 dr. M.S. (Matthijs) Berends
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ddae8085e1
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(v1.4.0.9002) bugfix
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2020-10-19 20:44:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e9ccb4435
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(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
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2020-10-19 17:09:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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28e77680c5
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(v1.4.0) matching score update
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2020-10-08 11:16:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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baf510183c
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(v1.3.0.9038) prefinal 1.4.0
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2020-10-04 19:26:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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050a9a04fb
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(v1.3.0.9030) matching score update
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2020-09-26 16:26:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e40e42011
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(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
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2020-09-18 16:05:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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7b6dd676f7
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(v1.3.0.9018) language corrections
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2020-09-14 12:21:23 +02:00 |
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dr. M.S. (Matthijs) Berends
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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5e45fdcf2a
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(v1.3.0.9007) tibble printing
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2020-08-26 11:33:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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c8c8bb4e3a
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(v1.3.0.9006) website update
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2020-08-21 11:40:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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09fba38ea6
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(v1.2.0.9035) as.mo() speed improvement
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2020-07-22 10:24:23 +02:00 |
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dr. M.S. (Matthijs) Berends
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6ab468362d
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(v1.2.0.9034) code cleaning
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2020-07-13 09:17:24 +02:00 |
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dr. M.S. (Matthijs) Berends
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76fc8e1b14
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(v1.2.0.9026) move to github
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2020-07-08 14:48:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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93a158aebd
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(v1.2.0.9011) mo_domain(), improved error handling
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2020-06-22 11:18:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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86d44054f0
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(v1.1.0.9020) updated taxonomy
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2020-05-27 16:37:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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ae1969b941
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(v1.1.0.9019) mo_source fix
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2020-05-25 01:01:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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7f3da74b17
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(v1.1.0.9004) lose dependencies
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2020-05-16 13:05:47 +02:00 |
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dr. M.S. (Matthijs) Berends
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b040185269
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(v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI
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2020-04-29 14:33:44 +02:00 |
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dr. M.S. (Matthijs) Berends
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9b8b02960e
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(v0.9.0.9023) EUCAST 2020 guidelines
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2020-02-14 19:54:13 +01:00 |
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dr. M.S. (Matthijs) Berends
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a13c62e6e8
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(v0.9.0.9016) Support SNOMED codes
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2020-01-27 19:14:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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ced1a7b7fa
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(v0.9.0.9008) Happy new year! Add lifecycles
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2020-01-05 17:22:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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56ce9bf665
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(v0.9.0) website fixes
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2019-11-30 12:01:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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c5f00f4a9f
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(v0.8.0.9036) complete documentation rewrite
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2019-11-28 22:32:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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7c28b392b1
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(v0.8.0.9035) add more mo codes
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2019-11-24 22:48:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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e53cc4990c
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(v0.8.0.9034) add cid to antivirals
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2019-11-23 12:39:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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09c4b04cd0
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(v0.8.0.9007) Enterobacterales order
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2019-10-30 23:02:50 +01:00 |
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dr. M.S. (Matthijs) Berends
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00cdb498a0
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(v0.7.1.9102) lintr
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2019-10-11 17:21:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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3596adb295
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(v0.7.1.9076) mo codes
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2019-09-20 12:33:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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398c5bdc4f
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(v0.7.1.9073) as.mo() self-learning algorithm
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2019-09-15 22:57:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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13d4fef801
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(v0.7.1.9061) mo_property improvement
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2019-08-26 10:03:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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1d423cca89
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(v0.7.1.9035) cephalosporins and unit tests
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2019-08-11 19:07:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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6a349bf757
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(v0.7.1.9032) eucast_rules() improvements
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2019-08-09 14:28:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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90c874025a
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(v0.7.1.9027) tibble printing
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2019-08-07 15:37:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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68230d0712
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(v0.7.1.90012) mo_shortname fix
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2019-07-10 21:36:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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b15d59cf03
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(v0.7.1.9009) note for WHOCC
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2019-07-09 11:22:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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156d550895
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(v0.7.1.9005) new rsi calculations, atc class removal
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2019-07-01 14:03:15 +02:00 |
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dr. M.S. (Matthijs) Berends
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65c6702b21
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(v0.7.1.9004) atc class removal
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2019-06-27 11:57:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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c9156c004a
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(v0.7.0.9013) mo_synonym fix
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2019-06-22 14:49:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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9c39c35f86
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(v0.7.0.9010) mo_synonyms, plot/barplot fixes
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2019-06-16 21:42:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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8f674e19bb
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(v0.7.0.9005) ab algorithm update
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2019-06-11 14:18:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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f02679fb63
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(v0.7.0.9001) new pathovars, small fixes
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2019-06-07 22:47:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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2667fff8a7
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(v0.6.1.9050) support staged install
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2019-06-01 20:40:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ed27c7e7a
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(v0.6.1.9046) ggplot fix
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2019-05-31 20:25:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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27380fa021
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fixes for microorganisms.codes
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2019-05-28 16:50:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ca00e1868
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speed improvement eucast_rules(), support more old MO codes
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2019-05-20 12:00:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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0dc0715dc6
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CI tests
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2019-05-13 12:21:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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68cc7ef0d0
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new antibiotics
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2019-05-10 16:44:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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cffb7787d8
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cfta streptococci
