dr. M.S. (Matthijs) Berends
969a42cc8c
(v2.1.1.9226) update intrinsic_resistant, unit test fixes
2025-03-27 15:20:22 +01:00
dr. M.S. (Matthijs) Berends
8deaf2c8eb
(v2.1.1.9224) skip tests on cran
2025-03-20 23:29:21 +01:00
dr. M.S. (Matthijs) Berends
58d7aa8790
(v2.1.1.9199) fix eucast
2025-03-14 13:43:22 +01:00
dr. M.S. (Matthijs) Berends
861331b1df
(v2.1.1.9196) fix eucast, unit tests
2025-03-13 15:38:39 +01:00
dr. M.S. (Matthijs) Berends
9aab129ea6
(v2.1.1.9195) add BTL-S, fix ranks in unknown microorganisms
2025-03-13 14:30:14 +01:00
dr. M.S. (Matthijs) Berends
a7ef22a21e
(v2.1.1.9194) new argument for missing R breakpoints - updated from WHONET
2025-03-12 16:24:38 +01:00
dr. M.S. (Matthijs) Berends
067a8aca66
(v2.1.1.9192) fix fluoroquinolones and add bleomycin
2025-03-10 17:04:35 +01:00
dr. M.S. (Matthijs) Berends
32024e597a
(v2.1.1.9191) unit tests
2025-03-10 12:16:45 +01:00
dr. M.S. (Matthijs) Berends
245483e41c
(v2.1.1.9188) fix antibiogram plot
2025-03-07 23:01:25 +01:00
dr. M.S. (Matthijs) Berends
f7938289eb
(v2.1.1.9186) replace antibiotics with antimicrobials!
2025-03-07 20:43:26 +01:00
dr. M.S. (Matthijs) Berends
e28dd86c43
(v2.1.1.9183) unit test for older R versions
2025-03-03 14:54:42 +01:00
dr. M.S. (Matthijs) Berends
9a9468fa84
(v2.1.1.9182) fix AMR selectors for tidymodels, add unit tests
2025-03-03 12:59:27 +01:00
dr. M.S. (Matthijs) Berends
07efc292bc
(v2.1.1.9163) cleanup
2025-02-27 14:04:29 +01:00
Matthijs Berends
68efddab3d
unit tests
2025-02-26 22:26:42 +01:00
dr. M.S. (Matthijs) Berends
1a43882583
ab fix
2025-02-26 21:34:07 +01:00
dr. M.S. (Matthijs) Berends
22e66741cc
(v2.1.1.9160) cleanup
2025-02-26 20:28:33 +01:00
dr. M.S. (Matthijs) Berends
0c3ea4b538
(v2.1.1.9159) new approach as.ab()
2025-02-26 19:23:54 +01:00
dr. M.S. (Matthijs) Berends
aa8f6af185
(v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro
2025-02-23 11:18:08 +01:00
dr. M.S. (Matthijs) Berends
671d657fd8
(v2.1.1.9152) MIC plot fix
2025-02-18 08:07:02 +01:00
dr. M.S. (Matthijs) Berends
9650545d6e
(v2.1.1.9150) unit tests
2025-02-15 13:40:51 +01:00
dr. M.S. (Matthijs) Berends
9d636983ac
(v2.1.1.9148) scale fix, antibiogram fix
2025-02-15 12:38:29 +01:00
dr. M.S. (Matthijs) Berends
d94efb0f5e
(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
2025-02-14 14:16:46 +01:00
dr. M.S. (Matthijs) Berends
bd2887bcd4
(v2.1.1.9146) new scale_*_sir() functions
2025-02-13 19:47:57 +01:00
dr. M.S. (Matthijs) Berends
cc2bb151ab
(v2.1.1.9142) unit test fix
2025-02-07 19:03:02 +01:00
dr. M.S. (Matthijs) Berends
8ba2e4ed94
(v2.1.1.9141) new AMR selectors, eucast overwrite arg
2025-02-07 18:01:22 +01:00
dr. M.S. (Matthijs) Berends
baea4323c7
(v2.1.1.9140) WISCA fix
2025-02-05 20:48:35 +01:00
dr. M.S. (Matthijs) Berends
d84033bbcb
(v2.1.1.9139) unit test
2025-02-01 11:10:42 +01:00
dr. M.S. (Matthijs) Berends
6a206bed12
(v2.1.1.9138) unit tests
2025-01-31 23:06:45 +01:00
dr. M.S. (Matthijs) Berends
22afd918e6
(v2.1.1.9136) console colours, updated Suggests, added as.ab() improvement
2025-01-31 16:01:52 +01:00
dr. M.S. (Matthijs) Berends
2561494e06
(v2.1.1.9133) update math formulae
2025-01-27 22:43:35 +01:00
dr. M.S. (Matthijs) Berends
f03933940c
(v2.1.1.9131) implement testthat
2025-01-27 21:43:10 +01:00
dr. M.S. (Matthijs) Berends
1149360b27
(v2.1.1.9129) unit test fix
2025-01-27 16:17:03 +01:00
dr. M.S. (Matthijs) Berends
640888f408
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends
7cda9e575b
prepare for CRAN
2023-10-20 14:51:48 +02:00
dr. M.S. (Matthijs) Berends
7a4628b73f
Added C. freundii complex and Y. pseudotuberculosis complex
2023-07-14 10:49:06 +02:00
dr. M.S. (Matthijs) Berends
fd480d1a9a
console hyperlink fix
2023-07-14 09:50:13 +02:00
dr. M.S. (Matthijs) Berends
ddd01f9410
test to remove unit tests from build
2023-07-13 09:42:37 +01:00
dr. M.S. (Matthijs) Berends
acb534102b
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
dr. M.S. (Matthijs) Berends
9591688811
documentation update
2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends
262598b8d7
support for old rsi arguments
2023-03-11 14:24:34 +01:00
dr. M.S. (Matthijs) Berends
a4cd38c433
fix for R < 3.2, expect_warning() on hold
2023-02-14 10:41:01 +01:00
dr. M.S. (Matthijs) Berends
3396236eef
unit test fixes
2023-02-13 16:56:25 +01:00
dr. M.S. (Matthijs) Berends
1a0dc4bf46
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
dr. M.S. (Matthijs) Berends
822e9de82c
pm update, unit test fix?
2023-02-08 13:48:06 +01:00
dr. M.S. (Matthijs) Berends
4a54d59f70
tinytest
2023-02-06 14:36:31 +01:00
dr. M.S. (Matthijs) Berends
19fd0ef121
sort sir history
2023-01-23 15:01:21 +01:00
dr. M.S. (Matthijs) Berends
f619fb683b
support new mo codes
2022-12-27 15:16:15 +01:00
dr. M.S. (Matthijs) Berends
d20caae54b
cleanup
2022-10-31 13:25:41 +01:00
Dr. Matthijs Berends
cd2acc4a29
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
dr. M.S. (Matthijs) Berends
71db246d5c
unit test fix
2022-08-28 19:17:12 +02:00
