 dr. M.S. (Matthijs) Berends
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85e2fbe4a3
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remove warnings from unit tests
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2022-10-19 11:47:57 +02:00 |
Dr. Matthijs Berends
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85ed7ea5f0
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more robust install check
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2022-10-14 15:45:20 +02:00 |
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dr. M.S. (Matthijs) Berends
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76bcd3528c
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move object assignment to AMR_env
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2022-10-14 13:02:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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b9342d103e
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fix documentation
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2022-10-06 11:33:30 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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63fe160322
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new rsi_interpretation_history
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2022-09-01 15:20:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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c44ddf272f
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fix for R <= 3.3
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2022-08-28 19:34:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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4d050aef7c
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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303d61b473
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new tibble export
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2022-08-27 20:49:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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3864ab2fb8
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Feather and Parquet files
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2022-08-26 22:25:15 +02:00 |
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dr. M.S. (Matthijs) Berends
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4754848e96
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(v1.8.1.9001) update unit tests, fixes #53
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2022-04-08 11:02:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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3b2b2be5f8
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(v1.8.0.9002) as.rsi() cleanup, more informative warnings
|
2022-03-02 15:38:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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578e7dfee9
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(v1.7.1.9070) Better WHONET support
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2021-12-13 10:18:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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e0a2634f14
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(v1.7.1.9065) unit tests
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2021-12-11 15:13:44 +01:00 |
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dr. M.S. (Matthijs) Berends
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77ba4318ea
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(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
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2021-12-11 13:41:31 +01:00 |
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dr. M.S. (Matthijs) Berends
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e18c49ed93
|
(v1.7.1.9063) not_intrinsic_resistant
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2021-12-09 10:48:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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75965124ef
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(v1.7.1.9060) bugfix set_ab_names
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2021-12-05 23:11:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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7965468ccd
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(v1.7.1.9058) vars selection for set_ab_names()
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2021-12-05 22:06:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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9a2c431e16
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(v1.7.1.9053) fortify() methods
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2021-11-01 13:51:13 +01:00 |
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dr. M.S. (Matthijs) Berends
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91149d6d35
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(v1.7.1.9052) eucast-update
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2021-10-06 16:22:36 +02:00 |
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dr. M.S. (Matthijs) Berends
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2bcf28281d
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(v1.7.1.9049) unit tests
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2021-10-05 09:58:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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bcab74fb6d
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(v1.7.1.9037) dplyr grouping fix on windows?
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2021-08-31 17:06:44 +02:00 |
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dr. M.S. (Matthijs) Berends
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986bd826ee
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(v1.7.1.9035) dplyr grouping fix on windows?
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2021-08-30 15:43:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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6ca6a3f6df
