Commit Graph

41 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends 641b88c814 website update 2022-03-27 09:37:55 +02:00
dr. M.S. (Matthijs) Berends 0fb9a1b194 prerelease 1.8.1 2022-03-14 16:43:15 +01:00
dr. M.S. (Matthijs) Berends 45e9546538 prerelease 1.8.1
Merge branch 'development' of https://github.com/msberends/AMR into development

# Conflicts:
#	docs/articles/AMR.html
#	docs/articles/AMR_files/figure-html/disk_plots-1.png
#	docs/articles/AMR_files/figure-html/disk_plots_mo_ab-1.png
#	docs/articles/AMR_files/figure-html/mic_plots-1.png
#	docs/articles/AMR_files/figure-html/mic_plots-2.png
#	docs/articles/AMR_files/figure-html/mic_plots_mo_ab-1.png
#	docs/articles/AMR_files/figure-html/mic_plots_mo_ab-2.png
#	docs/articles/AMR_files/figure-html/plot 1-1.png
#	docs/articles/AMR_files/figure-html/plot 3-1.png
#	docs/articles/AMR_files/figure-html/plot 4-1.png
#	docs/articles/AMR_files/figure-html/plot 5-1.png
#	docs/articles/EUCAST.html
#	docs/articles/MDR.html
#	docs/articles/PCA.html
#	docs/articles/PCA_files/figure-html/unnamed-chunk-6-1.png
#	docs/articles/PCA_files/figure-html/unnamed-chunk-7-1.png
#	docs/articles/SPSS.html
#	docs/articles/WHONET.html
#	docs/articles/WHONET_files/figure-html/unnamed-chunk-7-1.png
#	docs/articles/benchmarks.html
#	docs/articles/benchmarks_files/figure-html/unnamed-chunk-4-1.png
#	docs/articles/datasets.html
#	docs/articles/resistance_predict.html
#	docs/articles/resistance_predict_files/figure-html/unnamed-chunk-4-1.png
#	docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-1.png
#	docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-2.png
#	docs/articles/resistance_predict_files/figure-html/unnamed-chunk-6-1.png
#	docs/articles/resistance_predict_files/figure-html/unnamed-chunk-7-1.png
#	docs/articles/welcome_to_AMR.html
#	docs/news/index.html
#	docs/pkgdown.yml
#	docs/reference/AMR-deprecated.html
#	docs/reference/AMR.html
#	docs/reference/WHOCC.html
#	docs/reference/WHONET.html
#	docs/reference/antibiotics.html
#	docs/reference/catalogue_of_life.html
#	docs/reference/catalogue_of_life_version.html
#	docs/reference/dosage.html
#	docs/reference/example_isolates.html
#	docs/reference/example_isolates_unclean.html
#	docs/reference/g.test.html
#	docs/reference/intrinsic_resistant.html
#	docs/reference/microorganisms.codes.html
#	docs/reference/microorganisms.html
#	docs/reference/microorganisms.old.html
#	docs/reference/rsi_translation.html
2022-03-14 16:37:37 +01:00
dr. M.S. (Matthijs) Berends 1b0983e382 (v1.8.1) prerelease 1.8.1 2022-03-14 16:36:10 +01:00
dr. M.S. (Matthijs) Berends 8c9feea087 website update 2022-03-12 19:53:29 +01:00
dr. M.S. (Matthijs) Berends 25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
dr. M.S. (Matthijs) Berends 1e66a3daf3 (v1.7.1.9068) new logo, unit tests 2021-12-12 11:07:02 +01:00
dr. M.S. (Matthijs) Berends e63defe324 (v1.7.1.9062) website update 2021-12-06 11:12:30 +01:00
dr. M.S. (Matthijs) Berends 37e6e35ec4 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
