 dr. M.S. (Matthijs) Berends
|
0c3d81f32e
|
(v2.1.1.9059) documentation fix
|
2024-06-17 22:26:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
a4dc37a4e4
|
(v2.1.1.9057) fix for missing breakpoints
|
2024-06-17 16:52:12 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d9e66fb118
|
(v2.1.1.9056) example fix
|
2024-06-17 14:52:18 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
1e65b5a289
|
(v2.1.1.9055) example fix
|
2024-06-17 14:36:40 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
13baf8d7be
|
(v2.1.1.9054) fix examples
|
2024-06-17 13:52:02 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2dee1d71dc
|
(v2.1.1.9053) add `verbose` to `as.sir()`, unit test fix
|
2024-06-17 10:38:45 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bdbf5198a2
|
(v2.1.1.9050) vctrs fix for `sir`, small documentation fixes
|
2024-06-15 15:33:49 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
9bf7584d58
|
(v2.1.1.9049) new 2024 breakpoints, add `AMO`, set NI instead of N
|
2024-06-14 22:39:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
31207952d3
|
(v2.1.1.9043) fix sir translation with as.double
|
2024-06-10 10:34:45 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
a3071cf58b
|
(v2.1.1.9042) update translations and example isolates
|
2024-06-09 11:31:04 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7c1b564648
|
fix SIR interpretation for uti
|
2024-05-31 21:24:35 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c3ce1b551d
|
rename `limit_mic_range()` to `rescale_mic()`
|
2024-05-24 15:07:41 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d214f74e25
|
allow column name for `ab` in `as.sir()`
|
2024-05-20 21:29:13 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
08a27922a8
|
new SDD and N for `as.sir()`
|
2024-05-20 15:27:04 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0039cb05d6
|
update MIC comparisons
|
2024-04-05 16:44:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
7be4dabbc0
|
support veterinary MIC/disk translation
|
2024-02-24 15:16:52 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
0c46f61260
|
MO group fixes
|
2023-07-12 15:04:48 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
a4e2e25e3f
|
reftbl in plots, speedup for as.sir() and mo_validate
|
2023-07-10 16:43:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
70c601ca11
|
breakpoints UTI interpretation fix
|
2023-07-10 13:41:52 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
acb534102b
|
new species groups, updated clinical breakpoints
|
2023-07-08 17:30:05 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
2d97cca6d9
|
fix `reference_df` endless loop
|
2023-06-26 13:52:02 +02:00 |
Dr. Matthijs Berends
|
f065945d7b
|
Update clinical breakpoints and fix some `as.mo()` bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
|
2023-06-22 15:10:59 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
02322ac2ee
|
Fix PK/PD breakpoints
|
2023-04-19 00:31:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ed70f95380
|
Fix clinical breakpoints
|
2023-04-14 23:14:34 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
dad25302f2
|
make `rsi` work in more cases, documentation update
|
2023-02-22 14:38:57 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
68abb00c59
|
add include_screening to `as.sir()`
|
2023-02-12 15:09:54 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
bc434db835
|
bring back `antibiogram()`, without deps
|
2023-02-10 16:18:00 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
70a7ba0206
|
fix first isolate
|
2023-02-10 13:13:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1a0dc4bf46
|
revert back to pre-antibiogram
|
2023-02-09 13:07:39 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
9e99e66f01
|
use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi
|
2023-02-06 11:57:22 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
830c67f1bf
|
documentation, unit tests
|
2023-01-24 10:20:27 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
eef00069fd
|
add all options to documentation
|
2023-01-23 20:07:57 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
19fd0ef121
|
sort sir history
|
2023-01-23 15:01:21 +01:00 |
|
Dr. Matthijs Berends
|
98e62c9af2
|
Replace RSI with SIR
|
2023-01-21 23:47:20 +01:00 |