|
(v1.7.1.9032) dplyr grouping fix on windows?
|
2021-08-30 14:17:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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e6ce25162e
|
(v1.7.1.9031) dplyr grouping fix on windows?
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2021-08-30 14:07:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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a44283f998
|
(v1.7.1.9024) unit tests
|
2021-08-17 14:34:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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a2d249962f
|
(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
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2021-08-16 21:54:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e1efd902c
|
(v1.7.1.9022) rely on vctrs for ab selectors
|
2021-07-23 21:42:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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fc946564d1
|
(v1.7.1.9019) Morganella MIC in EUCAST 2021
|
2021-07-12 12:28:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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3e26929838
|
(v1.7.1.9009) fix for ab class selectors
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2021-07-03 21:56:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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d04e83f494
|
(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
|
2021-06-22 12:16:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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556bf0014d
|
(v1.7.1.9003) unit test
|
2021-06-14 22:37:05 +02:00 |
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dr. M.S. (Matthijs) Berends
|
1908e7cc7a
|
(v1.7.1.9000) ab_class update, unit tests
|
2021-06-04 21:07:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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f406319503
|
(v1.7.0.9000) package size
|
2021-05-30 22:14:38 +02:00 |
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dr. M.S. (Matthijs) Berends
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ac73a8d849
|
v1.7.0
|
2021-05-24 15:29:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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e5599bc694
|
(v1.6.0.9065) unit tests
|
2021-05-24 11:01:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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4fbf9e1720
|
(v1.6.0.9064) prepare new release
|
2021-05-24 09:34:08 +02:00 |
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dr. M.S. (Matthijs) Berends
|
06302d296a
|
(v1.6.0.9062) code consistency
|
2021-05-24 00:06:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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b210f1327c
|
(v1.6.0.9055) support codecov again
|
2021-05-21 20:20:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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4a2a48b7c1
|
(v1.6.0.9052) unit tests
|
2021-05-20 11:42:39 +02:00 |
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dr. M.S. (Matthijs) Berends
|
9a2879cba9
|
(v1.6.0.9049) unit tests
|
2021-05-20 00:07:27 +02:00 |
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dr. M.S. (Matthijs) Berends
|
2413efd5c1
|
(v1.6.0.9048) ab selectors overhaul
|
2021-05-19 22:55:42 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6920c0be41
|
(v1.6.0.9047) filter_ab_class() fixes
|
2021-05-18 11:29:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
cfb7df823e
|
(v1.6.0.9044) betalactams() selector
|
2021-05-18 00:53:04 +02:00 |
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dr. M.S. (Matthijs) Berends
|
29dbfa2f49
|
(v1.6.0.9021) join functions update
|
2021-05-12 18:15:03 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
0aca719929
|
(v1.6.0.9018) unit tests
|
2021-05-04 15:20:43 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
5679ccdaf9
|
(v1.6.0.9017) extra system codes
|
2021-05-04 12:47:33 +02:00 |
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dr. M.S. (Matthijs) Berends
|
f33e61bac7
|
(v1.6.0.9016) website update and c() fixes
|
2021-05-03 13:06:43 +02:00 |
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dr. M.S. (Matthijs) Berends
|
93683a4ae2
|
(v1.6.0.9010) big first_isolate() update
|
2021-04-26 23:57:37 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
70b803dbb6
|
(v1.6.0.9008) unlike, bugfix for col_mo naming
|
2021-04-23 09:59:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c6289c3fc3
|
(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
|
2021-04-20 10:46:17 +02:00 |
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dr. M.S. (Matthijs) Berends
|
24ac18a99d
|
(v1.6.0.9005) unit test fix
|
2021-04-16 13:24:59 +02:00 |
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dr. M.S. (Matthijs) Berends
|
9842ef9660
|
(v1.6.0.9004) unit test fix
|
2021-04-16 12:02:57 +02:00 |
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dr. M.S. (Matthijs) Berends
|
00d3e437a8
|
(v1.6.0.9003) like() fix
|
2021-04-16 11:41:05 +02:00 |
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dr. M.S. (Matthijs) Berends
|
d277d58475
|
(v1.6.0.9002) R-3.0 installation fix
|
2021-04-12 14:24:40 +02:00 |
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dr. M.S. (Matthijs) Berends
|
6ff5448192
|
(v1.6.0.9001) support Inf for episodes
|
2021-04-12 12:35:13 +02:00 |
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dr. M.S. (Matthijs) Berends
|
7a3139f7cc
|
(v1.6.0.9000) custom EUCAST rules
|
2021-04-07 08:37:42 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
8d6ceb6a15
|
(v1.5.0.9040) removal of isolate_identifier
|
2021-03-08 09:44:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
850c123de7
|
(v1.5.0.9032) All group generics for MICs
|
2021-03-07 13:52:39 +01:00 |
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dr. M.S. (Matthijs) Berends
|
a673407904
|
(v1.5.0.9025) big plot and ggplot generics update
|
2021-02-25 10:33:08 +01:00 |
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dr. M.S. (Matthijs) Berends
|
062c49fca1
