Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |
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b94bc6c67b
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adding mo fixes
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2023-01-14 19:50:25 +01:00 |
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84ed8c32bb
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documentation
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2023-01-06 19:21:04 +01:00 |
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a0ee86536a
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unit tests
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2023-01-05 14:43:18 +01:00 |
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e4ea96cbf9
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fix for R < 3.4
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2022-12-30 12:57:27 +01:00 |
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f619fb683b
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support new mo codes
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2022-12-27 15:16:15 +01:00 |
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31fb81c382
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revised as.rsi(), fix for mdro()
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2022-11-24 20:29:00 +01:00 |
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f6862a139d
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
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d20caae54b
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cleanup
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2022-10-31 13:25:41 +01:00 |
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9444ed6d1d
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fix antibiotics error
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2022-10-30 21:05:46 +01:00 |
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d40e0ef20b
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
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c2801ba7a1
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new rsi_translation
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2022-10-22 22:00:15 +02:00 |
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4bebba3610
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fix for scoped dplyr verbs
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2022-10-21 15:13:19 +02:00 |
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aa2c0639d0
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add confidence intervals (fixed #70), remove combine_IR
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2022-10-20 16:08:01 +02:00 |
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85e2fbe4a3
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remove warnings from unit tests
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2022-10-19 11:47:57 +02:00 |
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Dr. Matthijs Berends
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85ed7ea5f0
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more robust install check
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2022-10-14 15:45:20 +02:00 |
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76bcd3528c
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move object assignment to AMR_env
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2022-10-14 13:02:50 +02:00 |
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b9342d103e
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fix documentation
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2022-10-06 11:33:30 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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63fe160322
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new rsi_interpretation_history
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2022-09-01 15:20:57 +02:00 |
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c44ddf272f
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fix for R <= 3.3
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2022-08-28 19:34:04 +02:00 |
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4d050aef7c
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
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303d61b473
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new tibble export
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2022-08-27 20:49:37 +02:00 |
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3864ab2fb8
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Feather and Parquet files
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2022-08-26 22:25:15 +02:00 |
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4754848e96
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(v1.8.1.9001) update unit tests, fixes #53
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2022-04-08 11:02:45 +02:00 |
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3b2b2be5f8
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(v1.8.0.9002) as.rsi() cleanup, more informative warnings
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2022-03-02 15:38:55 +01:00 |
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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578e7dfee9
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(v1.7.1.9070) Better WHONET support
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2021-12-13 10:18:28 +01:00 |
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e0a2634f14
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(v1.7.1.9065) unit tests
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2021-12-11 15:13:44 +01:00 |
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77ba4318ea
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(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
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2021-12-11 13:41:31 +01:00 |
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e18c49ed93
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(v1.7.1.9063) not_intrinsic_resistant
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2021-12-09 10:48:25 +01:00 |
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75965124ef
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(v1.7.1.9060) bugfix set_ab_names
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2021-12-05 23:11:10 +01:00 |
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7965468ccd
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(v1.7.1.9058) vars selection for set_ab_names()
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2021-12-05 22:06:45 +01:00 |
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9a2c431e16
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(v1.7.1.9053) fortify() methods
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2021-11-01 13:51:13 +01:00 |
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91149d6d35
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(v1.7.1.9052) eucast-update
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2021-10-06 16:22:36 +02:00 |
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2bcf28281d
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(v1.7.1.9049) unit tests
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2021-10-05 09:58:08 +02:00 |
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bcab74fb6d
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(v1.7.1.9037) dplyr grouping fix on windows?
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2021-08-31 17:06:44 +02:00 |
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986bd826ee
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(v1.7.1.9035) dplyr grouping fix on windows?
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2021-08-30 15:43:12 +02:00 |
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6ca6a3f6df
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(v1.7.1.9032) dplyr grouping fix on windows?
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2021-08-30 14:17:27 +02:00 |
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e6ce25162e
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(v1.7.1.9031) dplyr grouping fix on windows?
