiseuille/Meas_leo/SNRinfV80/'
wpath: '/home/yeye/Desktop/Poiseuille/Corrector/leo2mm/SNRinfV80/'
uname: 'u'
wname: 'w_COR_impl_stan'
Velocity:
apply: false
meshpath: '/home/yeye/Desktop/Corrector_2019/Poiseuille/poiseuille.h5'
checkpoint: '/home/yeye/Desktop/Corrector_2019/Poiseuille/COR/SNR15V120/'
undersampling: 1
dt: 0.03
filename: 'w_COR_impl_stan'
Estim_Pressure:
apply: false
meshpath: '/home/yeye/Desktop/Corrector_2019/Meshes/9mmRest2.0.h5'
filename: 'p_COR_impl_stan'
checkpath: '/home/yeye/Desktop/Corrector_2019/AoCo/9mm_pspg/'
method: spheres # slices, boundaries, spheres
dt: 0.03072
boundaries: [2,3]
spheres:
- center: [0.0980092, 0.0909768, 0.0802258] # 9mm
#- center: [0.110266, 0.086805, 0.0794744] # 11mm
#- center : [0.0940797, 0.0766444, 0.080433] #13mm
#- center: [0.0870168, 0.0901715, 0.0883529] # Normal
radius: 0.005
Npts: 32
- center: [0.0980092, 0.135047, 0.0252659] # 9mm
#- center: [0.110266, 0.133002, 0.0263899] # 11mm
#- center : [0.0940573, 0.123321, 0.0260755] # 13 mm
#- center: [0.0869949, 0.12838, 0.0269889] # Normal
radius: 0.005
Npts: 32
Outlet_Wind:
apply: false
mesh_path: '/home/yeye/Desktop/aorta/mesh/aorta_coarse_marked.h5'
checkpoint: '/home/yeye/Desktop/aorta/results/mono/'
filename: ['u','p']
bnds: [3,4,5,6]
out_path: '/home/yeye/Desktop/aorta/results/mono/'
Error-curves:
apply: true
dt: 0.03
VENC: 204 #194/129/113/97 for aorta(120,80,70,60)/ 204/136
type: ['utrue-uobs']
#type: ['l2_comp','div']
meshpath: '/home/yeye/Desktop/Poiseuille/Meas_leo/poiseuille.h5'
#meshpath: '/home/yeye/Desktop/Corrector_2019/Meshes/leoH3_2.0.h5'
true_check: '/home/yeye/Desktop/Poiseuille/Meas_leo/SNRinfV120/'
true_name: 'u'
ref_check: '/home/yeye/Desktop/Poiseuille/Meas_leo/SNR10V120/'
ref_name: 'u'
undersampling: 1
com_check: '/home/yeye/Desktop/Poiseuille/Corrector/leo2mm/SNR10V120/'
com_name: 'w_COR_impl_stan'
outpath: '/home/yeye/Desktop/Poiseuille/curves/SNR10V120/'
Histograms:
apply: false
type: ['normal','grad']
meshpath: '/home/yeye/Desktop/Corrector_2019/meshes/11AoCoPhantomRest1.4.h5'
checkpath: '/home/yeye/Desktop/Corrector_2019/I/corrector/11mmRest1.4/'
field_name: 'w_COR_impl_stan'
outpath: '/home/yeye/Desktop/Corrector_2019/I/corrector/11mmRest1.4/'
Temporal-Average:
apply: false
meshpath: '/home/yeye/Desktop/PhD/AORTA/MESH/coaorta/H1/coaortaH1.h5'
original_check: '/home/yeye/Desktop/First/H1/dt5ms/coaorta/'
xdmf: false
dt: 0.005
subsampling_rate: 6
out_check: '/home/yeye/Desktop/First/H1/test/'
Temporal-Interpolation:
apply: false
meshpath: '/home/yeye/Desktop/Corrector_2019/meshes/11AoCoPhantomRest1.4.h5'
original_check: '/home/yeye/Desktop/Corrector_2019/I/meas/11mmRest1.4/R1/'
xdmf: true
dt: 0.03072
dt_new: 0.015
out_check: '/home/yeye/Desktop/Corrector_2019/I/meas/11mmRest1.4/dt15ms/'
Perturbation:
apply: false
undersampling: 1
type:
SNR: 10 # dB signal to noise ratio
coil: true
phase_contrast: 80 # venc % respect u max
meshpath: '/home/yeye/Desktop/Poiseuille/Meas_leo/poiseuille.h5'
checkpath: '/home/yeye/Desktop/Poiseuille/Meas_leo/original/'
xdmf: true