 dr. M.S. (Matthijs) Berends
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6de5375256
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(v1.8.1.9007) website update
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2022-05-11 10:10:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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641b88c814
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website update
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2022-03-27 09:37:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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0fb9a1b194
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prerelease 1.8.1
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2022-03-14 16:43:15 +01:00 |
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dr. M.S. (Matthijs) Berends
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45e9546538
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prerelease 1.8.1
Merge branch 'development' of https://github.com/msberends/AMR into development
# Conflicts:
# docs/articles/AMR.html
# docs/articles/AMR_files/figure-html/disk_plots-1.png
# docs/articles/AMR_files/figure-html/disk_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots-1.png
# docs/articles/AMR_files/figure-html/mic_plots-2.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-1.png
# docs/articles/AMR_files/figure-html/mic_plots_mo_ab-2.png
# docs/articles/AMR_files/figure-html/plot 1-1.png
# docs/articles/AMR_files/figure-html/plot 3-1.png
# docs/articles/AMR_files/figure-html/plot 4-1.png
# docs/articles/AMR_files/figure-html/plot 5-1.png
# docs/articles/EUCAST.html
# docs/articles/MDR.html
# docs/articles/PCA.html
# docs/articles/PCA_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/PCA_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/SPSS.html
# docs/articles/WHONET.html
# docs/articles/WHONET_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/benchmarks.html
# docs/articles/benchmarks_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/datasets.html
# docs/articles/resistance_predict.html
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-4-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-5-2.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-6-1.png
# docs/articles/resistance_predict_files/figure-html/unnamed-chunk-7-1.png
# docs/articles/welcome_to_AMR.html
# docs/news/index.html
# docs/pkgdown.yml
# docs/reference/AMR-deprecated.html
# docs/reference/AMR.html
# docs/reference/WHOCC.html
# docs/reference/WHONET.html
# docs/reference/antibiotics.html
# docs/reference/catalogue_of_life.html
# docs/reference/catalogue_of_life_version.html
# docs/reference/dosage.html
# docs/reference/example_isolates.html
# docs/reference/example_isolates_unclean.html
# docs/reference/g.test.html
# docs/reference/intrinsic_resistant.html
# docs/reference/microorganisms.codes.html
# docs/reference/microorganisms.html
# docs/reference/microorganisms.old.html
# docs/reference/rsi_translation.html
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2022-03-14 16:37:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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1b0983e382
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(v1.8.1) prerelease 1.8.1
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2022-03-14 16:36:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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8c9feea087
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website update
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2022-03-12 19:53:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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08d387b5ce
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(v1.8.0.9005) as.rsi() fix
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2022-03-10 19:33:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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ad82bb4ce0
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(v1.8.0.9004) MIC printing in tibbles
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2022-03-03 21:11:02 +01:00 |
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dr. M.S. (Matthijs) Berends
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18e8525d10
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(v1.8.0.9001) as.mo improvement, fixes #52
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2022-02-26 21:58:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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dr. M.S. (Matthijs) Berends
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1e66a3daf3
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(v1.7.1.9068) new logo, unit tests
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2021-12-12 11:07:02 +01:00 |
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dr. M.S. (Matthijs) Berends
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e63defe324
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(v1.7.1.9062) website update
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2021-12-06 11:12:30 +01:00 |
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dr. M.S. (Matthijs) Berends
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7965468ccd
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(v1.7.1.9058) vars selection for set_ab_names()
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2021-12-05 22:06:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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694cf5ba77
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(v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup
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2021-11-28 23:01:26 +01:00 |
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dr. M.S. (Matthijs) Berends
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37e6e35ec4
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(v1.7.1.9051) updated taxonomy, updated git branch name
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2021-10-06 13:23:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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d6a916d70b
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(v1.7.1.9030) unit test
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2021-08-29 23:50:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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a44283f998
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(v1.7.1.9024) unit tests
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2021-08-17 14:34:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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a2d249962f
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(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
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2021-08-16 21:54:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e1efd902c
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(v1.7.1.9022) rely on vctrs for ab selectors
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2021-07-23 21:42:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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7e70403efb
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(v1.7.1) New CRAN release
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2021-06-03 15:19:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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bef0f42f66
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(v1.7.0.9001) CLSI 2020 guideline
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2021-06-01 15:33:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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ac73a8d849
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v1.7.0
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2021-05-24 15:29:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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b210f1327c
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(v1.6.0.9055) support codecov again
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2021-05-21 20:20:51 +02:00 |
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dr. M.S. (Matthijs) Berends
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29dbfa2f49
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(v1.6.0.9021) join functions update
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2021-05-12 18:15:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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c5fff1c95c
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(v1.6.0.9011) unit tests
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2021-04-27 10:27:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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4a84894f79
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(v1.5.0.9016) only_rsi_columns update, documentation
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2021-02-08 14:18:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
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2021-02-02 23:57:35 +01:00 |
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dr. M.S. (Matthijs) Berends
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1ba44776a1
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(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
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2021-01-22 10:20:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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4eab095306
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(v1.5.0.9006) major documentation update
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2021-01-18 16:57:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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d3f007bf65
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(v1.4.0.9053) unit test old R versions
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2020-12-29 21:23:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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acbd0cf7ca
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(v1.4.0.9046) get_episode
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2020-12-27 00:07:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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df37584189
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(v1.4.0.9044) mo tibble printing, mo_shortname() fix
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2020-12-24 23:29:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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128ebcfd62
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(v1.4.0.9043) documentation update
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2020-12-22 00:51:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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ee70883246
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(v1.4.0.9042) auto dark theme website
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2020-12-21 22:46:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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2145f1d1ba
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(v1.4.0.9033) documentation update
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2020-12-08 12:37:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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e03b3c96d3
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(v1.4.0.9030) as.mo() fix for known lab codes
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2020-12-03 16:59:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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4c114ff4b4
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(v1.4.0.9029) grey background for backticks, like readr pkg
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2020-12-01 16:59:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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0800d33228
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(v1.4.0.9023) unit tests
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2020-11-17 11:53:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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deefce9520
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(v1.4.0.9021) more robust class setting
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2020-11-16 16:57:55 +01:00 |
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dr. M.S. (Matthijs) Berends
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833a1be36d
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(v1.4.0.9000) more extensive unit tests
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2020-10-15 09:46:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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28e77680c5
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(v1.4.0) matching score update
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2020-10-08 11:16:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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baf510183c
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(v1.3.0.9038) prefinal 1.4.0
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2020-10-04 19:26:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e0374af29
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(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
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2020-09-29 23:35:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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c19095a3d5
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(v1.3.0.9026) eucast expert rules 3.2
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2020-09-24 00:30:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e40e42011
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(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
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2020-09-18 16:05:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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3ff871afeb
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(v1.3.0.9016) mo_uncertainties() overhaul
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2020-09-12 08:49:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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68e9cb78e9
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(v1.3.0.9015) as.mo() speedup for valid taxonomic names
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2020-09-03 20:59:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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c8c8bb4e3a
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(v1.3.0.9006) website update
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2020-08-21 11:40:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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08d62bb5d5
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(v1.3.0.9002) intrinsic_resistant data set
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2020-08-14 13:36:10 +02:00 |