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2021-08-30 14:07:46 +02:00 |
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a44283f998
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(v1.7.1.9024) unit tests
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2021-08-17 14:34:11 +02:00 |
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a2d249962f
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(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
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2021-08-16 21:54:34 +02:00 |
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4e1efd902c
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(v1.7.1.9022) rely on vctrs for ab selectors
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2021-07-23 21:42:11 +02:00 |
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fc946564d1
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(v1.7.1.9019) Morganella MIC in EUCAST 2021
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2021-07-12 12:28:41 +02:00 |
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3e26929838
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(v1.7.1.9009) fix for ab class selectors
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2021-07-03 21:56:53 +02:00 |
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d04e83f494
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(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
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2021-06-22 12:16:42 +02:00 |
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556bf0014d
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(v1.7.1.9003) unit test
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2021-06-14 22:37:05 +02:00 |
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1908e7cc7a
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(v1.7.1.9000) ab_class update, unit tests
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2021-06-04 21:07:55 +02:00 |
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f406319503
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(v1.7.0.9000) package size
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2021-05-30 22:14:38 +02:00 |
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ac73a8d849
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v1.7.0
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2021-05-24 15:29:17 +02:00 |
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e5599bc694
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(v1.6.0.9065) unit tests
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2021-05-24 11:01:32 +02:00 |
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4fbf9e1720
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(v1.6.0.9064) prepare new release
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2021-05-24 09:34:08 +02:00 |
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06302d296a
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(v1.6.0.9062) code consistency
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2021-05-24 00:06:28 +02:00 |
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b210f1327c
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(v1.6.0.9055) support codecov again
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2021-05-21 20:20:51 +02:00 |
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4a2a48b7c1
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(v1.6.0.9052) unit tests
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2021-05-20 11:42:39 +02:00 |
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9a2879cba9
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(v1.6.0.9049) unit tests
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2021-05-20 00:07:27 +02:00 |
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2413efd5c1
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(v1.6.0.9048) ab selectors overhaul
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2021-05-19 22:55:42 +02:00 |
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6920c0be41
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(v1.6.0.9047) filter_ab_class() fixes
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2021-05-18 11:29:31 +02:00 |
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cfb7df823e
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(v1.6.0.9044) betalactams() selector
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2021-05-18 00:53:04 +02:00 |
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29dbfa2f49
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(v1.6.0.9021) join functions update
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2021-05-12 18:15:03 +02:00 |
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0aca719929
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(v1.6.0.9018) unit tests
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2021-05-04 15:20:43 +02:00 |
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5679ccdaf9
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(v1.6.0.9017) extra system codes
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2021-05-04 12:47:33 +02:00 |
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f33e61bac7
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(v1.6.0.9016) website update and c() fixes
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2021-05-03 13:06:43 +02:00 |
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93683a4ae2
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(v1.6.0.9010) big first_isolate() update
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2021-04-26 23:57:37 +02:00 |
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70b803dbb6
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(v1.6.0.9008) unlike, bugfix for col_mo naming
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2021-04-23 09:59:36 +02:00 |
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c6289c3fc3
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(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
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2021-04-20 10:46:17 +02:00 |
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24ac18a99d
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(v1.6.0.9005) unit test fix
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2021-04-16 13:24:59 +02:00 |
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9842ef9660
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(v1.6.0.9004) unit test fix
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2021-04-16 12:02:57 +02:00 |
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00d3e437a8
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(v1.6.0.9003) like() fix
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2021-04-16 11:41:05 +02:00 |
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d277d58475
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(v1.6.0.9002) R-3.0 installation fix
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2021-04-12 14:24:40 +02:00 |
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6ff5448192
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(v1.6.0.9001) support Inf for episodes
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2021-04-12 12:35:13 +02:00 |
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7a3139f7cc
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(v1.6.0.9000) custom EUCAST rules
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2021-04-07 08:37:42 +02:00 |
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8d6ceb6a15
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(v1.5.0.9040) removal of isolate_identifier
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2021-03-08 09:44:17 +01:00 |
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850c123de7
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(v1.5.0.9032) All group generics for MICs
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2021-03-07 13:52:39 +01:00 |
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a673407904
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(v1.5.0.9025) big plot and ggplot generics update
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2021-02-25 10:33:08 +01:00 |
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062c49fca1
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(v1.5.0.9022) mo properties speed improvement
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2021-02-21 22:56:35 +01:00 |
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5ef8cb41a7
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(v1.5.0.9021) improve speed of %like%
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2021-02-21 20:15:09 +01:00 |
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
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2021-02-17 10:58:13 +01:00 |
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cb404492b2
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(v1.5.0.9017) unit testing
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2021-02-08 21:09:36 +01:00 |
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4a84894f79
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(v1.5.0.9016) only_rsi_columns update, documentation
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2021-02-08 14:18:42 +01:00 |
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8fda473e49
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(v1.5.0.9015) unit test fix, grouped first isolates
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2021-02-04 16:48:16 +01:00 |
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
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2021-02-02 23:57:35 +01:00 |
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20d638c193
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(v1.5.0.9013) updated tibble printing colours
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2021-01-28 16:09:30 +01:00 |
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331c1f6508
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(v1.5.0.9012) ampc_cephalosporin_resistance for I
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2021-01-25 21:58:00 +01:00 |
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286eaa9699
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(v1.5.0.9010) MDRO vignette update, get_episode for < day
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2021-01-24 14:48:56 +01:00 |
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1a88caa119
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(v1.5.0.9009) unit test fixes
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2021-01-22 10:55:07 +01:00 |
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1ba44776a1
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(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
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2021-01-22 10:20:41 +01:00 |
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4eab095306
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(v1.5.0.9006) major documentation update
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2021-01-18 16:57:56 +01:00 |
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bc00470dca
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(v1.5.0.9001) more informative argument errors
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2021-01-14 14:41:44 +01:00 |
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d014955ce0
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
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2021-01-12 22:08:04 +01:00 |
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8d117820b8
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(v1.4.0.9060) ab class selector fix
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2021-01-04 13:39:06 +01:00 |
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c9de74c81a
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(v1.4.0.9059) ab class selector fix
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2021-01-04 12:29:25 +01:00 |
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63a4dda467
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(v1.4.0.9056) subsetting ab class selectors for base R
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2021-01-03 23:40:05 +01:00 |
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526f8afb08
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(v1.4.0.9052) replaced all sapply's with type-safe vapply's
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2020-12-28 22:24:33 +01:00 |
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8b52f9b1be
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(v1.4.0.9047) unit tests
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2020-12-27 00:30:28 +01:00 |
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acbd0cf7ca
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(v1.4.0.9046) get_episode
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2020-12-27 00:07:00 +01:00 |
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291f802be3
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(v1.4.0.9045) unit tests
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2020-12-25 00:06:11 +01:00 |
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df37584189
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(v1.4.0.9044) mo tibble printing, mo_shortname() fix
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2020-12-24 23:29:10 +01:00 |
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128ebcfd62
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(v1.4.0.9043) documentation update
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2020-12-22 00:51:17 +01:00 |
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ee70883246
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(v1.4.0.9042) auto dark theme website
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2020-12-21 22:46:29 +01:00 |
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