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6b0f4ffbd4
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new kingdom
|
2018-11-09 13:11:54 +01:00 |
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9be5e0318b
|
freq: fix na.rm in groups
|
2018-11-08 16:10:03 +01:00 |
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84e08f516a
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grouping var for freq
|
2018-11-06 16:41:59 +01:00 |
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ee664f2a4c
|
small fix
|
2018-11-05 15:36:07 +01:00 |
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d15bb2ab3f
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read_4D
|
2018-11-05 15:30:49 +01:00 |
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d07e9b904e
|
new function get_locale
|
2018-11-05 13:20:32 +01:00 |
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d0bc05e5b1
|
speed improvement is.rsi.eligible
|
2018-11-02 14:55:29 +01:00 |
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40a159e78d
|
more unit tests
|
2018-11-02 10:27:57 +01:00 |
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e601fd259a
|
test syntax fix
|
2018-11-01 20:50:10 +01:00 |
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5476fecc73
|
eucast update
|
2018-11-01 20:23:33 +01:00 |
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f7687557c9
|
eucast updates
|
2018-11-01 17:06:08 +01:00 |
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9cd4ab928a
|
speed improvement as.mo, freq title
|
2018-10-31 12:10:49 +01:00 |
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1bf8dc2983
|
as.mo speedup: assigned to namespace
|
2018-10-29 17:26:17 +01:00 |
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707aa20a37
|
fixes
|
2018-10-23 14:59:36 +02:00 |
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7997de6a6d
|
mdro and 1st isolate improvements
|
2018-10-23 11:15:05 +02:00 |
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299c5bea43
|
na freq, removed factors
|
2018-10-23 09:42:26 +02:00 |
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9c56257da1
|
freq - print title bold in markdown
|
2018-10-22 13:06:54 +02:00 |
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c2a93b46db
|
breaks param, tidyr dep change, freq markdown
|
2018-10-22 12:32:59 +02:00 |
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ec15b82fd6
|
param header for freq
|
2018-10-19 21:52:08 +02:00 |
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86b03577a7
|
fix for as.mo, added also_single_tested
|
2018-10-19 13:53:31 +02:00 |
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|
032c0d51ef
|
better verbose in EUCAST
|
2018-10-19 00:57:10 +02:00 |
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b464dd524a
|
new verbose
|
2018-10-19 00:17:03 +02:00 |
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0ef91be3ac
|
param rules for EUCAST
|
2018-10-18 12:10:10 +02:00 |
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|
693f64bdbf
|
new EUCAST rules: clinical breakpoints
|
2018-10-17 17:32:34 +02:00 |
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|
d5a41de711
|
parameter combine_IR
|
2018-10-16 09:59:31 +02:00 |
|
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|
5b5b95a47b
|
count_all and some fixes
|
2018-10-12 16:35:18 +02:00 |
|
|
|
e7d937d36e
|
update NEWS
|
2018-10-10 10:50:19 +02:00 |
|
|
|
67521394f6
|
more unit tests
|
2018-10-09 15:41:44 +02:00 |
|
|
|
95c9fdc552
|
CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
|
2018-10-09 13:53:33 +02:00 |
|
|
|
6d761436f7
|
benchmarks on readme and speed improvement for direct mo codes
|
2018-10-01 16:26:02 +02:00 |
|
|
|
ed17db0263
|
renamed year columns to ref
|
2018-10-01 14:44:40 +02:00 |
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|
3119a221e5
|
authors from ITIS, diff for freq
|
2018-10-01 11:39:43 +02:00 |
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|
92c9cc2608
|
diff for freq, fix for mo_shortname
|
2018-09-29 21:54:32 +02:00 |
|
|
|
a6aa9e95fb
|
completed old taxonomic names
|
2018-09-28 20:13:13 +02:00 |
|
|
|
768fe17324
|
removed clipboard functions as it violated CRAN policies
|
2018-09-28 16:05:18 +02:00 |
|
|
|
2b0080995e
|
speed improvement for as.mo, more old taxonomic names
|
2018-09-27 23:23:48 +02:00 |
|
|
|
450992baea
|
new: 1680 old taxonomic names
|
2018-09-25 16:44:40 +02:00 |
|
|
|
9c566585b0
|
first inclusion of ITIS data
|
2018-09-24 23:33:29 +02:00 |
|
|
|
5d80cef338
|
added taxonomic data from ITIS
|
2018-09-17 20:53:32 +02:00 |
|
|
|
7680e4edd8
|
add shortest and longest to freq for characters
|
2018-09-17 09:42:09 +02:00 |
|
|
|
db14781593
|
add labels_rsi_count
|
2018-09-16 22:11:17 +02:00 |
|
|
|
b792a2754e
|
added prevalence column and alterted as.mo algorith to use it, added ab_name as alias
|
2018-09-16 16:43:29 +02:00 |
|
|
|
b0ca49d68d
|
small improvement for is.rsi.eligible, more unit tests
|
2018-09-14 11:54:01 +02:00 |
|
|
|
cf5711fb0b
|
algorithm improvement
|
2018-09-14 10:31:21 +02:00 |
|
|
|
d049ec9e69
|
ggplot2_rsi fix
|
2018-09-13 14:48:34 +02:00 |
|
|
|
cb0d74a4f0
|
support for French and Italian, added quote to freq
|
2018-09-10 15:45:25 +02:00 |
|
|
|
b83e6a9380
|
algoritm improvement, removed all Catabacter except for C. hongkongensis
|
2018-09-10 11:40:54 +02:00 |
|
|
|
4816419f0c
|
AI improvements for microorganisms
|
2018-09-09 12:11:44 +02:00 |
|
|
|
936198372e
|
translate CoNS
|
2018-09-08 16:24:12 +02:00 |
|
|
|
26f5be0033
|
support for portuguese, language determination based on system
|
2018-09-08 16:06:47 +02:00 |
|