|
(v1.5.0.9022) mo properties speed improvement
|
2021-02-21 22:56:35 +01:00 |
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dr. M.S. (Matthijs) Berends
|
5ef8cb41a7
|
(v1.5.0.9021) improve speed of %like%
|
2021-02-21 20:15:09 +01:00 |
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dr. M.S. (Matthijs) Berends
|
601ea7377c
|
(v1.5.0.9019) use functions without loading AMR pkg
|
2021-02-17 10:58:13 +01:00 |
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dr. M.S. (Matthijs) Berends
|
cb404492b2
|
(v1.5.0.9017) unit testing
|
2021-02-08 21:09:36 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
4a84894f79
|
(v1.5.0.9016) only_rsi_columns update, documentation
|
2021-02-08 14:18:42 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8fda473e49
|
(v1.5.0.9015) unit test fix, grouped first isolates
|
2021-02-04 16:48:16 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
2eca8c3f01
|
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
|
2021-02-02 23:57:35 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
20d638c193
|
(v1.5.0.9013) updated tibble printing colours
|
2021-01-28 16:09:30 +01:00 |
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dr. M.S. (Matthijs) Berends
|
331c1f6508
|
(v1.5.0.9012) ampc_cephalosporin_resistance for I
|
2021-01-25 21:58:00 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
286eaa9699
|
(v1.5.0.9010) MDRO vignette update, get_episode for < day
|
2021-01-24 14:48:56 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
1a88caa119
|
(v1.5.0.9009) unit test fixes
|
2021-01-22 10:55:07 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1ba44776a1
|
(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
|
2021-01-22 10:20:41 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
4eab095306
|
(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
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dr. M.S. (Matthijs) Berends
|
bc00470dca
|
(v1.5.0.9001) more informative argument errors
|
2021-01-14 14:41:44 +01:00 |
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dr. M.S. (Matthijs) Berends
|
d014955ce0
|
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
|
2021-01-12 22:08:04 +01:00 |
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dr. M.S. (Matthijs) Berends
|
8d117820b8
|
(v1.4.0.9060) ab class selector fix
|
2021-01-04 13:39:06 +01:00 |
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dr. M.S. (Matthijs) Berends
|
c9de74c81a
|
(v1.4.0.9059) ab class selector fix
|
2021-01-04 12:29:25 +01:00 |
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dr. M.S. (Matthijs) Berends
|
63a4dda467
|
(v1.4.0.9056) subsetting ab class selectors for base R
|
2021-01-03 23:40:05 +01:00 |
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dr. M.S. (Matthijs) Berends
|
526f8afb08
|
(v1.4.0.9052) replaced all sapply's with type-safe vapply's
|
2020-12-28 22:24:33 +01:00 |
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dr. M.S. (Matthijs) Berends
|
8b52f9b1be
|
(v1.4.0.9047) unit tests
|
2020-12-27 00:30:28 +01:00 |
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dr. M.S. (Matthijs) Berends
|
acbd0cf7ca
|
(v1.4.0.9046) get_episode
|
2020-12-27 00:07:00 +01:00 |
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dr. M.S. (Matthijs) Berends
|
291f802be3
|
(v1.4.0.9045) unit tests
|
2020-12-25 00:06:11 +01:00 |
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dr. M.S. (Matthijs) Berends
|
df37584189
|
(v1.4.0.9044) mo tibble printing, mo_shortname() fix
|
2020-12-24 23:29:10 +01:00 |
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dr. M.S. (Matthijs) Berends
|
128ebcfd62
|
(v1.4.0.9043) documentation update
|
2020-12-22 00:51:17 +01:00 |
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dr. M.S. (Matthijs) Berends
|
ee70883246
|
(v1.4.0.9042) auto dark theme website
|
2020-12-21 22:46:29 +01:00 |
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dr. M.S. (Matthijs) Berends
|
81af41da3a
|
(v1.4.0.9041) updates based on review
|
2020-12-17 16:22:25 +01:00 |
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dr. M.S. (Matthijs) Berends
|
203bc20eb0
|
(v1.4.0.9039) more unit tests
|
2020-12-13 20:44:32 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1bdb136b3a
|
(v1.4.0.9032) auto-data guessing for functions
|
2020-12-07 16:06:42 +01:00 |
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dr. M.S. (Matthijs) Berends
|
e03b3c96d3
|
(v1.4.0.9030) as.mo() fix for known lab codes
|
2020-12-03 16:59:04 +01:00 |
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dr. M.S. (Matthijs) Berends
|
4c114ff4b4
|
(v1.4.0.9029) grey background for backticks, like readr pkg
|
2020-12-01 16:59:57 +01:00 |
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dr. M.S. (Matthijs) Berends
|
00447c6dc4
|
git update
|
2020-11-28 22:15:44 +01:00 |
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dr. M.S. (Matthijs) Berends
|
b045b571a6
|
(v1.4.0.9025) is_new_episode()
|
2020-11-23 21:50:27 +01:00 |
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dr. M.S. (Matthijs) Berends
|
363218da7e
|
(v1.4.0.9024) is_new_episode()
|
2020-11-17 16:57:41 +01:00 |
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dr. M.S. (Matthijs) Berends
|
93428415d0
|
(v1.4.0.9022) small bugfix
|
2020-11-16 20:02:20 +01:00 |
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dr. M.S. (Matthijs) Berends
|
deefce9520
|
(v1.4.0.9021) more robust class setting
|
2020-11-16 16:57:55 +01:00 |
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dr. M.S. (Matthijs) Berends
|
68ac39aa7f
|
(v1.4.0.9016) as.rsi() older R versions
|
2020-11-10 19:59:14 +01:00 |
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dr. M.S. (Matthijs) Berends
|
15c732703d
|
(v1.4.0.9015) bugfix
|
2020-11-10 16:35:56 +01:00 |
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dr. M.S. (Matthijs) Berends
|
423879c034
|
(v1.4.0.9012) reference_df fix
|
2020-11-05 01:11:49 +01:00 |
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dr. M.S. (Matthijs) Berends
|
5a607abb36
|
(v1.4.0.9011) message formatting
|
2020-10-27 15:56:51 +01:00 |