dr. M.S. (Matthijs) Berends d6a916d70b (v1.7.1.9030) unit test 2021-08-29 23:50:45 +02:00
dr. M.S. (Matthijs) Berends a44283f998 (v1.7.1.9024) unit tests 2021-08-17 14:34:11 +02:00
dr. M.S. (Matthijs) Berends a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
dr. M.S. (Matthijs) Berends 4e1efd902c (v1.7.1.9022) rely on vctrs for ab selectors 2021-07-23 21:42:11 +02:00
dr. M.S. (Matthijs) Berends 7e70403efb (v1.7.1) New CRAN release 2021-06-03 15:19:21 +02:00
dr. M.S. (Matthijs) Berends ac73a8d849 v1.7.0 2021-05-24 15:29:17 +02:00
dr. M.S. (Matthijs) Berends c5fff1c95c (v1.6.0.9011) unit tests 2021-04-27 10:27:13 +02:00
dr. M.S. (Matthijs) Berends d3f007bf65 (v1.4.0.9053) unit test old R versions 2020-12-29 21:23:01 +01:00
dr. M.S. (Matthijs) Berends acbd0cf7ca (v1.4.0.9046) get_episode 2020-12-27 00:07:00 +01:00
dr. M.S. (Matthijs) Berends df37584189 (v1.4.0.9044) mo tibble printing, mo_shortname() fix 2020-12-24 23:29:10 +01:00
dr. M.S. (Matthijs) Berends ee70883246 (v1.4.0.9042) auto dark theme website 2020-12-21 22:46:29 +01:00
dr. M.S. (Matthijs) Berends 2145f1d1ba (v1.4.0.9033) documentation update 2020-12-08 12:37:25 +01:00
dr. M.S. (Matthijs) Berends 760d69a3e0 (v1.4.0.9008) like variations 2020-10-26 12:23:03 +01:00
dr. M.S. (Matthijs) Berends 28e77680c5 (v1.4.0) matching score update 2020-10-08 11:16:03 +02:00
dr. M.S. (Matthijs) Berends baf510183c (v1.3.0.9038) prefinal 1.4.0 2020-10-04 19:26:43 +02:00
dr. M.S. (Matthijs) Berends 68e9cb78e9 (v1.3.0.9015) as.mo() speedup for valid taxonomic names 2020-09-03 20:59:21 +02:00
dr. M.S. (Matthijs) Berends c8c8bb4e3a (v1.3.0.9006) website update 2020-08-21 11:40:13 +02:00
dr. M.S. (Matthijs) Berends 818d0441e0 (v1.3.0.9005) website update 2020-08-17 21:49:58 +02:00
dr. M.S. (Matthijs) Berends 08d62bb5d5 (v1.3.0.9002) intrinsic_resistant data set 2020-08-14 13:36:10 +02:00
dr. M.S. (Matthijs) Berends 7d16bec21f (v1.3.0.9001) website update 2020-08-10 12:46:03 +02:00
dr. M.S. (Matthijs) Berends 8ff46eefe9 (v1.3.0) small MIC fix 2020-07-30 12:37:01 +02:00
dr. M.S. (Matthijs) Berends 453f7f210b (v1.2.0.9038) CLSI 2019 fix 2020-07-29 10:33:47 +02:00
dr. M.S. (Matthijs) Berends 1b65d76cfb (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
dr. M.S. (Matthijs) Berends 7baa9d3658 (v1.2.0.9030) GitHub Actions 2020-07-09 14:12:11 +02:00
dr. M.S. (Matthijs) Berends b44e2c9202 v1.2.0 2020-05-28 16:48:55 +02:00
dr. M.S. (Matthijs) Berends d9a4b0bcaf (v1.1.0.9021) 1st isolates update 2020-05-28 10:51:56 +02:00
dr. M.S. (Matthijs) Berends ae1969b941 (v1.1.0.9019) mo_source fix 2020-05-25 01:01:14 +02:00
dr. M.S. (Matthijs) Berends e0f4c93e82 v1.1.0 2020-04-17 19:16:30 +02:00
dr. M.S. (Matthijs) Berends c2ffbd9f95 (v1.0.1.9009) prepare for next release 2020-04-15 11:30:28 +02:00
dr. M.S. (Matthijs) Berends d1cb7d3b6f (v1.0.1.9005) as.mo() improvements 2020-04-13 21:09:56 +02:00
dr. M.S. (Matthijs) Berends 219cff403f (v1.0.1.9004) Support dplyr 1.0.0 2020-03-14 14:05:43 +01:00
dr. M.S. (Matthijs) Berends fa0d9c58d9 (v1.0.1.9000) first PCA implementation 2020-03-07 21:48:21 +01:00