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mirror of https://github.com/msberends/AMR.git synced 2024-12-24 18:46:14 +01:00
Commit Graph

112 Commits

Author SHA1 Message Date
0205b6178d guess_mo deprecation 2019-01-06 16:40:55 +01:00
f01d62ee5d language 2019-01-05 21:51:48 +01:00
6b2d464f8c big website update, licence txt update 2019-01-02 23:24:07 +01:00
2e4d703338 eucast rules fix, 1st isolate fix, website update 2018-12-31 01:48:53 +01:00
469b145d8c bye bye packrat 2018-12-30 12:00:53 +01:00
92a32b62a7 new website, freq updates 2018-12-29 22:24:19 +01:00
92d2553dfe gitlab pages 2018-12-23 21:26:21 +01:00
0b8084871d dplyr 0.8.0 support, fixes #7 2018-12-22 22:39:34 +01:00
2018d5b477 age and age_groups 2018-12-15 22:40:07 +01:00
81af7be36e note about portions 2018-12-14 07:23:25 +01:00
9478ab71be freq - decimals 2018-12-10 10:13:40 +01:00
8e8a9cd190 AI improvements 2018-12-07 12:04:55 +01:00
60fe98bbbd better as.mo handling 2018-12-06 14:36:39 +01:00
5cfa5bbfe3 v0.5.0 2018-11-30 16:16:04 +01:00
31e977937d fix for as.mo and freq 2018-11-30 12:05:59 +01:00
9ddf6dc530 support A. species for as.mo, cleanup 2018-11-24 20:25:09 +01:00
a8132922af unit test read.4d, unselecting freq cols 2018-11-19 13:00:22 +01:00
4fcc2b409a MDRO update 2018-11-16 20:50:50 +01:00
fab64e6728 read.4D improvements 2018-11-15 12:42:35 +01:00
6b0f4ffbd4 new kingdom 2018-11-09 13:11:54 +01:00
d07e9b904e new function get_locale 2018-11-05 13:20:32 +01:00
5476fecc73 eucast update 2018-11-01 20:23:33 +01:00
9cd4ab928a speed improvement as.mo, freq title 2018-10-31 12:10:49 +01:00
1bf8dc2983 as.mo speedup: assigned to namespace 2018-10-29 17:26:17 +01:00
87757748bd switch to gitlab 2018-10-23 16:49:40 +02:00
299c5bea43 na freq, removed factors 2018-10-23 09:42:26 +02:00
c2a93b46db breaks param, tidyr dep change, freq markdown 2018-10-22 12:32:59 +02:00
86b03577a7 fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00
693f64bdbf new EUCAST rules: clinical breakpoints 2018-10-17 17:32:34 +02:00
d5a41de711 parameter combine_IR 2018-10-16 09:59:31 +02:00
5b5b95a47b count_all and some fixes 2018-10-12 16:35:18 +02:00
95c9fdc552 CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
2018-10-09 13:53:33 +02:00
c7c57f4042 0.4.0, just published on CRAN 2018-10-01 19:36:42 +02:00
3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
768fe17324 removed clipboard functions as it violated CRAN policies 2018-09-28 16:05:18 +02:00
2b0080995e speed improvement for as.mo, more old taxonomic names 2018-09-27 23:23:48 +02:00
9c566585b0 first inclusion of ITIS data 2018-09-24 23:33:29 +02:00
db14781593 add labels_rsi_count 2018-09-16 22:11:17 +02:00
26f5be0033 support for portuguese, language determination based on system 2018-09-08 16:06:47 +02:00
b388e3fee7 Support for German and Spanish microorganism properties, cleanup 2018-09-04 11:33:30 +02:00
75fe4d401f new MOs, cleanup 2018-09-01 21:19:46 +02:00
5965d3c794 replaced bactid by mo 2018-08-31 13:36:19 +02:00
029157b3be 163 new trade names, added ab_tradenames 2018-08-29 12:27:37 +02:00
972fc4f6c7 ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid 2018-08-28 13:51:13 +02:00
2acdb1981c atc and bactid functions, readme update 2018-08-25 22:01:14 +02:00
a100d07da6 removed ratio, better rsi_calc, update for freq 2018-08-24 11:08:20 +02:00
0c0e538ef4 dependencies 2018-08-23 22:05:17 +02:00
8ab93b6688 unit tests 2018-08-23 01:01:50 +02:00
da5379c881 quasiquotation, alpha for geom_rsi 2018-08-23 00:40:36 +02:00
3e87c8f409 count_* functions 2018-08-22 00:02:26 +02:00