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mirror of https://github.com/msberends/AMR.git synced 2024-12-27 06:06:12 +01:00
Commit Graph

88 Commits

Author SHA1 Message Date
ae2433a020 rsi family for resistance analysis 2018-08-03 14:49:29 +02:00
826694323b new functions R, RI, SI, S 2018-07-29 22:14:51 +02:00
feab1cad6b small fixes 2018-07-28 09:34:03 +02:00
498e88b5cf improvement for forecasting resistance 2018-07-26 16:30:42 +02:00
d9e204031d update to septic_patients, speed improvements 2018-07-25 14:17:04 +02:00
8421638b60 new class bactid 2018-07-23 14:14:03 +02:00
5cb9c541f8 new algorithm key abs 2018-07-17 13:02:05 +02:00
a5a4354651 speed improvements 2018-07-17 10:32:26 +02:00
715a7630ca support format.freq 2018-07-16 16:41:48 +02:00
b6655f6454 Welcome C++! 2018-07-13 17:23:46 +02:00
a28289562a remove print function, out of scope 2018-07-11 20:12:19 +02:00
f63414d519 new g.test, extra unit tests 2018-07-10 12:27:07 +02:00
fc30d3fb13 freq: support for table 2018-07-09 14:02:58 +02:00
14b990d769 kurtosis, skewness, start with ML 2018-07-08 22:14:55 +02:00
34ee0247ac addins and small improvements to microorganisms dataset 2018-07-04 17:20:03 +02:00
10fce8382c include IQR and MAD in freq 2018-07-03 11:30:40 +02:00
3d0d21f322 rename vector2ratio to ratio 2018-07-02 11:14:20 +02:00
2c8d4cb8bf forgot namespace... 2018-07-01 22:37:47 +02:00
3527894b49 new g.test() and edited freq() 2018-07-01 21:40:37 +02:00
649a8025aa add clipboard functions again 2018-06-27 15:54:56 +02:00
a9bd5472d0 top_freq 2018-06-20 14:47:37 +02:00
bdc860e29c atc_groups 2018-06-19 10:05:38 +02:00
uscloud
dcc26dd942 Update freq function 2018-05-22 16:34:22 +02:00
c0fc82c794 Added function n_rsi 2018-05-02 14:56:25 +02:00
19ccc51f40 remove clipboard functions 2018-05-01 09:36:45 +02:00
970e3ed7f1 EUCAST rules for MDRO 2018-04-25 15:33:58 +02:00
a814d82b4b try to support older R versions 2018-04-18 14:50:16 +02:00
2509e2413d MDRO, freq tables, new print format for tibbles 2018-04-18 12:24:54 +02:00
MS Berends
39eb307968
Remove Windows only function 2018-03-23 14:58:46 +01:00
53464ff1c8
- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
2018-03-23 14:46:02 +01:00
dd2517ecb7
- Added new algorithm to determine weighted isolates, can now be points or keyantibiotics, see ?first_isolate`
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
2018-03-19 20:39:23 +01:00
502a44eb25
- Added new function guess_bactid to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
2018-03-19 12:43:22 +01:00
46db3f7b13
import from graphics 2018-03-13 15:40:10 +01:00
04fc3573ec
add barplots 2018-03-13 14:34:10 +01:00
d36a391747
export first_isolate 2018-02-26 12:15:52 +01:00
d8da8daf9a
First CRAN submission edits 2018-02-22 20:48:48 +01:00
ab0503f8b8
abname, logo 2018-02-21 12:10:00 +01:00
62304dc23f
first commit 2018-02-21 11:52:31 +01:00