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640888f408
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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68f7795481
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(v2.1.1.9052) unit test fix
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2024-06-16 20:53:50 +02:00 |
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bdbf5198a2
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(v2.1.1.9050) vctrs fix for sir, small documentation fixes
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2024-06-15 15:33:49 +02:00 |
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9bf7584d58
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(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
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2024-06-14 22:39:01 +02:00 |
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af74e1d4f2
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(v2.1.1.9041) antibiotics update
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2024-06-08 17:35:25 +02:00 |
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08a27922a8
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new SDD and N for as.sir()
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2024-05-20 15:27:04 +02:00 |
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0d8a91db49
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rename pre-commit hook to pre-commit checks (no-check)
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2024-04-23 10:55:48 +02:00 |
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7be4dabbc0
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support veterinary MIC/disk translation
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2024-02-24 15:16:52 +01:00 |
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c7461766ce
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Remove RSI from package, add extra MIC scale functions
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2023-12-03 11:34:48 +01:00 |
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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Dr. Matthijs Berends
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f065945d7b
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Update clinical breakpoints and fix some as.mo() bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
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2023-06-22 15:10:59 +02:00 |
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9591688811
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documentation update
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2023-05-27 10:39:22 +02:00 |
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80cfc503c2
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check for 2.0
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2023-03-12 13:02:37 +01:00 |
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7ad8635994
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documentation for 'data.table' AB selectors
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2023-03-11 16:54:02 +01:00 |
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262598b8d7
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support for old rsi arguments
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2023-03-11 14:24:34 +01:00 |
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dad25302f2
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make rsi work in more cases, documentation update
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2023-02-22 14:38:57 +01:00 |
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1a0dc4bf46
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revert back to pre-antibiogram
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2023-02-09 13:07:39 +01:00 |
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822e9de82c
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pm update, unit test fix?
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2023-02-08 13:48:06 +01:00 |
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9e99e66f01
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use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
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2023-02-06 11:57:22 +01:00 |
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19fd0ef121
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sort sir history
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2023-01-23 15:01:21 +01:00 |
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Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |
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593d740b84
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documentation, file permissions
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2023-01-19 12:54:53 +01:00 |
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f619fb683b
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support new mo codes
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2022-12-27 15:16:15 +01:00 |
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f6862a139d
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expert rules 12.0
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2022-11-14 15:20:39 +01:00 |
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7ca44fb756
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cleanup and new intro logo
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2022-11-13 13:44:25 +01:00 |
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d40e0ef20b
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
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85e2fbe4a3
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remove warnings from unit tests
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2022-10-19 11:47:57 +02:00 |
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76bcd3528c
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move object assignment to AMR_env
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2022-10-14 13:02:50 +02:00 |
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33227a5d90
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support ab selectors for manual AB codes
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2022-10-11 10:49:55 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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4d050aef7c
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
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303d61b473
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new tibble export
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2022-08-27 20:49:37 +02:00 |
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3864ab2fb8
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Feather and Parquet files
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2022-08-26 22:25:15 +02:00 |
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952d16de33
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new, automated website
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2022-08-21 16:37:20 +02:00 |
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3b2b2be5f8
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(v1.8.0.9002) as.rsi() cleanup, more informative warnings
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2022-03-02 15:38:55 +01:00 |
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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578e7dfee9
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(v1.7.1.9070) Better WHONET support
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2021-12-13 10:18:28 +01:00 |
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77ba4318ea
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(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
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2021-12-11 13:41:31 +01:00 |
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e18c49ed93
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(v1.7.1.9063) not_intrinsic_resistant
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2021-12-09 10:48:25 +01:00 |
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