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2019-04-09 10:34:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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fbc9191b13
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new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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dr. M.S. (Matthijs) Berends
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29f444543d
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added Becker 2019
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2019-03-26 14:24:03 +01:00 |
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dr. M.S. (Matthijs) Berends
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c6a12266e7
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DSMZ data
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2019-03-18 14:29:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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b319b89750
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WHONET fix
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2019-03-09 08:21:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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e835525cf6
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unknown codes, rsi fix
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2019-03-02 22:47:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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2565b60024
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rlang dependency, new fungi
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2019-02-28 13:56:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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4ba2ff68e0
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language fix
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2019-02-26 13:02:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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f9ded23023
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as.mo improvement
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2019-02-26 12:33:26 +01:00 |
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dr. M.S. (Matthijs) Berends
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c506d2893b
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as.mo improvements
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2019-02-25 15:52:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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0ec76cfa98
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as.mo improvement
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2019-02-25 10:42:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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41ad7a22c8
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mo_rank mo_url, added Tremellales
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2019-02-22 22:12:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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68a9a35ed6
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algorithm update
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2019-02-21 18:55:52 +01:00 |
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dr. M.S. (Matthijs) Berends
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fb1fc3686c
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Catalogue of life
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2019-02-20 00:04:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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54f8258f8c
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Catalogue of Life, replaces ITIS
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2019-02-18 02:33:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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ed30312048
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mo codes for WHONET
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2019-02-08 16:06:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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5aad26035c
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edited g.test
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2019-01-12 11:06:58 +01:00 |
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dr. M.S. (Matthijs) Berends
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193a2d2863
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EUCAST update, as.mo bugfix for empty vlaues
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2019-01-08 16:23:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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6b2d464f8c
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big website update, licence txt update
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2019-01-02 23:24:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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b937662a97
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limits for scale_y_percent - Licence update
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2018-12-16 22:45:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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01a6d56334
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add kingdom to mo_taxonomy
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2018-12-10 21:47:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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60fe98bbbd
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better as.mo handling
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2018-12-06 14:36:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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6b0f4ffbd4
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new kingdom
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2018-11-09 13:11:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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d07e9b904e
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new function get_locale
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2018-11-05 13:20:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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9cd4ab928a
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speed improvement as.mo, freq title
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2018-10-31 12:10:49 +01:00 |
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dr. M.S. (Matthijs) Berends
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67521394f6
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more unit tests
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2018-10-09 15:41:44 +02:00 |
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dr. M.S. (Matthijs) Berends
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95c9fdc552
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CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
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2018-10-09 13:53:33 +02:00 |
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dr. M.S. (Matthijs) Berends
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ed17db0263
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renamed year columns to ref
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2018-10-01 14:44:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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3119a221e5
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authors from ITIS, diff for freq
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2018-10-01 11:39:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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92c9cc2608
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diff for freq, fix for mo_shortname
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2018-09-29 21:54:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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2b0080995e
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speed improvement for as.mo, more old taxonomic names
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2018-09-27 23:23:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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450992baea
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new: 1680 old taxonomic names
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2018-09-25 16:44:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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9c566585b0
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first inclusion of ITIS data
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2018-09-24 23:33:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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5d80cef338
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added taxonomic data from ITIS
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2018-09-17 20:53:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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db14781593
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add labels_rsi_count
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2018-09-16 22:11:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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b792a2754e
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added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
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2018-09-16 16:43:29 +02:00 |
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dr. M.S. (Matthijs) Berends
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d049ec9e69
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ggplot2_rsi fix
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2018-09-13 14:48:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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cb0d74a4f0
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support for French and Italian, added quote to freq
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2018-09-10 15:45:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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b83e6a9380
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algoritm improvement, removed all Catabacter except for C. hongkongensis
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2018-09-10 11:40:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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4816419f0c
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AI improvements for microorganisms
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2018-09-09 12:11:44 +02:00 |
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dr. M.S. (Matthijs) Berends
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936198372e
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translate CoNS
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2018-09-08 16:24:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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26f5be0033
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support for portuguese, language determination based on system
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2018-09-08 16:06:47 +02:00 |
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dr. M.S. (Matthijs) Berends
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de36b0be23
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fix for empty values in mo_property
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2018-09-05 12:21:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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e39a9a8b05
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added mo_shortname
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2018-09-05 10:51:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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b388e3fee7
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Support for German and Spanish microorganism properties, cleanup
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2018-09-04 11:33:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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5965d3c794
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replaced bactid by mo
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2018-08-31 13:36:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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972fc4f6c7
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ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid
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2018-08-28 13:51:13 +02:00 |