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mirror of https://github.com/msberends/AMR.git synced 2024-12-26 16:06:11 +01:00
Commit Graph

34 Commits

Author SHA1 Message Date
0488d00f20 (v2.1.1.9111) add betalactams_with_inhibitor(), fixes #175 2024-12-06 15:44:20 +01:00
ac1c40d8bb (v2.1.1.9081) HUGE microorganisms update for fungi! 2024-09-29 22:17:56 +02:00
640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
9bf7584d58 (v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N 2024-06-14 22:39:01 +02:00
de17de1be9 (v2.1.1.9048) vctrs update for sir 2024-06-13 20:55:17 +02:00
af74e1d4f2 (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
60c6c21e45 fix SIR interpretation 2024-05-31 09:50:54 +02:00
91fa73dedf add oxygen tolerance 2023-05-11 21:56:27 +02:00
dad25302f2 make rsi work in more cases, documentation update 2023-02-22 14:38:57 +01:00
830c67f1bf documentation, unit tests 2023-01-24 10:20:27 +01:00
Dr. Matthijs Berends
98e62c9af2
Replace RSI with SIR 2023-01-21 23:47:20 +01:00
593d740b84 documentation, file permissions 2023-01-19 12:54:53 +01:00
a98d0d75ea styler dep 2023-01-05 14:46:44 +01:00
7ca44fb756 cleanup and new intro logo 2022-11-13 13:44:25 +01:00
d40e0ef20b completely updated antibiotics 2022-10-30 14:31:45 +01:00
Dr. Matthijs Berends
cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
63fe160322 new rsi_interpretation_history 2022-09-01 15:20:57 +02:00
4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
303d61b473 new tibble export 2022-08-27 20:49:37 +02:00
952d16de33 new, automated website 2022-08-21 16:37:20 +02:00
b84d647cac (v1.8.1.9012) update prevalence of some genera 2022-06-03 13:28:55 +02:00
1b84564d36 (v1.8.1.9011) update prevalence of some genera 2022-06-03 12:43:25 +02:00
08d387b5ce (v1.8.0.9005) as.rsi() fix 2022-03-10 19:33:25 +01:00
18e8525d10 (v1.8.0.9001) as.mo improvement, fixes #52 2022-02-26 21:58:23 +01:00
578e7dfee9 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
7965468ccd (v1.7.1.9058) vars selection for set_ab_names() 2021-12-05 22:06:45 +01:00
694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
95050ee3e0 (v1.7.1.9007) Updated antibiotics dataset, fixes #41 2021-06-23 10:03:17 +02:00
1908e7cc7a (v1.7.1.9000) ab_class update, unit tests 2021-06-04 21:07:55 +02:00
bef0f42f66 (v1.7.0.9001) CLSI 2020 guideline 2021-06-01 15:33:06 +02:00
12a8d59869 (v1.6.0.9015) italicise_taxonomy 2021-05-03 10:47:32 +02:00
c6289c3fc3 (v1.6.0.9007) documentation custom eucast rules, progress bar as.mo 2021-04-20 10:46:17 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules 2021-04-07 08:37:42 +02:00